BLASTX nr result

ID: Bupleurum21_contig00024864 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024864
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camel...    99   5e-19
ref|NP_001234728.1| ISPH protein [Solanum lycopersicum] gi|26217...    96   3e-18
gb|ABB55395.1| LYTB-like protein precursor-like [Solanum tuberosum]    96   4e-18
gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Campt...    92   3e-17
dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reducta...    91   1e-16

>gb|AFQ98369.1| hydroxymethylbutenyl diphosphate reductase [Camellia sinensis]
          Length = 459

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/93 (56%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = +2

Query: 152 MAIPLQFSRFSAATDFLSPEIKLFPCRNVFTSVRCAA-PSAAGSVAGETVFDTKEFRKNL 328
           MAI LQ  RF+  TD   P +++FPCR    SVRC+A  S + SVA +  FD K FRKNL
Sbjct: 1   MAISLQLCRFTTRTDISLPGLRVFPCRKPL-SVRCSAGESPSPSVAVDEDFDAKVFRKNL 59

Query: 329 TRKPNYNRKGFGRKDETLEDIKREYNSDILQTL 427
           TR  NYNR+GFG K+ETLE + REY SDI++TL
Sbjct: 60  TRSKNYNRRGFGHKEETLELMNREYTSDIIKTL 92


>ref|NP_001234728.1| ISPH protein [Solanum lycopersicum] gi|262176919|gb|ACY27516.1|
           ISPH protein [Solanum lycopersicum]
          Length = 461

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/94 (53%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = +2

Query: 152 MAIPLQFSRFSAATDFLSPEIKLFPCRNVFTSVRCAA--PSAAGSVAGETVFDTKEFRKN 325
           MAIPLQFS  S  TD   PE + F     F+ +RC+A  P  + S   E+ FD K FRKN
Sbjct: 1   MAIPLQFSSISTRTDLSLPETRTFRLPKPFSVIRCSAGEPVPSSSATAESEFDAKVFRKN 60

Query: 326 LTRKPNYNRKGFGRKDETLEDIKREYNSDILQTL 427
           LTR  NYNRKGFG K+ TLE + REY SDI++ L
Sbjct: 61  LTRSANYNRKGFGHKEATLELMNREYTSDIIKKL 94


>gb|ABB55395.1| LYTB-like protein precursor-like [Solanum tuberosum]
          Length = 462

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
 Frame = +2

Query: 152 MAIPLQFSRFSAATDFLSPEIKLFPCRNVFTSVRCAAPSA--AGSVAGETVFDTKEFRKN 325
           MAIPLQFS  S  TD   PE + F     F+ VRC+A  A  + S   E+ FD K FRKN
Sbjct: 1   MAIPLQFSSISTRTDLSLPETRTFRLPKPFSVVRCSAGDAVPSSSATAESEFDAKVFRKN 60

Query: 326 LTRKPNYNRKGFGRKDETLEDIKREYNSDILQTL 427
           LTR  NYNRKGFG K+ TLE + REY SDI++ L
Sbjct: 61  LTRSANYNRKGFGHKEATLELMNREYTSDIIKKL 94


>gb|ABI64152.1| hydroxymethylbutenyl diphosphate reductase [Camptotheca acuminata]
          Length = 459

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
 Frame = +2

Query: 152 MAIPLQFSRFSAATDFLSPEIKLFPCRNVFTSVRCAA-PSAAGSVAGETVFDTKEFRKNL 328
           MAI LQF R S   D    E K+F  R    SVRCA+  S + SVA ++ FD K FRKNL
Sbjct: 1   MAISLQFCRLSTRVDLSLLESKVFGYRKPL-SVRCASGESPSSSVAVDSDFDAKVFRKNL 59

Query: 329 TRKPNYNRKGFGRKDETLEDIKREYNSDILQTL 427
           TR  NYNRKGFG K+ETLE + REY SDI++TL
Sbjct: 60  TRSKNYNRKGFGHKEETLEPMNREYTSDIIKTL 92


>dbj|BAF98297.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Hevea
           brasiliensis]
          Length = 462

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 52/95 (54%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
 Frame = +2

Query: 152 MAIPLQFSRFSAATDFLSPEIKLFPCRNVFTSVRCAA---PSAAGSVAGETVFDTKEFRK 322
           MA+ LQ  R S  +D  S E      R  F SVRCAA    S+AGSVA E+ FD K FR 
Sbjct: 1   MAVSLQLCRVSLRSDLFSRENLAPLNRRKFLSVRCAAGGDESSAGSVAVESDFDAKVFRH 60

Query: 323 NLTRKPNYNRKGFGRKDETLEDIKREYNSDILQTL 427
           NLTR  NYNR+GFG K+ETLE + +EY SDI++TL
Sbjct: 61  NLTRSKNYNRRGFGHKEETLELMNQEYTSDIIKTL 95


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