BLASTX nr result

ID: Bupleurum21_contig00024886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024886
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEO86797.1| cyclin [Camellia sinensis]                             413   e-113
ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223...   401   e-109
emb|CBI19854.3| unnamed protein product [Vitis vinifera]              389   e-106
ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]           385   e-105

>gb|AEO86797.1| cyclin [Camellia sinensis]
          Length = 439

 Score =  413 bits (1062), Expect = e-113
 Identities = 224/358 (62%), Positives = 262/358 (73%), Gaps = 15/358 (4%)
 Frame = -3

Query: 1040 RPSNCQGG---------SMAGRTRRALRIIEQNYAGAAPYPCAVSKRGILTEKVAISVKD 888
            RP+N QGG         +  G  RRAL  I +N  GA PYPCAV+KR  L+E   +S K+
Sbjct: 13   RPTNIQGGLHPGAGKLAAGMGHNRRALSTINRNIVGAHPYPCAVNKRPALSEDNGLSNKN 72

Query: 887  LQV--PVVVHRPMTRKLVAQMASKQKQTVVEETMQPVPLLPVINDK-DCPIIDLDEYKPK 717
                 P+  HRP+TRK  AQMA KQKQ + EET + V  LPV  +  DC IID+D+YK  
Sbjct: 73   HPPIPPIPAHRPITRKFAAQMAGKQKQPLPEETKKVVQSLPVPTESGDCSIIDVDDYKAA 132

Query: 716  DSFPEPMIVQHTXXXXXXXXXXXXXXXXXXXXD---IDSGDKNNALAVVEYINDLYAHYK 546
               P PM VQHT                        ID+ DK N LAVVEYI+D+YA+YK
Sbjct: 133  GDSPVPMFVQHTEAMLEEIDRMEVEMEDTTDDPVDDIDTSDKRNPLAVVEYIDDIYAYYK 192

Query: 545  NVENSSCVPSNYMTGQYDINERMRGILIDWLIEVHYKFELMQETLYLTVNLIDRFLALYP 366
             VE+SSCV  NY+  Q+DINERMRGILIDWLIEVHYKFELM ETLYLTVNLIDRFLA+ P
Sbjct: 193  KVESSSCVLPNYIGQQFDINERMRGILIDWLIEVHYKFELMDETLYLTVNLIDRFLAVQP 252

Query: 365  VMRKKLQLVGVTAMLLACKYEEVSVPVVEDLIVISDRAYTRNEVLEMETLMVNKLQFNLS 186
            V+RKKLQLVGVTAMLLACKYEEVSVPV+EDLI+ISD+AY+R E+L+ME LMVN LQFNLS
Sbjct: 253  VVRKKLQLVGVTAMLLACKYEEVSVPVMEDLILISDKAYSRKEMLQMEKLMVNTLQFNLS 312

Query: 185  VPTIYVFIKRFLKAAQSDHKLELLAFYMCELCLVEYEMLKFPPSMIAAAAVYTAQCTL 12
            VPT YVF++RFLKAAQSD KLELL+F++ EL LVEYEM+KFPPS++AAAAV+TAQC L
Sbjct: 313  VPTPYVFMRRFLKAAQSDKKLELLSFFIIELSLVEYEMVKFPPSLLAAAAVFTAQCAL 370


>ref|XP_002307791.1| predicted protein [Populus trichocarpa] gi|222857240|gb|EEE94787.1|
            predicted protein [Populus trichocarpa]
          Length = 436

 Score =  402 bits (1033), Expect = e-110
 Identities = 215/338 (63%), Positives = 255/338 (75%), Gaps = 6/338 (1%)
 Frame = -3

Query: 1007 GRTRRALRIIEQNYAGAAPYPCAVSKRGILTEKVAISVKDLQVPVVVHRPMTRKLVAQMA 828
            G  RRAL  I +N  G  PYPCAV+KRG L+E+ A   K+  +PV  HRP+TRK  AQ+A
Sbjct: 33   GTNRRALSNINRNIIGGPPYPCAVNKRG-LSEREAFCNKNPPIPV--HRPLTRKYAAQLA 89

Query: 827  SKQKQTVV-EETMQPVPLLPVIND-KDCPIIDLDEYKPKDSFPEPMIVQHTXXXXXXXXX 654
            +KQ+Q +  EE  +PV  +P+ ++ +DC IID++ YK  D F  P  VQHT         
Sbjct: 90   NKQQQQLEPEEIKKPVRPVPISSEPEDCNIIDVEGYKTSDDFSAPTFVQHTEAMLEEIDR 149

Query: 653  XXXXXXXXXXXD----IDSGDKNNALAVVEYINDLYAHYKNVENSSCVPSNYMTGQYDIN 486
                       +    ID  DK + LAVVEYI+DLY  YK  E S CVP NYM  Q+DIN
Sbjct: 150  MDEVEMEDVEEEPVLDIDGCDKRDPLAVVEYIDDLYNFYKKAERSGCVPPNYMAQQFDIN 209

