BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024931
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methy...   415   e-113
ref|XP_002511789.1| dimethyladenosine transferase, putative [Ric...   403   e-110
ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arab...   402   e-109
ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methy...   400   e-109
ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protei...   400   e-109

>ref|XP_002270274.1| PREDICTED: ribosomal RNA small subunit methyltransferase A [Vitis
            vinifera] gi|296089082|emb|CBI38785.3| unnamed protein
            product [Vitis vinifera]
          Length = 335

 Score =  415 bits (1067), Expect = e-113
 Identities = 211/290 (72%), Positives = 237/290 (81%), Gaps = 1/290 (0%)
 Frame = -1

Query: 1192 NEDDYYATLKALNSKGRTPRKSLGQHYMLNSSINEQLVGAADVKEGDVVLEIGPGTGSLT 1013
            ++DDY+ATL ALNSKGRTPRKSLGQHYMLNSSINEQL   AD+++GDV+LEIGPGTGSLT
Sbjct: 45   SQDDYHATLDALNSKGRTPRKSLGQHYMLNSSINEQLADTADIRDGDVILEIGPGTGSLT 104

Query: 1012 NVLVDSGATVLAIEKDPYMAELVRERFASAENVKVLQEDFTRCHVRSHLLPYLEGKLLDR 833
            NVL+D+GATVLAIEKD +MA LVRERFA  + +KVLQEDF +CH+  HL   LE K    
Sbjct: 105  NVLLDAGATVLAIEKDAHMAALVRERFAVTDRLKVLQEDFMKCHIHPHLFSLLESKKAKN 164

Query: 832  SPQR-AKVVSNLPFNISTDVVKFLLPMGDIFSXXXXXXXXXXXXXXVDPSLRTSEYRPIN 656
               R AKVVSN+PFNISTDVVK LLPMGDIFS              V+ SLRT EYRPIN
Sbjct: 165  KESRYAKVVSNIPFNISTDVVKILLPMGDIFSEVVLLLQDETALRLVEASLRTQEYRPIN 224

Query: 655  IFINFYSDPEYKLNVPRTNFFPQPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNG 476
            IF+NFYSDPEYK  VPRTNFFPQP VDAA+V F+LKQAVDYP VSS KSFFS+VNSAFNG
Sbjct: 225  IFVNFYSDPEYKFKVPRTNFFPQPNVDAAVVVFKLKQAVDYPPVSSIKSFFSLVNSAFNG 284

Query: 475  KRKMLRKSLQHIRSSSEIEEALTNMNLPATSRPEELTIEDFVSLHSAIVK 326
            KRKMLR+SLQHI +S EIEEAL N+ LPATSRPEELT++DFV LH+ IVK
Sbjct: 285  KRKMLRRSLQHICTSIEIEEALRNVGLPATSRPEELTLDDFVRLHNLIVK 334


>ref|XP_002511789.1| dimethyladenosine transferase, putative [Ricinus communis]
            gi|223548969|gb|EEF50458.1| dimethyladenosine
            transferase, putative [Ricinus communis]
          Length = 338

 Score =  403 bits (1035), Expect = e-110
 Identities = 203/311 (65%), Positives = 243/311 (78%), Gaps = 1/311 (0%)
 Frame = -1

Query: 1255 TNKGLIVRAANRAKAEAKPRGNEDDYYATLKALNSKGRTPRKSLGQHYMLNSSINEQLVG 1076
            +  G+      R       + + DDY ATLKALNS+GR PRKSLGQHYMLNS +NEQLV 
Sbjct: 27   SRNGITSARKKRVLIRCDTKRSSDDYRATLKALNSRGRRPRKSLGQHYMLNSEVNEQLVC 86

Query: 1075 AADVKEGDVVLEIGPGTGSLTNVLVDSGATVLAIEKDPYMAELVRERFASAENVKVLQED 896
            AA+V+EGD+VLEIGPGTGSLTN+L+D+GATVLAIEKD +MA +VRERF+  +  K+LQED
Sbjct: 87   AANVEEGDLVLEIGPGTGSLTNLLLDTGATVLAIEKDAHMAAIVRERFSHTDRFKLLQED 146

Query: 895  FTRCHVRSHLLPYLEGKL-LDRSPQRAKVVSNLPFNISTDVVKFLLPMGDIFSXXXXXXX 719
            F +CH+R H+L  LE    L+  P+RAKVV+N+PFNISTDVVK LLPMGDI S       
Sbjct: 147  FVKCHIRFHMLSLLENMTSLNEKPRRAKVVANIPFNISTDVVKQLLPMGDIISEVALLLQ 206

