BLASTX nr result

ID: Bupleurum21_contig00024882 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024882
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538229.1| PREDICTED: cellulose synthase-like protein G...   135   4e-30
ref|XP_003598039.1| Cellulose synthase [Medicago truncatula] gi|...   131   6e-29
ref|XP_003598038.1| Cellulose synthase [Medicago truncatula] gi|...   131   6e-29
ref|XP_003598037.1| Cellulose synthase [Medicago truncatula] gi|...   131   6e-29
ref|XP_003598036.1| Cellulose synthase [Medicago truncatula] gi|...   131   6e-29

>ref|XP_003538229.1| PREDICTED: cellulose synthase-like protein G1-like [Glycine max]
          Length = 696

 Score =  135 bits (339), Expect = 4e-30
 Identities = 64/131 (48%), Positives = 93/131 (70%), Gaps = 1/131 (0%)
 Frame = -2

Query: 391 NDPSSARQAMCFHLDPEMSRDLSYVQYPQIFYNVSQNDIYDGQARAAYKTKYQGMDGQRG 212
           NDPSSA+QAMCF LDPE S+D+++VQ+PQ+F+N+S  DIYD Q R A+ T +QGMDG RG
Sbjct: 282 NDPSSAKQAMCFFLDPETSKDIAFVQFPQMFHNLSMKDIYDSQHRHAFTTMWQGMDGLRG 341

Query: 211 TVCGGTGYYLNKKAL-YCTPDQQDNFYHQADEKFGSSSEFIASLKGRNKEDTFEMKILSN 35
               G+G YL++ AL + +P ++D + H A  KFG+S+ +I SLK    + T++  I  N
Sbjct: 342 PGLSGSGNYLSRSALIFPSPYEKDGYEHNAQNKFGNSTMYIESLKAIQGQQTYKTSISRN 401

Query: 34  AAIEEAEILAS 2
             ++EA+ +AS
Sbjct: 402 VILQEAQAVAS 412


>ref|XP_003598039.1| Cellulose synthase [Medicago truncatula]
           gi|355487087|gb|AES68290.1| Cellulose synthase [Medicago
           truncatula]
          Length = 563

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -2

Query: 391 NDPSSARQAMCFHLDPEMSRDLSYVQYPQIFYNVSQNDIYDGQARAAYKTKYQGMDGQRG 212
           NDPSSA+QAMCF LDPE S+ +++VQ+PQ+F+N+S+ DIYD Q+R A+KT +QGMDG RG
Sbjct: 279 NDPSSAKQAMCFFLDPETSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRG 338

Query: 211 TVCGGTGYYLNKKA-LYCTPDQQDNFYHQADEKFGSSSEFIASLKGRNKEDTFEMKILSN 35
               GTG YLN+ A L+ +P Q+D++   A   FG S+ +I SLK    + T +  +   
Sbjct: 339 PGLSGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKE 398

Query: 34  AAIEEAEILAS 2
             + EA+++AS
Sbjct: 399 EILREAQVVAS 409


>ref|XP_003598038.1| Cellulose synthase [Medicago truncatula]
           gi|355487086|gb|AES68289.1| Cellulose synthase [Medicago
           truncatula]
          Length = 428

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -2

Query: 391 NDPSSARQAMCFHLDPEMSRDLSYVQYPQIFYNVSQNDIYDGQARAAYKTKYQGMDGQRG 212
           NDPSSA+QAMCF LDPE S+ +++VQ+PQ+F+N+S+ DIYD Q+R A+KT +QGMDG RG
Sbjct: 279 NDPSSAKQAMCFFLDPETSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRG 338

Query: 211 TVCGGTGYYLNKKA-LYCTPDQQDNFYHQADEKFGSSSEFIASLKGRNKEDTFEMKILSN 35
               GTG YLN+ A L+ +P Q+D++   A   FG S+ +I SLK    + T +  +   
Sbjct: 339 PGLSGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKE 398

Query: 34  AAIEEAEILAS 2
             + EA+++AS
Sbjct: 399 EILREAQVVAS 409


>ref|XP_003598037.1| Cellulose synthase [Medicago truncatula]
           gi|355487085|gb|AES68288.1| Cellulose synthase [Medicago
           truncatula]
          Length = 694

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -2

Query: 391 NDPSSARQAMCFHLDPEMSRDLSYVQYPQIFYNVSQNDIYDGQARAAYKTKYQGMDGQRG 212
           NDPSSA+QAMCF LDPE S+ +++VQ+PQ+F+N+S+ DIYD Q+R A+KT +QGMDG RG
Sbjct: 279 NDPSSAKQAMCFFLDPETSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRG 338

Query: 211 TVCGGTGYYLNKKA-LYCTPDQQDNFYHQADEKFGSSSEFIASLKGRNKEDTFEMKILSN 35
               GTG YLN+ A L+ +P Q+D++   A   FG S+ +I SLK    + T +  +   
Sbjct: 339 PGLSGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKE 398

Query: 34  AAIEEAEILAS 2
             + EA+++AS
Sbjct: 399 EILREAQVVAS 409


>ref|XP_003598036.1| Cellulose synthase [Medicago truncatula]
           gi|355487084|gb|AES68287.1| Cellulose synthase [Medicago
           truncatula]
          Length = 694

 Score =  131 bits (329), Expect = 6e-29
 Identities = 63/131 (48%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
 Frame = -2

Query: 391 NDPSSARQAMCFHLDPEMSRDLSYVQYPQIFYNVSQNDIYDGQARAAYKTKYQGMDGQRG 212
           NDPSSA+QAMCF LDPE S+ +++VQ+PQ+F+N+S+ DIYD Q+R A+KT +QGMDG RG
Sbjct: 279 NDPSSAKQAMCFFLDPETSKYIAFVQFPQMFHNLSKKDIYDNQSRTAFKTMWQGMDGLRG 338

Query: 211 TVCGGTGYYLNKKA-LYCTPDQQDNFYHQADEKFGSSSEFIASLKGRNKEDTFEMKILSN 35
               GTG YLN+ A L+ +P Q+D++   A   FG S+ +I SLK    + T +  +   
Sbjct: 339 PGLSGTGNYLNRSALLFGSPVQKDDYLLDAQNYFGKSTTYIESLKAIRGQQTIKKNLSKE 398

Query: 34  AAIEEAEILAS 2
             + EA+++AS
Sbjct: 399 EILREAQVVAS 409


Top