Query: 485  ERMRGILIDWLIEVHYKFELMQETLYLTVNLIDRFLALYPVMRKKLQLVGVTAMLLACKY 306
            +RMRGILIDWLIEVHYKFELM+ETLYLTVNLIDRFLA++PV+RKKLQLVGVTAMLLACKY
Sbjct: 210  DRMRGILIDWLIEVHYKFELMEETLYLTVNLIDRFLAVHPVVRKKLQLVGVTAMLLACKY 269

Query: 305  EEVSVPVVEDLIVISDRAYTRNEVLEMETLMVNKLQFNLSVPTIYVFIKRFLKAAQSDHK 126
            EEVSVPVVEDLI+ISD+AY+RNEVL+ME  MVN LQFNLSVPT YVF++RFLKA+Q D K
Sbjct: 270  EEVSVPVVEDLILISDKAYSRNEVLDMEKNMVNALQFNLSVPTPYVFMRRFLKASQCDRK 329

Query: 125  LELLAFYMCELCLVEYEMLKFPPSMIAAAAVYTAQCTL 12
            LELLAF++ ELCLVEY MLKFPPS++AAAA+YTAQCTL
Sbjct: 330  LELLAFFIIELCLVEYNMLKFPPSVLAAAAIYTAQCTL 367


>ref|XP_002510675.1| cyclin B, putative [Ricinus communis] gi|223551376|gb|EEF52862.1|
            cyclin B, putative [Ricinus communis]
          Length = 438

 Score =  401 bits (1030), Expect = e-109
 Identities = 225/362 (62%), Positives = 262/362 (72%), Gaps = 18/362 (4%)
 Frame = -3

Query: 1037 PSNCQGGSMAG------------RTRRALRIIEQNYAGAAPYPCAVSKRGILTEKVAISV 894
            P N QGG  AG              RRAL  I +N  GA PYPCAV+KRG  +E+ AI  
Sbjct: 14   PVNVQGGLRAGVGKFTAAAATTGNNRRALSSINRNIIGAPPYPCAVNKRGP-SERQAICG 72

Query: 893  KDLQVPVVVHRPMTRKLVAQMASKQKQTVVEETMQPVPLLPVIND-KDCPIIDLDEY-KP 720
            K+  +PV  HRP+TRK  AQ+A+KQ Q   EE  +P   +P+ +D +DC IID ++Y K 
Sbjct: 73   KNPSIPV--HRPITRKFAAQLANKQ-QPKPEEIKKPDHSIPISSDPEDCTIIDAEDYNKT 129

Query: 719  KDSFPEPMIVQHTXXXXXXXXXXXXXXXXXXXXD----IDSGDKNNALAVVEYINDLYAH 552
               F  PM VQHT                    +    IDS DK N LAVVEYI+DLY  
Sbjct: 130  NGDFSVPMFVQHTEAMLEEIDRMEEVEMEDVVEEPFMDIDSYDKKNPLAVVEYIDDLYNF 189

Query: 551  YKNVENSSCVPSNYMTGQYDINERMRGILIDWLIEVHYKFELMQETLYLTVNLIDRFLAL 372
            Y+  E SSC PSNYM+ Q DINERMRGILIDWLIEVHYKFELM ETLYLTVNLIDRFLA+
Sbjct: 190  YRKAELSSCAPSNYMSQQSDINERMRGILIDWLIEVHYKFELMDETLYLTVNLIDRFLAV 249

Query: 371  YPVMRKKLQLVGVTAMLLACKYEEVSVPVVEDLIVISDRAYTRNEVLEMETLMVNKLQFN 192
            +PV+RKKLQLVGVTAMLLACKYEEVSVPVVEDLI+ISD+AY+R EVL+ME LMVN LQFN
Sbjct: 250  HPVVRKKLQLVGVTAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLDMEKLMVNTLQFN 309

Query: 191  LSVPTIYVFIKRFLKAAQSDHKLELLAFYMCELCLVEYEMLKFPPSMIAAAAVYTAQCTL 12
            +SVPT YVF++RFLKAAQSD KLELL+F++ ELCLVEYEMLKFPPS++AAAA+YTAQ TL
Sbjct: 310  VSVPTPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFPPSVLAAAAIYTAQSTL 369

Query: 11   GK 6
             +
Sbjct: 370  SR 371


>emb|CBI19854.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  389 bits (999), Expect = e-106
 Identities = 208/358 (58%), Positives = 256/358 (71%), Gaps = 16/358 (4%)
 Frame = -3

Query: 1037 PSNCQGGSMAG---------RTRRALRIIEQNYAGAAPYPCAVSKRGILTEKVAISVKDL 885
            P+N QGG  AG           RRAL  I++N  G  PYPCAV+KR +  ++ A   K  
Sbjct: 16   PANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNKRALSEKEAACDKK-- 73

