BLASTX nr result
ID: Bupleurum21_contig00024892
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024892 (262 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glyci... 125 4e-27 ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glyci... 121 5e-26 ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vini... 120 2e-25 emb|CBI34744.3| unnamed protein product [Vitis vinifera] 116 2e-24 ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vini... 116 2e-24 >ref|XP_003521314.1| PREDICTED: F-box protein PP2-A13-like [Glycine max] Length = 281 Score = 125 bits (314), Expect = 4e-27 Identities = 58/88 (65%), Positives = 74/88 (84%), Gaps = 1/88 (1%) Frame = +1 Query: 1 YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFL-DVGSQHLLKKDIFSRL 177 YLDPP+IC+LARLNRAFR ASS+DFIW++KLP NY + V + L DV + L K+DI++RL Sbjct: 35 YLDPPDICKLARLNRAFRDASSADFIWESKLPLNYKFIVEKALKDVSVEQLGKRDIYARL 94 Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261 +P SFD GTK+IW+DKRTGGVCL+IS+ Sbjct: 95 CRPNSFDNGTKEIWLDKRTGGVCLAISS 122 >ref|XP_003528884.1| PREDICTED: F-box protein PP2-A13-like [Glycine max] Length = 281 Score = 121 bits (304), Expect = 5e-26 Identities = 56/88 (63%), Positives = 72/88 (81%), Gaps = 1/88 (1%) Frame = +1 Query: 1 YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFL-DVGSQHLLKKDIFSRL 177 YLDPP+IC+LARLNRAFR AS +DFIW++KLP NY + V + L D + L K+DI++RL Sbjct: 35 YLDPPDICKLARLNRAFRDASVADFIWESKLPSNYKFIVEKALKDASVEELGKRDIYARL 94 Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261 +P SFD GTK+IW+DKRTGGVCL+IS+ Sbjct: 95 CRPNSFDNGTKEIWLDKRTGGVCLAISS 122 >ref|XP_002269833.1| PREDICTED: F-box protein PP2-A13 [Vitis vinifera] gi|296089069|emb|CBI38772.3| unnamed protein product [Vitis vinifera] Length = 289 Score = 120 bits (300), Expect = 2e-25 Identities = 56/88 (63%), Positives = 71/88 (80%), Gaps = 2/88 (2%) Frame = +1 Query: 4 LDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVR--RFLDVGSQHLLKKDIFSRL 177 LDPPEIC+LARLNRAFRGAS++DFIW+AKLP NY ++ + D S +L KK I++RL Sbjct: 39 LDPPEICKLARLNRAFRGASAADFIWEAKLPPNYRSLIQELKIFDEFSMNLRKKGIYARL 98 Query: 178 SKPISFDGGTKQIWVDKRTGGVCLSISA 261 +P FDGGTK++W+DKRTGGVC SIS+ Sbjct: 99 CRPNPFDGGTKEVWLDKRTGGVCFSISS 126 >emb|CBI34744.3| unnamed protein product [Vitis vinifera] Length = 309 Score = 116 bits (291), Expect = 2e-24 Identities = 52/87 (59%), Positives = 68/87 (78%) Frame = +1 Query: 1 YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFLDVGSQHLLKKDIFSRLS 180 YLDPPEIC+LA+LNRAFRGAS +D +W+ KLP NY + + ++L KK+I++RL Sbjct: 35 YLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLC 94 Query: 181 KPISFDGGTKQIWVDKRTGGVCLSISA 261 +P FDGGTK+ W+DKRTGGVCLSIS+ Sbjct: 95 QPNPFDGGTKKAWLDKRTGGVCLSISS 121 >ref|XP_002282844.1| PREDICTED: F-box protein PP2-A12 [Vitis vinifera] Length = 283 Score = 116 bits (291), Expect = 2e-24 Identities = 52/87 (59%), Positives = 68/87 (78%) Frame = +1 Query: 1 YLDPPEICQLARLNRAFRGASSSDFIWDAKLPCNYNYFVRRFLDVGSQHLLKKDIFSRLS 180 YLDPPEIC+LA+LNRAFRGAS +D +W+ KLP NY + + ++L KK+I++RL Sbjct: 35 YLDPPEICKLAKLNRAFRGASRADLVWEPKLPSNYCLVIEKVFKDFPENLCKKEIYARLC 94 Query: 181 KPISFDGGTKQIWVDKRTGGVCLSISA 261 +P FDGGTK+ W+DKRTGGVCLSIS+ Sbjct: 95 QPNPFDGGTKKAWLDKRTGGVCLSISS 121