BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024879
         (442 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530223.1| pentatricopeptide repeat-containing protein,...   208   3e-52
ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containi...   206   2e-51
ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containi...   204   5e-51
ref|NP_194398.1| pentatricopeptide repeat-containing protein [Ar...   199   2e-49
ref|XP_002869597.1| pentatricopeptide repeat-containing protein ...   199   2e-49

>ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530270|gb|EEF32170.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  208 bits (530), Expect = 3e-52
 Identities = 104/147 (70%), Positives = 115/147 (78%)
 Frame = +2

Query: 2   VLSLEFFKWFRLKNPSFQTLETQSMILHILTKHRKFKSAETILKEILVSSSIDVPSKLFD 181
           VLSLEFF W + +NPS  TLET SMILHILTK+RKFKSAE ILK +LV   ID+P KLF+
Sbjct: 74  VLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFE 133

Query: 182 ALIQSYRVCDSSPRVFDSLFKTYAHMKKIRNATDTFCCMKNYGFLPTVESCNAXXXXXXX 361
           A++ SYR+CDSSPRVFDSLFKT AHMKK RNATDTF  MK YGFLPTVESCNA       
Sbjct: 134 AILYSYRMCDSSPRVFDSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLD 193

Query: 362 XXRGDIVLRFYKEMQRSRISPNIYTFN 442
             R DI L FYKEM+R RISPN+YT N
Sbjct: 194 LHRVDIALAFYKEMRRCRISPNVYTRN 220


>ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Vitis vinifera]
          Length = 616

 Score =  206 bits (524), Expect = 2e-51
 Identities = 101/147 (68%), Positives = 116/147 (78%)
 Frame = +2

Query: 2   VLSLEFFKWFRLKNPSFQTLETQSMILHILTKHRKFKSAETILKEILVSSSIDVPSKLFD 181
           VLS EFF W + +NP+ QTLET S+ILHILTK+ KFKSAE++LK IL S SID PSKLF+
Sbjct: 172 VLSFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFE 231

Query: 182 ALIQSYRVCDSSPRVFDSLFKTYAHMKKIRNATDTFCCMKNYGFLPTVESCNAXXXXXXX 361
           A++ SYR+CDSSP VFDSLFKTYA MKK+RNA D FC MK+YGFLP VESCNA       
Sbjct: 232 AILYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASIS 291

Query: 362 XXRGDIVLRFYKEMQRSRISPNIYTFN 442
             RGDI L FY+EMQR RISPN+YT N
Sbjct: 292 LQRGDIALTFYREMQRYRISPNVYTLN 318


>ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
           gi|449528063|ref|XP_004171026.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g26680,
           mitochondrial-like [Cucumis sativus]
          Length = 536

 Score =  204 bits (520), Expect = 5e-51
 Identities = 100/147 (68%), Positives = 115/147 (78%)
 Frame = +2

Query: 2   VLSLEFFKWFRLKNPSFQTLETQSMILHILTKHRKFKSAETILKEILVSSSIDVPSKLFD 181
           VLSLEFF W   +NPS  TLET  +ILHILTK RKFKSAE+IL+ I+ S SID PSKLF+
Sbjct: 96  VLSLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFE 155

Query: 182 ALIQSYRVCDSSPRVFDSLFKTYAHMKKIRNATDTFCCMKNYGFLPTVESCNAXXXXXXX 361
           +L+ SYR+CDSSP VFD LFKT+AH+KK RNA+DTFC MK+YGFLPTVESCNA       
Sbjct: 156 SLLYSYRLCDSSPHVFDLLFKTFAHLKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLN 215

Query: 362 XXRGDIVLRFYKEMQRSRISPNIYTFN 442
             RGDI L FY+EM+RSRI PN YT N
Sbjct: 216 FSRGDIALAFYREMRRSRIYPNSYTLN 242


>ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|334186944|ref|NP_001190849.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g26680, mitochondrial; Flags: Precursor
           gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis
           thaliana] gi|7269520|emb|CAB79523.1| putative protein
           [Arabidopsis thaliana] gi|332659836|gb|AEE85236.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana] gi|332659837|gb|AEE85237.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 521

 Score =  199 bits (507), Expect = 2e-49
 Identities = 93/147 (63%), Positives = 118/147 (80%)
 Frame = +2

Query: 2   VLSLEFFKWFRLKNPSFQTLETQSMILHILTKHRKFKSAETILKEILVSSSIDVPSKLFD 181
           +LSLEFF W + +NP   +LET +++LH LTK+RKFKSAE+IL+++LV+  +D+P+K+FD
Sbjct: 96  LLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155

Query: 182 ALIQSYRVCDSSPRVFDSLFKTYAHMKKIRNATDTFCCMKNYGFLPTVESCNAXXXXXXX 361
           AL+ SYR CDS+PRVFDSLFKT+AH+KK RNATDTF  MK+YGFLPTVESCNA       
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 362 XXRGDIVLRFYKEMQRSRISPNIYTFN 442
             R DI LRFY+EM+R +ISPN YT N
Sbjct: 216 QGRVDIALRFYREMRRCKISPNPYTLN 242


>ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297315433|gb|EFH45856.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 538

 Score =  199 bits (506), Expect = 2e-49
 Identities = 92/147 (62%), Positives = 118/147 (80%)
 Frame = +2

Query: 2   VLSLEFFKWFRLKNPSFQTLETQSMILHILTKHRKFKSAETILKEILVSSSIDVPSKLFD 181
           +LS EFF W + +NP+  +LET +++LH LTK+RKFKSAE+IL+++LV+  +D+P+K+FD
Sbjct: 96  LLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILRDVLVNGGVDLPAKVFD 155

Query: 182 ALIQSYRVCDSSPRVFDSLFKTYAHMKKIRNATDTFCCMKNYGFLPTVESCNAXXXXXXX 361
           AL+ SYR CDS+PRVFDSLFKT+AH+KK RNATDTF  MK+YGFLPTVESCNA       
Sbjct: 156 ALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLG 215

Query: 362 XXRGDIVLRFYKEMQRSRISPNIYTFN 442
             R DI LRFY+EM+R +ISPN YT N
Sbjct: 216 QGRVDIALRFYREMRRCKISPNTYTLN 242