Query: 884  QVPVVVHRPMTRKLVAQMAS-KQKQTVVEETMQPVPLLPVIND-KDCPIIDLDEYKPKDS 711
              P+ +HRP+TRK  AQMAS KQ++  + E  + + L    ++ KDC  +D ++ K    
Sbjct: 74   HPPIPMHRPITRKFAAQMASNKQQRAAIPEESRKLVLQSAPSELKDCVFVDAEDCKGTSD 133

Query: 710  FPEPMIVQHTXXXXXXXXXXXXXXXXXXXXD-----IDSGDKNNALAVVEYINDLYAHYK 546
             P PM VQHT                          ID  D  N+LAVVEYI+++YA+Y+
Sbjct: 134  LPVPMSVQHTEAMLEEIDRMEEEIEMEDLVKEPVMDIDGSDNKNSLAVVEYIDEIYAYYR 193

Query: 545  NVENSSCVPSNYMTGQYDINERMRGILIDWLIEVHYKFELMQETLYLTVNLIDRFLALYP 366
              E+SSCV  +YM+ Q+DIN+RMRGILIDWLIEVHYKFELM ETLYLTVNLIDRFLAL P
Sbjct: 194  KTESSSCVSPDYMSQQFDINDRMRGILIDWLIEVHYKFELMDETLYLTVNLIDRFLALQP 253

Query: 365  VMRKKLQLVGVTAMLLACKYEEVSVPVVEDLIVISDRAYTRNEVLEMETLMVNKLQFNLS 186
            V+RKKLQLVGVTAMLLACKYEEV+VP+VEDLI+ISD+AY+R EVL+ME LMVN LQFN+S
Sbjct: 254  VVRKKLQLVGVTAMLLACKYEEVTVPIVEDLILISDKAYSRKEVLDMEKLMVNTLQFNMS 313

Query: 185  VPTIYVFIKRFLKAAQSDHKLELLAFYMCELCLVEYEMLKFPPSMIAAAAVYTAQCTL 12
            VPT YVF++RFLKAAQSD KLELL+F++ ELCLVEYEMLKF PS++AAAA++TAQCTL
Sbjct: 314  VPTPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFSPSLLAAAAIFTAQCTL 371


>ref|XP_002280079.2| PREDICTED: cyclin-B2-4 [Vitis vinifera]
          Length = 437

 Score =  385 bits (990), Expect = e-105
 Identities = 207/356 (58%), Positives = 252/356 (70%), Gaps = 14/356 (3%)
 Frame = -3

Query: 1037 PSNCQGGSMAG---------RTRRALRIIEQNYAGAAPYPCAVSKRGILTEKVAISVKDL 885
            P+N QGG  AG           RRAL  I++N  G  PYPCAV+KR +  ++ A   K  
Sbjct: 16   PANNQGGLRAGVGKFTTGIGHNRRALSSIDRNIIGVPPYPCAVNKRALSEKEAACDKK-- 73

Query: 884  QVPVVVHRPMTRKLVAQMASKQKQTVVEETMQPVPLLPVINDKDCPIIDLDEYKPKDSFP 705
              P+ +HRP+TRK  AQMAS ++Q    E+ + V        KDC  +D ++ K     P
Sbjct: 74   HPPIPMHRPITRKFAAQMASNKQQRA--ESRKLVLQSAPSELKDCVFVDAEDCKGTSDLP 131

Query: 704  EPMIVQHTXXXXXXXXXXXXXXXXXXXXD-----IDSGDKNNALAVVEYINDLYAHYKNV 540
             PM VQHT                          ID  D  N+LAVVEYI+++YA+Y+  
Sbjct: 132  VPMSVQHTEAMLEEIDRMEEEIEMEDLVKEPVMDIDGSDNKNSLAVVEYIDEIYAYYRKT 191

Query: 539  ENSSCVPSNYMTGQYDINERMRGILIDWLIEVHYKFELMQETLYLTVNLIDRFLALYPVM 360
            E+SSCV  +YM+ Q+DIN+RMRGILIDWLIEVHYKFELM ETLYLTVNLIDRFLAL PV+
Sbjct: 192  ESSSCVSPDYMSQQFDINDRMRGILIDWLIEVHYKFELMDETLYLTVNLIDRFLALQPVV 251

Query: 359  RKKLQLVGVTAMLLACKYEEVSVPVVEDLIVISDRAYTRNEVLEMETLMVNKLQFNLSVP 180
            RKKLQLVGVTAMLLACKYEEV+VP+VEDLI+ISD+AY+R EVL+ME LMVN LQFN+SVP
Sbjct: 252  RKKLQLVGVTAMLLACKYEEVTVPIVEDLILISDKAYSRKEVLDMEKLMVNTLQFNMSVP 311

Query: 179  TIYVFIKRFLKAAQSDHKLELLAFYMCELCLVEYEMLKFPPSMIAAAAVYTAQCTL 12
            T YVF++RFLKAAQSD KLELL+F++ ELCLVEYEMLKF PS++AAAA++TAQCTL
Sbjct: 312  TPYVFMRRFLKAAQSDKKLELLSFFIIELCLVEYEMLKFSPSLLAAAAIFTAQCTL 367


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