BLASTX nr result

ID: Bupleurum21_contig00024848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024848
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17070.3| unnamed protein product [Vitis vinifera]              171   7e-41
ref|XP_002312900.1| predicted protein [Populus trichocarpa] gi|2...   157   9e-37
dbj|BAF37796.1| hypothetical protein [Ipomoea trifida]                152   3e-35
gb|AAS79607.1| hypothetical protein [Ipomoea trifida]                 152   3e-35
ref|XP_002265236.2| PREDICTED: uncharacterized protein LOC100267...   135   3e-30

>emb|CBI17070.3| unnamed protein product [Vitis vinifera]
          Length = 975

 Score =  171 bits (432), Expect = 7e-41
 Identities = 89/147 (60%), Positives = 109/147 (74%), Gaps = 6/147 (4%)
 Frame = +1

Query: 1    VVIIHNSSLNINDVDERVIISIEALESILREMGF-GDKIKVCRGRPANHSIMVVRFNSTL 177
            VVI+HNSS+  +D DER+I++I+ L +ILR+MGF G K ++CRG+PAN SIMVVRFN+T 
Sbjct: 825  VVIVHNSSIGNSDPDERMIVTIDMLVTILRDMGFDGGKTQICRGKPANQSIMVVRFNATF 884

Query: 178  SGLQAAERLHNSYAETKHGKSEFENIXXXXXXRTP-----KASEKKAEHVLYGYLGIAED 342
            SGLQ AE+LHN YAE +HG++EF  I       +      KA   K EHVLYGYLGIA D
Sbjct: 885  SGLQKAEKLHNMYAENQHGRAEFHQINFNNGKTSSCRENRKAQADKVEHVLYGYLGIAGD 944

Query: 343  LDKLDFETKKRCLVKSKKEIKLIAMQP 423
            LDKLDFE K+RC+VKSKKEI  IA  P
Sbjct: 945  LDKLDFEAKERCVVKSKKEIWAIADVP 971


>ref|XP_002312900.1| predicted protein [Populus trichocarpa] gi|222849308|gb|EEE86855.1|
           predicted protein [Populus trichocarpa]
          Length = 202

 Score =  157 bits (397), Expect = 9e-37
 Identities = 81/139 (58%), Positives = 99/139 (71%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   VVIIHNSSLNINDVDERVIISIEALESILREMGFGDKI-KVCRGRPANHSIMVVRFNSTL 177
           VV+IHN S+  ++ DER+I+S+E L  ILR MGFG  I  +CRG+ AN S MVV F  T 
Sbjct: 57  VVVIHNRSIANDNPDERIIVSVEGLRHILRGMGFGQGITNICRGKAANQSTMVVIFGQTF 116

Query: 178 SGLQAAERLHNSYAETKHGKSEFENIXXXXXXRTPKASEKKAEHVLYGYLGIAEDLDKLD 357
           SGLQ AERLH  YAE+K G++EF+ I      +T   S    E+VLYGYLGI+ DLDKLD
Sbjct: 117 SGLQGAERLHKLYAESKRGRTEFQQIGLHGSLQTQGVSSNTKENVLYGYLGISIDLDKLD 176

Query: 358 FETKKRCLVKSKKEIKLIA 414
           FE KKRC+VKSKKEIK +A
Sbjct: 177 FEIKKRCVVKSKKEIKAVA 195


>dbj|BAF37796.1| hypothetical protein [Ipomoea trifida]
          Length = 1104

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/140 (55%), Positives = 103/140 (73%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    VVIIHNSSLNINDVDERVIISIEALESILREMGFGDKIKVCRGRPANHSIMVVRFNSTLS 180
            VV+IHN ++   + DERV++S+E LE+ LR+MGFG K  VCRG+P N S++VV+F +TLS
Sbjct: 965  VVVIHNITITNTNPDERVVVSVEELETKLRDMGFGGK--VCRGKPGNLSVLVVKFAATLS 1022

Query: 181  GLQAAERLHNSYAETKHGKSEFENIXXXXXXRTPKAS-EKKAEHVLYGYLGIAEDLDKLD 357
            GLQ AERL N YAETKHG++EFE +         +     K E +LYGYLGI EDLDKLD
Sbjct: 1023 GLQEAERLGNLYAETKHGRAEFEQVSTGSCVSNEQVPLADKTEEILYGYLGIVEDLDKLD 1082

Query: 358  FETKKRCLVKSKKEIKLIAM 417
            FE+K+R  +KSKKEI+ I++
Sbjct: 1083 FESKRRSKLKSKKEIQSISV 1102


>gb|AAS79607.1| hypothetical protein [Ipomoea trifida]
          Length = 1082

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/140 (55%), Positives = 103/140 (73%), Gaps = 1/140 (0%)
 Frame = +1

Query: 1    VVIIHNSSLNINDVDERVIISIEALESILREMGFGDKIKVCRGRPANHSIMVVRFNSTLS 180
            VV+IHN ++   + DERV++S+E LE+ LR+MGFG K  VCRG+P N S++VV+F +TLS
Sbjct: 943  VVVIHNITITNTNPDERVVVSVEELETKLRDMGFGGK--VCRGKPGNLSVLVVKFAATLS 1000

Query: 181  GLQAAERLHNSYAETKHGKSEFENIXXXXXXRTPKAS-EKKAEHVLYGYLGIAEDLDKLD 357
            GLQ AERL N YAETKHG++EFE +         +     K E +LYGYLGI EDLDKLD
Sbjct: 1001 GLQEAERLGNLYAETKHGRAEFEQVSTGSCVSNEQVPLADKTEEILYGYLGIVEDLDKLD 1060

Query: 358  FETKKRCLVKSKKEIKLIAM 417
            FE+K+R  +KSKKEI+ I++
Sbjct: 1061 FESKRRSKLKSKKEIQSISV 1080


>ref|XP_002265236.2| PREDICTED: uncharacterized protein LOC100267656 [Vitis vinifera]
          Length = 403

 Score =  135 bits (341), Expect = 3e-30
 Identities = 71/151 (47%), Positives = 102/151 (67%), Gaps = 6/151 (3%)
 Frame = +1

Query: 1   VVIIHNSSLNINDVDERVIISIEALESILREMGFGD-KIKVCRGRPANHSIMVVRFNSTL 177
           +VIIHN S++ +D +E  +++IEAL + LR  GFG  K K+C G+PA+HS+MVV+F  T 
Sbjct: 253 LVIIHNISISNSDPEEWKLVTIEALGAFLRGKGFGGGKFKMCLGKPADHSVMVVKFLGTF 312

Query: 178 SGLQAAERLHNSYAETKHGKSEFENIXXXXXXRTPKAS-----EKKAEHVLYGYLGIAED 342
           SGL+ A +LH  YA   HG+++ E I       +         +K  E VLYGY+GIAED
Sbjct: 313 SGLEDAVKLHKYYAGNNHGRADLEKINYNNGKSSSSTEAGMQPDKPEEVVLYGYMGIAED 372

Query: 343 LDKLDFETKKRCLVKSKKEIKLIAMQP*KTE 435
           LDKLDF++K+RCL++SK+EI+ +A  P K +
Sbjct: 373 LDKLDFDSKRRCLIQSKQEIRELADAPVKPD 403


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