Query: 718  XXXXXXXVDPSLRTSEYRPINIFINFYSDPEYKLNVPRTNFFPQPKVDAAIVAFRLKQAV 539
                   V+ SLRTSEYRPIN+F+NFYSDP YK  VPR+NFFPQP VDAA+V F+LKQ  
Sbjct: 207  EETASRLVESSLRTSEYRPINVFVNFYSDPVYKFKVPRSNFFPQPNVDAAVVTFKLKQTA 266

Query: 538  DYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHIRSSSEIEEALTNMNLPATSRPEELTIE 359
            DYPAVSS+KSFFS+VNSAFNGKRKMLR+SLQHI +S EIE+AL N+ LPATSRPEELT++
Sbjct: 267  DYPAVSSSKSFFSLVNSAFNGKRKMLRRSLQHICTSPEIEQALINVGLPATSRPEELTLD 326

Query: 358  DFVSLHSAIVK 326
            DFV LH+ I +
Sbjct: 327  DFVKLHNLIAR 337


>ref|XP_002889349.1| hypothetical protein ARALYDRAFT_470090 [Arabidopsis lyrata subsp.
            lyrata] gi|297335191|gb|EFH65608.1| hypothetical protein
            ARALYDRAFT_470090 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  402 bits (1033), Expect = e-109
 Identities = 212/338 (62%), Positives = 251/338 (74%), Gaps = 3/338 (0%)
 Frame = -1

Query: 1327 VSSSIFNARNYISSPYAQ-YNTCTRTNKGLIVRAANRAKAEAK-PRGNEDDYYATLKALN 1154
            ++S+I N  +   S +    N  ++   G I  A +R + +    + + DDY++TLK+LN
Sbjct: 5    ITSTIINCNSLSPSSWISGENWPSKVLLGEISAAFSRRRTKVSCGKSSPDDYHSTLKSLN 64

Query: 1153 SKGRTPRKSLGQHYMLNSSINEQLVGAADVKEGDVVLEIGPGTGSLTNVLVDSGATVLAI 974
            S+GR PRKSLGQHYMLNS IN+QL  AADVKEGD VLEIGPGTGSLTNVL++ GATVLAI
Sbjct: 65   SRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAI 124

Query: 973  EKDPYMAELVRERFASAENVKVLQEDFTRCHVRSHLLPYLEGKLLDRSPQR-AKVVSNLP 797
            EKDP+M +LV ERFA ++  KVLQEDF +CH+RSH+L  LE + L       AKVVSNLP
Sbjct: 125  EKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILESRRLSHPDSSLAKVVSNLP 184

Query: 796  FNISTDVVKFLLPMGDIFSXXXXXXXXXXXXXXVDPSLRTSEYRPINIFINFYSDPEYKL 617
            FNISTDVVK LLPMGDIFS              V+P+LRTSEYRPINI INFYS+PEY  
Sbjct: 185  FNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNF 244

Query: 616  NVPRTNFFPQPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHIR 437
             VPR NFFPQPKVDAA+V F+LK   DYP VSSTK+FFS+VNSAFNGKRKMLRKSLQHI 
Sbjct: 245  RVPRENFFPQPKVDAAVVTFKLKHPSDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHIS 304

Query: 436  SSSEIEEALTNMNLPATSRPEELTIEDFVSLHSAIVKD 323
            SS EIE+AL    LP TSRPEELT++DFV LH+ I  +
Sbjct: 305  SSPEIEKALGVAGLPVTSRPEELTLDDFVKLHNVIASE 342


>ref|XP_004133887.1| PREDICTED: ribosomal RNA small subunit methyltransferase A-like
            [Cucumis sativus]
          Length = 347

 Score =  400 bits (1029), Expect = e-109
 Identities = 204/290 (70%), Positives = 239/290 (82%), Gaps = 1/290 (0%)
 Frame = -1

Query: 1192 NEDDYYATLKALNSKGRTPRKSLGQHYMLNSSINEQLVGAADVKEGDVVLEIGPGTGSLT 1013
            N DDY++T++ALNSKGR PRKSLGQHYMLNSSINEQL  AA+VKEGDVVLEIGPGTGSLT
Sbjct: 57   NPDDYHSTIRALNSKGRVPRKSLGQHYMLNSSINEQLAAAANVKEGDVVLEIGPGTGSLT 116

Query: 1012 NVLVDSGATVLAIEKDPYMAELVRERFASAENVKVLQEDFTRCHVRSHLLPYLEG-KLLD 836
            NVL++SGATVLA+EKD YMA LV ERFA+   +KVL EDF +C+V SH++  L+  +L +
Sbjct: 117  NVLINSGATVLAVEKDSYMAGLVDERFANTNRLKVLNEDFVKCNVSSHMMSLLKSIELSE 176

