BLASTX nr result

ID: Bupleurum21_contig00024899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024899
         (1290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]   247   4e-63
ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|2...   226   8e-57
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   212   1e-52
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   208   3e-51
ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [S...   203   7e-50

>emb|CAN77450.1| hypothetical protein VITISV_016971 [Vitis vinifera]
          Length = 652

 Score =  247 bits (631), Expect = 4e-63
 Identities = 134/343 (39%), Positives = 184/343 (53%)
 Frame = -3

Query: 1249 LSWNCRGLGNXXXXXXXXXXXXXXRPDFIFLSETISLGSRIEMLRVKFGYAQCFAVDCVG 1070
            +SWNCRGLGN              +PDFIFL ET+   +++E L+ K G+   F VD VG
Sbjct: 310  ISWNCRGLGNPRTVLALCEINKSRKPDFIFLIETLVHSAQVEKLKSKLGFEGAFCVDRVG 369

Query: 1069 RSGGLAVMWKAHVSCQVSGYSQNHIDIQFNENNLVAWRMTCFYGFPERSRRRNSWDLIRR 890
            R GGLA +W+      +  YSQ+HID++ +E + + WR+T FYGFP+RS+R  SW+L+R 
Sbjct: 370  RGGGLAFLWRKAGMFSLLXYSQSHIDMEVSEEDGLQWRVTGFYGFPDRSQRHLSWNLLRS 429

Query: 889  LAAVSQEPWVIFGDFNDLLYDSDKWGANKHPQHLMNGFRAALEDSMLSEIELCGGKFTWE 710
            L + S  PW   GDFND++ + +K G+  HP  L+ GF AAL D  L ++ L G  FTWE
Sbjct: 430  LYSASSLPWCCLGDFNDIVCNEEKRGSVPHPPWLIRGFCAALSDCQLQDLXLKGYPFTWE 489

Query: 709  KSRGSKDWVKERLDRAFASGSWWHKFPLCKLTVHHTSCSDHDPIVLDLLNISISKKVFRF 530
            + RGS  WV+E LDRA  + SW + F   KL       SDH PI L+ ++         F
Sbjct: 490  RGRGSSHWVEEXLDRALVNVSWLNLFXBAKLNNLVAPVSDHSPIELNTVDKFSCVYKHXF 549

Query: 529  KFENTWLKEPNFRKEVIDYWSGIPPVHLLPKLISISSFMAKWGRRFFHKFREKIKLQKDI 350
            +FEN WLKE      V + W       L+ K+ + S  + +WGR    KF+ KI   K  
Sbjct: 550  RFENGWLKEDGLDFVVSNAWRSPHAESLIDKIHTCSFALKEWGREHAFKFKNKISHYKRC 609

Query: 349  IARYVNCVDDRGVRQYIAXXXXXXXXXXXXXEYWKQRAKIFWL 221
            I +Y +       +   A              +WKQRAK  WL
Sbjct: 610  IEQYRDKDGPTDSQVLKAYKTVLSNVLMQEEFFWKQRAKSHWL 652


>ref|XP_002300602.1| predicted protein [Populus trichocarpa] gi|222842328|gb|EEE79875.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  226 bits (577), Expect = 8e-57
 Identities = 121/342 (35%), Positives = 185/342 (54%)
 Frame = -3

Query: 1090 FAVDCVGRSGGLAVMWKAHVSCQVSGYSQNHIDIQFNENNLVAWRMTCFYGFPERSRRRN 911
            FAVD +GR GGLAV+W++  S  + GYS NHID+   E N   WR T +YG P+R+R+  
Sbjct: 42   FAVDRLGRGGGLAVLWRSSASVSLLGYSNNHIDLLVVEANNFIWRFTGYYGLPDRNRKME 101

Query: 910  SWDLIRRLAAVSQEPWVIFGDFNDLLYDSDKWGANKHPQHLMNGFRAALEDSMLSEIELC 731
            SW+L+R L+  S  PWV  GD+ND+L   +K G   HP     GFR A+ED  L+++ L 
Sbjct: 102  SWNLLRALSRQSALPWVCMGDYNDMLCAEEKRGRVLHPNSSFQGFREAVEDCKLTDMPLI 161

Query: 730  GGKFTWEKSRGSKDWVKERLDRAFASGSWWHKFPLCKLTVHHTSCSDHDPIVLDLLNISI 551
            G  FTWE+ RG+ +W++ER+DRA  S SW+  F   +L +   S SDH P++L    +S 
Sbjct: 162  GYPFTWERGRGTAEWIQERIDRAMCSDSWFDYFDRAELHILTCSSSDHSPLLLRTRVVS- 220

Query: 550  SKKVFRFKFENTWLKEPNFRKEVIDYWSGIPPVHLLPKLISISSFMAKWGRRFFHKFREK 371
                                 +++ ++ G   + LL +    +  +++WGR     F+ +
Sbjct: 221  ------------------SHDQLMGWFRG---MGLLDEFCICTGRVSQWGRSLGRNFKVE 259

