BLASTX nr result

ID: Bupleurum21_contig00024849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024849
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156548.1| PREDICTED: WD repeat-containing protein 18-l...    57   5e-06
ref|XP_004137310.1| PREDICTED: WD repeat-containing protein 18-l...    57   5e-06

>ref|XP_004156548.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
          Length = 374

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
 Frame = -1

Query: 701 VAVSHVSAATGLGSVQFTSITINWCCNTPFHTLA---------ATSDELYLFVGDLSGQT 549
           +AVSH+   T  GS+       NW  ++ F  L          AT D  YLF G LSG  
Sbjct: 50  IAVSHICPVTASGSIHI----YNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYI 105

Query: 548 HTLSLPLGDQVQSFPAPRKPL 486
           H LSLP GD + S PA +KP+
Sbjct: 106 HILSLPSGDVLNSLPAHKKPV 126


>ref|XP_004137310.1| PREDICTED: WD repeat-containing protein 18-like [Cucumis sativus]
          Length = 412

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 33/81 (40%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
 Frame = -1

Query: 701 VAVSHVSAATGLGSVQFTSITINWCCNTPFHTLA---------ATSDELYLFVGDLSGQT 549
           +AVSH+   T  GS+       NW  ++ F  L          AT D  YLF G LSG  
Sbjct: 50  IAVSHICPVTASGSIHI----YNWWTSSAFQCLTVPEPVAPLTATPDGFYLFAGGLSGYI 105

Query: 548 HTLSLPLGDQVQSFPAPRKPL 486
           H LSLP GD + S PA +KP+
Sbjct: 106 HILSLPSGDVLNSLPAHKKPV 126


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