BLASTX nr result

ID: Bupleurum21_contig00024856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024856
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325606.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_004172747.1| PREDICTED: ion channel CASTOR-like, partial ...   168   4e-40
ref|XP_004135518.1| PREDICTED: ion channel CASTOR-like [Cucumis ...   168   4e-40
emb|CBI24699.3| unnamed protein product [Vitis vinifera]              168   5e-40
ref|XP_002274786.1| PREDICTED: ion channel CASTOR-like [Vitis vi...   168   5e-40

>ref|XP_002325606.1| predicted protein [Populus trichocarpa] gi|222862481|gb|EEE99987.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  169 bits (428), Expect = 2e-40
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 268 LFGVTDDSITDCLWLSWTFVADSGNHANSEGLGPRLVSVAISFGGMLIFAMMLGLVSDSI 89
           LFGVTDD++ DCLWLSWTFVADSGNHAN+EG+GPRLVSV+ISFGGMLIFAMMLGLVSD+I
Sbjct: 93  LFGVTDDNLADCLWLSWTFVADSGNHANTEGIGPRLVSVSISFGGMLIFAMMLGLVSDAI 152

Query: 88  SEKLDSLRKGRSEVVKQNHTLILGWSDKL 2
           SEK DSLRKGRSEVV+QNHTLILGWSDKL
Sbjct: 153 SEKFDSLRKGRSEVVEQNHTLILGWSDKL 181


>ref|XP_004172747.1| PREDICTED: ion channel CASTOR-like, partial [Cucumis sativus]
          Length = 372

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/89 (89%), Positives = 86/89 (96%)
 Frame = -1

Query: 268 LFGVTDDSITDCLWLSWTFVADSGNHANSEGLGPRLVSVAISFGGMLIFAMMLGLVSDSI 89
           LFGVTDDS+ DCLWLSWT+VADSGNHANSEG GPRLVSV++SFGGMLIFAMMLGLVSDSI
Sbjct: 284 LFGVTDDSLVDCLWLSWTYVADSGNHANSEGFGPRLVSVSVSFGGMLIFAMMLGLVSDSI 343

Query: 88  SEKLDSLRKGRSEVVKQNHTLILGWSDKL 2
           SEK DSLRKGRSEVV+Q+HTLILGWSDKL
Sbjct: 344 SEKFDSLRKGRSEVVEQDHTLILGWSDKL 372


>ref|XP_004135518.1| PREDICTED: ion channel CASTOR-like [Cucumis sativus]
          Length = 882

 Score =  168 bits (426), Expect = 4e-40
 Identities = 80/89 (89%), Positives = 86/89 (96%)
 Frame = -1

Query: 268 LFGVTDDSITDCLWLSWTFVADSGNHANSEGLGPRLVSVAISFGGMLIFAMMLGLVSDSI 89
           LFGVTDDS+ DCLWLSWT+VADSGNHANSEG GPRLVSV++SFGGMLIFAMMLGLVSDSI
Sbjct: 273 LFGVTDDSLVDCLWLSWTYVADSGNHANSEGFGPRLVSVSVSFGGMLIFAMMLGLVSDSI 332

Query: 88  SEKLDSLRKGRSEVVKQNHTLILGWSDKL 2
           SEK DSLRKGRSEVV+Q+HTLILGWSDKL
Sbjct: 333 SEKFDSLRKGRSEVVEQDHTLILGWSDKL 361


>emb|CBI24699.3| unnamed protein product [Vitis vinifera]
          Length = 911

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 268 LFGVTDDSITDCLWLSWTFVADSGNHANSEGLGPRLVSVAISFGGMLIFAMMLGLVSDSI 89
           LFGVT DS+ DCLWLSWT++ADSGNHANSEG+GPRLVSV+ISFGGMLIFAMMLGLVSD+I
Sbjct: 268 LFGVTVDSLADCLWLSWTYIADSGNHANSEGIGPRLVSVSISFGGMLIFAMMLGLVSDAI 327

Query: 88  SEKLDSLRKGRSEVVKQNHTLILGWSDKL 2
           SEKLDSLRKGRSEVV+QNHTLILGWSDKL
Sbjct: 328 SEKLDSLRKGRSEVVEQNHTLILGWSDKL 356


>ref|XP_002274786.1| PREDICTED: ion channel CASTOR-like [Vitis vinifera]
          Length = 878

 Score =  168 bits (425), Expect = 5e-40
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = -1

Query: 268 LFGVTDDSITDCLWLSWTFVADSGNHANSEGLGPRLVSVAISFGGMLIFAMMLGLVSDSI 89
           LFGVT DS+ DCLWLSWT++ADSGNHANSEG+GPRLVSV+ISFGGMLIFAMMLGLVSD+I
Sbjct: 268 LFGVTVDSLADCLWLSWTYIADSGNHANSEGIGPRLVSVSISFGGMLIFAMMLGLVSDAI 327

Query: 88  SEKLDSLRKGRSEVVKQNHTLILGWSDKL 2
           SEKLDSLRKGRSEVV+QNHTLILGWSDKL
Sbjct: 328 SEKLDSLRKGRSEVVEQNHTLILGWSDKL 356


Top