BLASTX nr result

ID: Bupleurum21_contig00024895 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024895
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P53535.1|PHSL2_SOLTU RecName: Full=Alpha-1,4 glucan phosphory...   173   3e-41
ref|XP_002512108.1| glycogen phosphorylase, putative [Ricinus co...   172   7e-41
ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus co...   165   6e-39
emb|CBI27267.3| unnamed protein product [Vitis vinifera]              163   2e-38
ref|XP_002316098.1| predicted protein [Populus trichocarpa] gi|2...   162   4e-38

>sp|P53535.1|PHSL2_SOLTU RecName: Full=Alpha-1,4 glucan phosphorylase L-2 isozyme,
           chloroplastic/amyloplastic; AltName: Full=Starch
           phosphorylase L-2; Flags: Precursor
           gi|313349|emb|CAA52036.1| starch phosphorylase [Solanum
           tuberosum]
          Length = 974

 Score =  173 bits (438), Expect = 3e-41
 Identities = 84/120 (70%), Positives = 102/120 (85%)
 Frame = -3

Query: 362 RSFAINNVLTNPHQRLQQTSEEDGIGDALDKFVPDSASVSSSIKYHAEMTPSFAPEKFEL 183
           RSF++++V ++  Q+ + +S ++G    LD F PDS SV SSIKYHAE TPSF+PEKFEL
Sbjct: 46  RSFSVSSVASDQKQKTKDSSSDEGF--TLDVFQPDSTSVLSSIKYHAEFTPSFSPEKFEL 103

Query: 182 PKAFYATAESVRDMLIVNWNATYKYYEKMNVKQAYYLSMEFLQGRALLNSIGNLELSGAY 3
           PKA+YATAESVRD LI+NWNATY++YEKMNVKQAYYLSMEFLQGRALLN+IGNL L+G Y
Sbjct: 104 PKAYYATAESVRDTLIINWNATYEFYEKMNVKQAYYLSMEFLQGRALLNAIGNLGLTGPY 163


>ref|XP_002512108.1| glycogen phosphorylase, putative [Ricinus communis]
           gi|223549288|gb|EEF50777.1| glycogen phosphorylase,
           putative [Ricinus communis]
          Length = 973

 Score =  172 bits (435), Expect = 7e-41
 Identities = 86/127 (67%), Positives = 102/127 (80%)
 Frame = -3

Query: 383 RSSNYTSRSFAINNVLTNPHQRLQQTSEEDGIGDALDKFVPDSASVSSSIKYHAEMTPSF 204
           R S   +R+ ++ N+ ++  QR Q   E    GD+L  F+PDSAS++SSIKYHAE TPSF
Sbjct: 39  RFSRSRTRTLSVKNIASD--QRQQDLQEHITQGDSLASFIPDSASIASSIKYHAEFTPSF 96

Query: 203 APEKFELPKAFYATAESVRDMLIVNWNATYKYYEKMNVKQAYYLSMEFLQGRALLNSIGN 24
           +PE FELPKAF ATAESVRD LI+NWNATY YY K++VKQAYYLSMEFLQGRALLN+IGN
Sbjct: 97  SPEHFELPKAFVATAESVRDSLIINWNATYDYYAKIHVKQAYYLSMEFLQGRALLNAIGN 156

Query: 23  LELSGAY 3
           LELSGAY
Sbjct: 157 LELSGAY 163


>ref|XP_002526085.1| glycogen phosphorylase, putative [Ricinus communis]
           gi|223534582|gb|EEF36279.1| glycogen phosphorylase,
           putative [Ricinus communis]
          Length = 977

 Score =  165 bits (418), Expect = 6e-39
 Identities = 78/125 (62%), Positives = 99/125 (79%)
 Frame = -3

Query: 377 SNYTSRSFAINNVLTNPHQRLQQTSEEDGIGDALDKFVPDSASVSSSIKYHAEMTPSFAP 198
           S   S SF++ NV T P  ++  +   +        F  DS+S++SSIKYHAE TPSF+P
Sbjct: 46  SRPVSTSFSVRNVSTEPKTKIVDSLSHEAAPSNRSLFNLDSSSIASSIKYHAEFTPSFSP 105

Query: 197 EKFELPKAFYATAESVRDMLIVNWNATYKYYEKMNVKQAYYLSMEFLQGRALLNSIGNLE 18
           E+FELPKAF+ATA+SVRD LI+NWN+TY+YYEK+NVKQAYY+SMEFLQGRALLN++GNLE
Sbjct: 106 EQFELPKAFFATAQSVRDSLIINWNSTYEYYEKLNVKQAYYMSMEFLQGRALLNAVGNLE 165

Query: 17  LSGAY 3
           L+GAY
Sbjct: 166 LTGAY 170


>emb|CBI27267.3| unnamed protein product [Vitis vinifera]
          Length = 933

 Score =  163 bits (413), Expect = 2e-38
 Identities = 84/131 (64%), Positives = 101/131 (77%), Gaps = 2/131 (1%)
 Frame = -3

Query: 389 ISRSSNYTSRSFA--INNVLTNPHQRLQQTSEEDGIGDALDKFVPDSASVSSSIKYHAEM 216
           I  SS + SR     I +V +N  Q L+    ++   D LD F PDSAS++SSIKYH+E 
Sbjct: 40  IRTSSTWHSRRSLSIIRSVASNQKQTLKDPPTQE---DGLDSFAPDSASIASSIKYHSEF 96

Query: 215 TPSFAPEKFELPKAFYATAESVRDMLIVNWNATYKYYEKMNVKQAYYLSMEFLQGRALLN 36
           TP F+P +FELPKA+ ATA+SV+DMLI+NWNATY YYEKMNVKQAYYLSME+LQGRALLN
Sbjct: 97  TPLFSPGRFELPKAYLATAQSVQDMLIINWNATYDYYEKMNVKQAYYLSMEYLQGRALLN 156

Query: 35  SIGNLELSGAY 3
           +IGNLELSG Y
Sbjct: 157 AIGNLELSGPY 167


>ref|XP_002316098.1| predicted protein [Populus trichocarpa] gi|222865138|gb|EEF02269.1|
           predicted protein [Populus trichocarpa]
          Length = 953

 Score =  162 bits (411), Expect = 4e-38
 Identities = 81/121 (66%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = -3

Query: 362 RSFAINNVLTNPHQRLQQTSEEDGIGDA-LDKFVPDSASVSSSIKYHAEMTPSFAPEKFE 186
           R+ ++ N+ ++  Q L+  S     G+A L+   PDSAS+++SI+YHAE TP F+PE F+
Sbjct: 41  RNLSVKNITSDQRQELKDPSVN---GEASLETLEPDSASIAASIQYHAEFTPLFSPEHFD 97

Query: 185 LPKAFYATAESVRDMLIVNWNATYKYYEKMNVKQAYYLSMEFLQGRALLNSIGNLELSGA 6
           LPKAF ATAESVRD LI+NWNATYKYYEKMNVKQAYYLSME+LQGRALLN+IGNLELSGA
Sbjct: 98  LPKAFVATAESVRDSLIINWNATYKYYEKMNVKQAYYLSMEYLQGRALLNAIGNLELSGA 157

Query: 5   Y 3
           Y
Sbjct: 158 Y 158


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