Query: 370  IKLQKDIIARYVNCVDDRGVRQYIAXXXXXXXXXXXXXEYWKQRAKIFWLQEGDANTKFF 191
            I+   + +    +  D+    ++               ++W+QRAKI+WL EG  NTK+F
Sbjct: 260  IRDCHNKLDVLRHLDDEHSAIEFKNCTDRLARLLAQEEDFWRQRAKIYWLTEGGLNTKYF 319

Query: 190  HATASARKKNNHIPYLYTAAGEKVESHEDMCKVVKNYFVEVF 65
            H+ A+AR++ N I  L   AG  VE  E +  V K+YF  +F
Sbjct: 320  HSVATARRRRNVISALVDGAGTVVEDTEGLQGVAKDYFTNLF 361


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  212 bits (540), Expect = 1e-52
 Identities = 124/405 (30%), Positives = 190/405 (46%), Gaps = 4/405 (0%)
 Frame = -3

Query: 1258 MNCLSWNCRGLGNXXXXXXXXXXXXXXRPDFIFLSETISLGSRIEMLRVKFGYAQCFAVD 1079
            M  L WNC+G+GN               PD +F+SET    + +E  +   G++  F V 
Sbjct: 1    MKILCWNCQGMGNPWTVRQLRRLMASNTPDSLFMSETKVTKNIVEQKKESLGFSGAFGVS 60

Query: 1078 CVGRSGGLAVMWKAH-VSCQVSGYSQNHIDIQFNENNLVAWRMTCFYGFPERSRRRNSWD 902
            CVGR+GGL + WK   +S ++  +SQNHI      N  V WR    YG+PE   +  +W 
Sbjct: 61   CVGRAGGLCMFWKEETISFRMVSFSQNHICGDVGSNGDVRWRFVGIYGWPEEENKHKTWA 120

Query: 901  LIRRLAAVSQEPWVIFGDFNDLLYDSDKWGANKHPQHLMNGFRAALEDSMLSEIELCGGK 722
            LI+ L    + P V  GDFN++L   +K G     +  + GFR  ++D  L ++   G  
Sbjct: 121  LIKGLCDEYEGPIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQW 180

Query: 721  FTWEKSRGSKDWVKERLDRAFASGSWWHKFPLCKLTVHHTSCSDHDPIVLDLLNIS--IS 548
             TWE+ R  +  ++ERLDR   S SW H FP   +      CSDH  IVL  L       
Sbjct: 181  HTWERGRSPESRIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPR 240

Query: 547  KKVFRFKFENTWLKEPNFRKEVIDYWSGIPPVHLLPKLISISSFMAKWGRRFFHKFREKI 368
            ++   F FE  WL +    + V   W+      +  KL +++  +  W ++ F   R+KI
Sbjct: 241  RRAGGFWFETFWLLDDTCEEVVRGAWNAAEGGRICEKLGAVARELQGWSKKTFGSLRKKI 300

Query: 367  K-LQKDIIARYVNCVDDRGVRQYIAXXXXXXXXXXXXXEYWKQRAKIFWLQEGDANTKFF 191
            + ++K + A            + +               YW  R+++  +++GD NT +F
Sbjct: 301  EAVEKKLHAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYF 360

Query: 190  HATASARKKNNHIPYLYTAAGEKVESHEDMCKVVKNYFVEVFAGS 56
            H  AS RKK N I  ++   G      E++  VV+ YF E+F  S
Sbjct: 361  HHKASQRKKRNLIHGIFDGGGRWQTEGEEIECVVERYFQEIFTSS 405


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  208 bits (529), Expect = 3e-51
 Identities = 131/416 (31%), Positives = 197/416 (47%), Gaps = 13/416 (3%)
 Frame = -3

Query: 1249 LSWNCRGLGNXXXXXXXXXXXXXXRPDFIFLSETISLGSRIEMLRVKFGYAQCFAVDCVG 1070
            LSWNCRG+G+               P  +FLSET      +E ++ K  +    AVDC G
Sbjct: 5    LSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCEG 64

Query: 1069 ----RSGGLAVMWKAHVSCQVSGYSQNHIDIQFNENNLVAWRMTCFYGFPERSRRRNSWD 902
                R GGLA++W++ +  QV   S NHIDI   E     WR T  YG+PE   +  +  
Sbjct: 65   ECRKRRGGLAMLWRSEIKVQVMSMSSNHIDIVVGEEAQGEWRFTGIYGYPEEEHKDKTGA 124

Query: 901  LIRRLAAVSQEPWVIFGDFNDLLYDSDKWGANKHPQHLMNGFRAALEDSMLSEIELCGGK 722
            L+  LA  S+ PW+  GDFN +L  S+K G +       + FR A+E+    ++   G +
Sbjct: 125  LLSALARASRRPWLCGGDFNLMLVASEKKGGDGFNSREADIFRNAMEECHFMDLGFVGYE 184

