BLASTX nr result

ID: Bupleurum21_contig00024851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024851
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321401.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06
ref|NP_001132336.1| uncharacterized protein LOC100193778 [Zea ma...    55   8e-06

>ref|XP_002321401.1| predicted protein [Populus trichocarpa] gi|222868397|gb|EEF05528.1|
           predicted protein [Populus trichocarpa]
          Length = 381

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/116 (31%), Positives = 55/116 (47%)
 Frame = +3

Query: 57  YNLFPHLQVYRTR*DIFQARPSLYM*WCSISGCMVE**GXXXXXXXXXXXXXXXNMLRKK 236
           YNLF  LQVYRTR D+  A P +     S+ G M++  G               N +  +
Sbjct: 254 YNLFSRLQVYRTREDMVLALPCISDGAISLDGGMMKGTGIFSLGNR--------NNVDVR 305

Query: 237 FTSISGLSNLPANCYEIEESLKIEKWNQETLLDDLQRE*SLWTRRSSILRSRNKSF 404
           F  +S  S LP N  + E+ LK  KW +E +L+D++RE +L          + + F
Sbjct: 306 FPKLSVTSTLPDNYIDTEKQLKETKWKREKMLEDIKREQALLDAAKQSFERKKEEF 361


>ref|NP_001132336.1| uncharacterized protein LOC100193778 [Zea mays]
           gi|194694114|gb|ACF81141.1| unknown [Zea mays]
           gi|195639416|gb|ACG39176.1| hypothetical protein [Zea
           mays] gi|238005714|gb|ACR33892.1| unknown [Zea mays]
           gi|414875590|tpg|DAA52721.1| TPA: hypothetical protein
           ZEAMMB73_105164 [Zea mays] gi|414875591|tpg|DAA52722.1|
           TPA: hypothetical protein ZEAMMB73_105164 [Zea mays]
          Length = 405

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/114 (31%), Positives = 56/114 (49%)
 Frame = +3

Query: 57  YNLFPHLQVYRTR*DIFQARPSLYM*WCSISGCMVE**GXXXXXXXXXXXXXXXNMLRKK 236
           Y LF HLQVY+TR DI  A P +     S+ G ++   G                 L  K
Sbjct: 259 YTLFSHLQVYKTRTDIQSALPLIKDGAVSLDGGLLRPNGSFCLGHSKN--------LEVK 310

Query: 237 FTSISGLSNLPANCYEIEESLKIEKWNQETLLDDLQRE*SLWTRRSSILRSRNK 398
           F   + +S+LP N  E+EE +K + W +E +L+D++RE  L  +   + R + +
Sbjct: 311 FPVTTDVSSLPENVAEMEEQVKRKNWEKEMVLEDMKREEDLLKQVKELYRKQKQ 364


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