BLASTX nr result

ID: Bupleurum21_contig00024863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024863
         (813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-lik...   265   9e-69
ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-lik...   263   3e-68
ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|2...   263   3e-68
ref|XP_003520496.1| PREDICTED: LIMR family protein At3g08930-lik...   263   4e-68
ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family ...   262   8e-68

>ref|XP_004148616.1| PREDICTED: LIMR family protein At3g08930-like [Cucumis sativus]
           gi|449522716|ref|XP_004168372.1| PREDICTED: LIMR family
           protein At3g08930-like [Cucumis sativus]
          Length = 509

 Score =  265 bits (677), Expect = 9e-69
 Identities = 131/162 (80%), Positives = 138/162 (85%)
 Frame = -3

Query: 733 HIVIYLLIDPPISSFLNQVFVKLDDAWGLLGTAAFAIFCFYLLLAVIAGETILGLKLIFI 554
           HIVIYLLIDPP+S FLN+VF+KLDD WGLLGTAAFA FCFYLLLAVIAG  +LGL+L+FI
Sbjct: 348 HIVIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFI 407

Query: 553 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGI 374
           TIHPMKWGATLMNSFLFNVGLILLCSISVIQFC             QEIFGHTLQSLRGI
Sbjct: 408 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYARATAAQEIFGHTLQSLRGI 467

Query: 373 KYLYKYNVFQYIFIGLAGLTFVYYALFGWRRKKRSGHFQLST 248
           KYLYKYNVFQ  FI LAGLTFVYYA FGWRRKK SG FQLS+
Sbjct: 468 KYLYKYNVFQIAFIALAGLTFVYYAAFGWRRKKLSGRFQLSS 509


>ref|XP_003552245.1| PREDICTED: LIMR family protein At5g01460-like [Glycine max]
          Length = 509

 Score =  263 bits (673), Expect = 3e-68
 Identities = 129/162 (79%), Positives = 138/162 (85%)
 Frame = -3

Query: 733 HIVIYLLIDPPISSFLNQVFVKLDDAWGLLGTAAFAIFCFYLLLAVIAGETILGLKLIFI 554
           HI+IYLLIDPP+S FLN+VF+KLDD WGLLGTAAFA FCFYLLLAVIAG  +LGL+L+FI
Sbjct: 348 HIIIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFI 407

Query: 553 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGI 374
           TIHPMKWGATLMNSFLFNVGLILLCSISVIQFC             QEIFGHTL+SLRGI
Sbjct: 408 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGI 467

Query: 373 KYLYKYNVFQYIFIGLAGLTFVYYALFGWRRKKRSGHFQLST 248
           KYLYKYNVFQ  F+ LAGLTFVYYA FGWRRKK SG FQLST
Sbjct: 468 KYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST 509


>ref|XP_002308217.1| predicted protein [Populus trichocarpa] gi|222854193|gb|EEE91740.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  263 bits (672), Expect = 3e-68
 Identities = 128/162 (79%), Positives = 138/162 (85%)
 Frame = -3

Query: 733 HIVIYLLIDPPISSFLNQVFVKLDDAWGLLGTAAFAIFCFYLLLAVIAGETILGLKLIFI 554
           HI+IYLL+DPP+S FLN+VF+KLDD WGLLGT AFA FCFYLLLAVIAG  +LGL+L+FI
Sbjct: 348 HIIIYLLVDPPLSPFLNEVFIKLDDIWGLLGTVAFAFFCFYLLLAVIAGAMMLGLRLVFI 407

Query: 553 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGI 374
           TIHPMKWGATLMNSFLFNVGLILLCSISVIQFC             QEIFGHTLQSLRGI
Sbjct: 408 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGI 467

Query: 373 KYLYKYNVFQYIFIGLAGLTFVYYALFGWRRKKRSGHFQLST 248
           KYLYKYNVFQ  F+ LAGLTFVYYA FGWRRKKRSG FQLS+
Sbjct: 468 KYLYKYNVFQISFVVLAGLTFVYYAAFGWRRKKRSGRFQLSS 509


>ref|XP_003520496.1| PREDICTED: LIMR family protein At3g08930-like [Glycine max]
          Length = 508

 Score =  263 bits (671), Expect = 4e-68
 Identities = 128/162 (79%), Positives = 138/162 (85%)
 Frame = -3

Query: 733 HIVIYLLIDPPISSFLNQVFVKLDDAWGLLGTAAFAIFCFYLLLAVIAGETILGLKLIFI 554
           HI+IYLLIDPP+S FLN+VF+KLDD WGLLGTAAFA FCFYLLLAVIAG  +LGL+L+FI
Sbjct: 347 HIIIYLLIDPPLSPFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFI 406

Query: 553 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGI 374
           TIHPMKWGATLMNSFLFNVGLILLCSISVIQFC             QEIFGHTL+SLRGI
Sbjct: 407 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGI 466

Query: 373 KYLYKYNVFQYIFIGLAGLTFVYYALFGWRRKKRSGHFQLST 248
           KYLYKYNVFQ  F+ LAGLTFVYYA FGWRRKK SG FQLS+
Sbjct: 467 KYLYKYNVFQIAFVALAGLTFVYYAAFGWRRKKPSGRFQLSS 508


>ref|XP_003548743.1| PREDICTED: LOW QUALITY PROTEIN: LIMR family protein At5g01460-like
           [Glycine max]
          Length = 400

 Score =  262 bits (669), Expect = 8e-68
 Identities = 128/162 (79%), Positives = 137/162 (84%)
 Frame = -3

Query: 733 HIVIYLLIDPPISSFLNQVFVKLDDAWGLLGTAAFAIFCFYLLLAVIAGETILGLKLIFI 554
           HI+IYLLIDPP+S FLN+VF+KLDD WGLLGTAAFA FCFYLLLAVIAG  +LGL+L+FI
Sbjct: 239 HIIIYLLIDPPLSPFLNEVFIKLDDVWGLLGTAAFAFFCFYLLLAVIAGAMMLGLRLVFI 298

Query: 553 TIHPMKWGATLMNSFLFNVGLILLCSISVIQFCXXXXXXXXXXXXXQEIFGHTLQSLRGI 374
           TIHPMKWG TLMNSFLFNVGLILLCSISVIQFC             QEIFGHTL+SLRGI
Sbjct: 299 TIHPMKWGGTLMNSFLFNVGLILLCSISVIQFCSTAFAYYAQATAAQEIFGHTLESLRGI 358

Query: 373 KYLYKYNVFQYIFIGLAGLTFVYYALFGWRRKKRSGHFQLST 248
           KYLYKYNVFQ  F+ LAGLTFVYYA FGWRRKK SG FQLST
Sbjct: 359 KYLYKYNVFQIAFVVLAGLTFVYYAAFGWRRKKPSGRFQLST 400


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