Query: 835  RSPQRAKVVSNLPFNISTDVVKFLLPMGDIFSXXXXXXXXXXXXXXVDPSLRTSEYRPIN 656
               Q AKVVSN+PFNISTD++K LLPMGDIFS              V+ SLRTSEYRPIN
Sbjct: 177  ARSQPAKVVSNIPFNISTDIIKQLLPMGDIFSEVVLLLQEEAALRLVETSLRTSEYRPIN 236

Query: 655  IFINFYSDPEYKLNVPRTNFFPQPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNG 476
            +F+NFYSDPE K  VPRTNFFPQP VDAA+V+F+LK+A DYPAVSSTKSFFSMVNSAFNG
Sbjct: 237  VFVNFYSDPELKFKVPRTNFFPQPNVDAAVVSFKLKRAADYPAVSSTKSFFSMVNSAFNG 296

Query: 475  KRKMLRKSLQHIRSSSEIEEALTNMNLPATSRPEELTIEDFVSLHSAIVK 326
            KRKMLRKSLQHI +S EIE+AL + +L  TSRPEEL+++DFV LH+ IVK
Sbjct: 297  KRKMLRKSLQHICTSLEIEKALEDSSLLPTSRPEELSLDDFVKLHNLIVK 346


>ref|NP_171690.1| Ribosomal RNA adenine dimethylase family protein [Arabidopsis
            thaliana] gi|3005590|gb|AAC09322.1| dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|26449914|dbj|BAC42078.1| putative dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|28827572|gb|AAO50630.1| putative dimethyladenosine
            transferase [Arabidopsis thaliana]
            gi|332189223|gb|AEE27344.1| Ribosomal RNA adenine
            dimethylase family protein [Arabidopsis thaliana]
          Length = 343

 Score =  400 bits (1029), Expect = e-109
 Identities = 212/338 (62%), Positives = 250/338 (73%), Gaps = 3/338 (0%)
 Frame = -1

Query: 1327 VSSSIFNARNYISSPYAQYNTCTRTNKGLIVRAANRAKAEAKPRGNE--DDYYATLKALN 1154
            ++S+  N  +   S     N+ ++   G I  A +R +      G    DDY++TLK+LN
Sbjct: 6    ITSATINCNSLSPSWTCGDNSPSKLLLGEISAALSRRRTVKVSCGKSSPDDYHSTLKSLN 65

Query: 1153 SKGRTPRKSLGQHYMLNSSINEQLVGAADVKEGDVVLEIGPGTGSLTNVLVDSGATVLAI 974
            S+GR PRKSLGQHYMLNS IN+QL  AADVKEGD VLEIGPGTGSLTNVL++ GATVLAI
Sbjct: 66   SRGRFPRKSLGQHYMLNSDINDQLASAADVKEGDFVLEIGPGTGSLTNVLINLGATVLAI 125

Query: 973  EKDPYMAELVRERFASAENVKVLQEDFTRCHVRSHLLPYLEGKLLDRSPQR-AKVVSNLP 797
            EKDP+M +LV ERFA ++  KVLQEDF +CH+RSH+L  LE + L       AKVVSNLP
Sbjct: 126  EKDPHMVDLVSERFAGSDKFKVLQEDFVKCHIRSHMLSILETRRLSHPDSALAKVVSNLP 185

Query: 796  FNISTDVVKFLLPMGDIFSXXXXXXXXXXXXXXVDPSLRTSEYRPINIFINFYSDPEYKL 617
            FNISTDVVK LLPMGDIFS              V+P+LRTSEYRPINI INFYS+PEY  
Sbjct: 186  FNISTDVVKLLLPMGDIFSKVVLLLQDEAALRLVEPALRTSEYRPINILINFYSEPEYNF 245

Query: 616  NVPRTNFFPQPKVDAAIVAFRLKQAVDYPAVSSTKSFFSMVNSAFNGKRKMLRKSLQHIR 437
             VPR NFFPQPKVDAA+V F+LK   DYP VSSTK+FFS+VNSAFNGKRKMLRKSLQHI 
Sbjct: 246  RVPRENFFPQPKVDAAVVTFKLKHPRDYPDVSSTKNFFSLVNSAFNGKRKMLRKSLQHIS 305

Query: 436  SSSEIEEALTNMNLPATSRPEELTIEDFVSLHSAIVKD 323
            SS +IE+AL    LPATSRPEELT++DFV LH+ I ++
Sbjct: 306  SSPDIEKALGVAGLPATSRPEELTLDDFVKLHNVIARE 343