BLASTX nr result

ID: Bupleurum21_contig00024892 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024892
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   125   4e-27
ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glyci...   121   5e-26
ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini...   120   2e-25
emb|CBI34744.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini...   116   2e-24

>ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/88 (65%), Positives = 74/88 (84%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFL-DVGSQHLLKKDIFSRL 177
           YLDPP+IC+LARLNRAFR ASS+DFIW++KLP NY + V + L DV  + L K+DI++RL
Sbjct: 35  YLDPPDICKLARLNRAFRDASSADFIWESKLPLNYKFIVEKALKDVSVEQLGKRDIYARL 94

Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261
            +P SFD GTK+IW+DKRTGGVCL+IS+
Sbjct: 95  CRPNSFDNGTKEIWLDKRTGGVCLAISS 122


>ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glycine max]
          Length = 281

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%)
 Frame = +1

Query: 1   YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFL-DVGSQHLLKKDIFSRL 177
           YLDPP+IC+LARLNRAFR AS +DFIW++KLP NY + V + L D   + L K+DI++RL
Sbjct: 35  YLDPPDICKLARLNRAFRDASVADFIWESKLPSNYKFIVEKALKDASVEELGKRDIYARL 94

Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261
            +P SFD GTK+IW+DKRTGGVCL+IS+
Sbjct: 95  CRPNSFDNGTKEIWLDKRTGGVCLAISS 122


>ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera]
           gi|296089069|emb|CBI38772.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  120 bits (300), Expect = 2e-25
 Identities = 56/88 (63%), Positives = 71/88 (80%), Gaps = 2/88 (2%)
 Frame = +1

Query: 4   LDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVR--RFLDVGSQHLLKKDIFSRL 177
           LDPPEIC+LARLNRAFRGAS++DFIW+AKLP NY   ++  +  D  S +L KK I++RL
Sbjct: 39  LDPPEICKLARLNRAFRGASAADFIWEAKLPPNYRSLIQELKIFDEFSMNLRKKGIYARL 98

Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261
            +P  FDGGTK++W+DKRTGGVC SIS+
Sbjct: 99  CRPNPFDGGTKEVWLDKRTGGVCFSISS 126


>emb|CBI34744.3| unnamed protein product [Vitis vinifera]
          Length = 309

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFLDVGSQHLLKKDIFSRLS 180
           YLDPPEIC+LA+LNRAFRGAS +D +W+ KLP NY   + +      ++L KK+I++RL 
Sbjct: 35  YLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLC 94

Query: 181 KPISFDGGTKQIWVDKRTGGVCLSISA 261
           +P  FDGGTK+ W+DKRTGGVCLSIS+
Sbjct: 95  QPNPFDGGTKKAWLDKRTGGVCLSISS 121


>ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera]
          Length = 283

 Score =  116 bits (291), Expect = 2e-24
 Identities = 52/87 (59%), Positives = 68/87 (78%)
 Frame = +1

Query: 1   YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFLDVGSQHLLKKDIFSRLS 180
           YLDPPEIC+LA+LNRAFRGAS +D +W+ KLP NY   + +      ++L KK+I++RL 
Sbjct: 35  YLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLC 94

Query: 181 KPISFDGGTKQIWVDKRTGGVCLSISA 261
           +P  FDGGTK+ W+DKRTGGVCLSIS+
Sbjct: 95  QPNPFDGGTKKAWLDKRTGGVCLSISS 121


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