BLASTX nr result

ID: Bupleurum21_contig00024880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024880
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334530.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]...    67   1e-09
ref|XP_003537850.1| PREDICTED: xylulose kinase-like [Glycine max]      67   2e-09
emb|CBI38013.3| unnamed protein product [Vitis vinifera]               64   2e-08

>ref|XP_002334530.1| predicted protein [Populus trichocarpa] gi|222872900|gb|EEF10031.1|
           predicted protein [Populus trichocarpa]
          Length = 113

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/79 (51%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
 Frame = +3

Query: 51  CSSKKL--SKRAGLLRKVDNPKYVRMCVVGSKANEGVNLLDSKRLYLGMDFGTSGARYAL 224
           CSS+KL  +++  L + V  P+ +    +   +N+   +L  +RLYLGMDFGTSGARYAL
Sbjct: 25  CSSRKLLVTRKDQLYKTVGKPRPI----MALASNKESGILVGERLYLGMDFGTSGARYAL 80

Query: 225 IDKDGIIHAEQKREYPKYM 281
           IDK GIIH+E KREYP +M
Sbjct: 81  IDKQGIIHSEGKREYPVFM 99


>ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|222850176|gb|EEE87723.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/47 (70%), Positives = 39/47 (82%)
 Frame = +3

Query: 141 ANEGVNLLDSKRLYLGMDFGTSGARYALIDKDGIIHAEQKREYPKYM 281
           +N+   +L  +RLYLGMDFGTSGARYALIDK GIIH+E KREYP +M
Sbjct: 5   SNKESGILVGERLYLGMDFGTSGARYALIDKQGIIHSEGKREYPVFM 51


>ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]
           gi|223547984|gb|EEF49476.1| xylulose kinase, putative
           [Ricinus communis]
          Length = 435

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 31/37 (83%), Positives = 33/37 (89%)
 Frame = +3

Query: 171 KRLYLGMDFGTSGARYALIDKDGIIHAEQKREYPKYM 281
           +RLYLGMDFGTSGARYALIDK G IH+E KREYP YM
Sbjct: 14  ERLYLGMDFGTSGARYALIDKQGSIHSEGKREYPLYM 50


>ref|XP_003537850.1| PREDICTED: xylulose kinase-like [Glycine max]
          Length = 474

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 37/63 (58%), Positives = 43/63 (68%)
 Frame = +3

Query: 93  KVDNPKYVRMCVVGSKANEGVNLLDSKRLYLGMDFGTSGARYALIDKDGIIHAEQKREYP 272
           KV  P+ V M V   +A E        RLYLG+DFGTSGAR+A+IDKDGII AE KREYP
Sbjct: 35  KVRKPRAVSMSV---RAGE--------RLYLGLDFGTSGARFAIIDKDGIIQAEAKREYP 83

Query: 273 KYM 281
            Y+
Sbjct: 84  LYL 86


>emb|CBI38013.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +3

Query: 51  CSSKKLSKRAGLLRKVDNPKYVRMCVVGSKANEG-VNLLDSKRLYLGMDFGTSGARYALI 227
           C+SKK   R  L +     K   M   GS  ++G V+     RLYLGMDFGTSGAR+ LI
Sbjct: 50  CNSKKPFWRHQLHKTATKAKARMMMNPGSNKDDGEVSGQVGHRLYLGMDFGTSGARFVLI 109

Query: 228 DKDGIIHAEQKREYP 272
           DK G I A+ KREYP
Sbjct: 110 DKQGTIQAQGKREYP 124


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