Query: 721  FTWEKSRGSKDWVKERLDRAFASGSWWHKFPLCKLTVHHTSCSDHDPIVLDLLN----IS 554
            FTW  +RG    ++ERLDR  A+  W  KFP   ++      SDH PIV  +       +
Sbjct: 185  FTWTNNRGGDANIQERLDRFVANDLWKIKFPGSFVSHLPKRKSDHVPIVASVKGAQSAAT 244

Query: 553  ISKKVFRFKFENTWLKEPNFRKEVIDYW-----SGIPPVHLLPKLISISSFMAKWGRRFF 389
             +KK  RF+FE  WL+E    + V + W     +GI       KL+S S       ++F 
Sbjct: 245  RTKKSKRFRFEAMWLREGESDEVVKETWMRGTDAGINLARTANKLLSWSK------QKFG 298

Query: 388  HKFREKIKLQKDIIARYVNCVDDRGVRQYIAXXXXXXXXXXXXXEYWKQRAKIFWLQEGD 209
            H  +E    Q  +     +   +  +    A              YW QR++  W++ GD
Sbjct: 299  HVAKEIRMCQHQMKVLMESEPSEDNIMHMRALDARMDELEKREEVYWHQRSRQDWIKSGD 358

Query: 208  ANTKFFHATASARKKNNHIPYLYTAAGEKVESHEDMCKVVKNYFVEVFAGSNDIDV 41
             NTKFFH  AS R++ N++  +   AGE  E  +D+ +   +YF  +F   N+ ++
Sbjct: 359  KNTKFFHQKASHREQRNNVRRIRNEAGEWFEDEDDVTECFAHYFENLFQSGNNCEM 414


>ref|XP_002450418.1| hypothetical protein SORBIDRAFT_05g005061 [Sorghum bicolor]
            gi|241936261|gb|EES09406.1| hypothetical protein
            SORBIDRAFT_05g005061 [Sorghum bicolor]
          Length = 753

 Score =  203 bits (517), Expect = 7e-50
 Identities = 131/436 (30%), Positives = 209/436 (47%), Gaps = 18/436 (4%)
 Frame = -3

Query: 1258 MNCLSWNCRGLGNXXXXXXXXXXXXXXRPDFIFLSETISLGSRIEMLRVKFGYAQCFAVD 1079
            M  L WNCRG+GN               P  +F+ ET     R+E LR    +   FAV+
Sbjct: 1    MKTLCWNCRGIGNPATVKELRDLAKDYAPSVMFIMETQISKYRVENLRYTLSFDNSFAVN 60

Query: 1078 CVGRSGGLAVMWKAHVSCQVSGYSQNHIDIQFNENNLVAWRMTCFYGFPERSRRRNSWDL 899
              GRSGGL + W   V   +  YS  HID   +E+     RM+  YG P RS R  +WD+
Sbjct: 61   SSGRSGGLGLFWNNDVLLSIQKYSNYHIDTIISEHGKEPRRMSFIYGEPNRSFRYRTWDI 120

Query: 898  IRRLAAVSQEPWVIFGDFNDLLYDSDKWGANKHPQHLMNGFRAALEDSMLSEIELCGGKF 719
            ++++ + +  PWV  GDFN++L   ++ G N+  ++LM G R A++   L +I   G  +
Sbjct: 121  MKQMRSDTDLPWVCMGDFNEILRREEQLGPNEREEYLMEGVRDAVDMCQLRDIGYIGLDW 180

Query: 718  TWEKSRGSKDWVKERLDRAFASGSWWHKFPLCKLTVHHTSCSDHDPIVL----DLLNISI 551
            T+EK      +V+ RLDRA AS +W  +FPL  +       SDH PI+L    D  N   
Sbjct: 181  TFEKKVAGGHFVRVRLDRALASVNWCARFPLAAVQHLTAVKSDHCPILLSHVPDERNEGG 240

Query: 550  SKKVFRFKFENTWLKEPNFRKEVIDYWSGIPPVH----LLPKLISISSFMAKWGRRFFHK 383
              +   F++E  W         +   W      +    +  KL  +   +  WG + F  
Sbjct: 241  GCQGKPFRYELMWETNERLSSLIEQIWKNGQHCNSVKDMKDKLFHLGEELKSWGGKTFGV 300

Query: 382  FREKIKLQK--------DIIARYVNCVDDRGVRQYIAXXXXXXXXXXXXXEYWKQRAKIF 227
             R+++++QK        D     V+  + + V + I                W+QR++I 
Sbjct: 301  VRKELRVQKKRLEQLRADPSRNTVSEEEQKIVNRIILLNYQEEIM-------WRQRSRIT 353

Query: 226  WLQEGDANTKFFHATASARKKNNHIPYLYTAAGEKVESHEDMCKVVKNYFVEVF--AGSN 53
            WL EGD+NTKFFH  AS R+  N I  L    G +  + +++ ++V +++  +F   G++
Sbjct: 354  WLHEGDSNTKFFHQRASRRRIRNRIDKLNRPDGSECTNVDELHQMVVDFYRNLFESEGTS 413

Query: 52   DIDVHQDTAANRVTDD 5
            ++++  D    +VTDD
Sbjct: 414  NMNLVLDHIPRKVTDD 429


Top