BLASTX nr result

ID: Bupleurum21_contig00024910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024910
         (335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311577.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002272777.2| PREDICTED: uncharacterized protein LOC100261...   124   6e-27
emb|CBI27473.3| unnamed protein product [Vitis vinifera]              124   6e-27
ref|XP_002518814.1| conserved hypothetical protein [Ricinus comm...   123   1e-26
ref|XP_002888126.1| hypothetical protein ARALYDRAFT_893474 [Arab...   102   4e-20

>ref|XP_002311577.1| predicted protein [Populus trichocarpa] gi|222851397|gb|EEE88944.1|
           predicted protein [Populus trichocarpa]
          Length = 256

 Score =  129 bits (323), Expect = 3e-28
 Identities = 60/89 (67%), Positives = 73/89 (82%)
 Frame = -1

Query: 335 EQNNEVLRHISSNLSTFKLQENIDLFCCTRNNISTILNHMSNMRGVMSRMPPLPLSINEE 156
           +QN +    IS+NLSTFKLQ+NID FC TRNNI+ ILN M  M G+MSRMPPLP+SI+E+
Sbjct: 168 DQNAQAFSQISANLSTFKLQDNIDFFCYTRNNITAILNDMREMPGIMSRMPPLPVSIDED 227

Query: 155 LANSLMPITFQRMMYGLPNGIQLKQEPRC 69
           LANS++P T Q MM+G P+GIQLKQEPRC
Sbjct: 228 LANSILPNTIQSMMFGSPSGIQLKQEPRC 256


>ref|XP_002272777.2| PREDICTED: uncharacterized protein LOC100261483 [Vitis vinifera]
          Length = 300

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/89 (66%), Positives = 73/89 (82%)
 Frame = -1

Query: 335 EQNNEVLRHISSNLSTFKLQENIDLFCCTRNNISTILNHMSNMRGVMSRMPPLPLSINEE 156
           EQN +V   I++NLSTFKLQ+NIDLFC TR+NI+ ILN M +M G+MS MPPL + INE+
Sbjct: 212 EQNAQVFNQITANLSTFKLQDNIDLFCRTRDNITAILNDMRDMPGIMSHMPPLNVYINED 271

Query: 155 LANSLMPITFQRMMYGLPNGIQLKQEPRC 69
           LANS++P T Q MMYGLP+GI +KQEPRC
Sbjct: 272 LANSILPNTSQTMMYGLPSGIHVKQEPRC 300


>emb|CBI27473.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  124 bits (312), Expect = 6e-27
 Identities = 59/89 (66%), Positives = 73/89 (82%)
 Frame = -1

Query: 335 EQNNEVLRHISSNLSTFKLQENIDLFCCTRNNISTILNHMSNMRGVMSRMPPLPLSINEE 156
           EQN +V   I++NLSTFKLQ+NIDLFC TR+NI+ ILN M +M G+MS MPPL + INE+
Sbjct: 175 EQNAQVFNQITANLSTFKLQDNIDLFCRTRDNITAILNDMRDMPGIMSHMPPLNVYINED 234

Query: 155 LANSLMPITFQRMMYGLPNGIQLKQEPRC 69
           LANS++P T Q MMYGLP+GI +KQEPRC
Sbjct: 235 LANSILPNTSQTMMYGLPSGIHVKQEPRC 263


>ref|XP_002518814.1| conserved hypothetical protein [Ricinus communis]
           gi|223542195|gb|EEF43739.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 304

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = -1

Query: 335 EQNNEVLRHISSNLSTFKLQENIDLFCCTRNNISTILNHMSNMRGVMSRMPPLPLSINEE 156
           EQN +    I++NLSTFKLQ+NIDLFC TR NI+ ILN M  M G+MS+MPPLP+SINE+
Sbjct: 216 EQNVQAFSKITANLSTFKLQDNIDLFCRTRTNITAILNDMRGMPGIMSQMPPLPVSINED 275

Query: 155 LANSLMPITFQRMMYGLPNGIQLKQEPRC 69
           LANS++P T Q MM+  P+GIQLKQEPRC
Sbjct: 276 LANSILPSTTQSMMFCSPSGIQLKQEPRC 304


>ref|XP_002888126.1| hypothetical protein ARALYDRAFT_893474 [Arabidopsis lyrata subsp.
           lyrata] gi|297333967|gb|EFH64385.1| hypothetical protein
           ARALYDRAFT_893474 [Arabidopsis lyrata subsp. lyrata]
          Length = 254

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/87 (59%), Positives = 61/87 (70%)
 Frame = -1

Query: 332 QNNEVLRHISSNLSTFKLQENIDLFCCTRNNISTILNHMSNMRGVMSRMPPLPLSINEEL 153
           QN +    ISSNLS  KLQ+N+ LF   RNNIS ILN M  M G++SRMPPLP+SIN EL
Sbjct: 167 QNAQAFSQISSNLSVCKLQDNVSLFYMARNNISAILNDMKEMPGIISRMPPLPVSINNEL 226

Query: 152 ANSLMPITFQRMMYGLPNGIQLKQEPR 72
           A+SLM  T Q   Y +P+ I LKQEPR
Sbjct: 227 ASSLMTSTTQPRSYTIPSSIYLKQEPR 253


Top