BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024846
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510791.1| pentatricopeptide repeat-containing protein,...   171   2e-40
emb|CBI22748.3| unnamed protein product [Vitis vinifera]              162   1e-37
ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containi...   162   1e-37
ref|XP_002321917.1| predicted protein [Populus trichocarpa] gi|2...   157   4e-36
ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containi...   145   2e-32

>ref|XP_002510791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549906|gb|EEF51393.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 475

 Score =  171 bits (433), Expect = 2e-40
 Identities = 93/186 (50%), Positives = 118/186 (63%), Gaps = 3/186 (1%)
 Frame = -3

Query: 549 MFTVALYGKRVLKSISFICGISRSFCGFSINSDGLHDGFKRVEEHLNVNEKSWDFGSGLD 370
           M T+AL G R++   S+I   SR  C  S + D   +GF+ +EE L    K+ DFGS   
Sbjct: 1   MNTIALSGTRMVHKFSYILVFSRKLCDCSFDGDKSDNGFRYIEEPLKRLWKNSDFGSCGS 60

Query: 369 EEPV---FPSGKRFFEQARYDARRALEVLYRDDPTFDANEALDCMQIRISGVLVREVLYR 199
           E      +   K FFE  R DA R L++L +D P FDA  AL  + +R+SG+LVREVL  
Sbjct: 61  ENRDNGNYSQRKWFFENVRIDAARVLDILRQDGPGFDAKAALSELDLRVSGLLVREVLAG 120

Query: 198 ILTDINDANKTRNARLGYKFFRWSGQQESYSHTVYSYHLMLKIFADSNELKAMWRLVDEM 19
           IL +I   NKTR A+LGYKFF WS QQE+Y HT  +YHL++KIFAD  E KAMWRL+DEM
Sbjct: 121 ILRNIGIDNKTRCAKLGYKFFIWSSQQENYRHTANNYHLIMKIFADCEEFKAMWRLLDEM 180

Query: 18  IERGCP 1
           +E G P
Sbjct: 181 VENGFP 186


>emb|CBI22748.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  162 bits (410), Expect = 1e-37
 Identities = 97/223 (43%), Positives = 126/223 (56%), Gaps = 40/223 (17%)
 Frame = -3

Query: 549 MFTVALYGKRVLKSISFICGISRSFCGFSINSDG--LHDGFKRVEEHLNVNEK------- 397
           M ++AL+G R+ +     C  SRSF   + NSDG  + DGF RV+    +++K       
Sbjct: 5   MNSIALFGPRLFRIFPCFCRSSRSFS--TKNSDGGEMDDGFMRVKNGGEMDDKFMRIENG 62

Query: 396 ----------------SW---------------DFGSGLDEEPVFPSGKRFFEQARYDAR 310
                           +W               D G G      F +GK +F+  R DA 
Sbjct: 63  GEMDDGFMRIEKPLSEAWGVSNFDPVSDENPDSDNGIGSSSPAEFLAGKGYFDNMRLDAS 122

Query: 309 RALEVLYRDDPTFDANEALDCMQIRISGVLVREVLYRILTDINDANKTRNARLGYKFFRW 130
           R L++L +D P F    ALD +QIR+SG LVREVL  IL  +N  NK R A+LGYKFF W
Sbjct: 123 RVLQILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMW 182

Query: 129 SGQQESYSHTVYSYHLMLKIFADSNELKAMWRLVDEMIERGCP 1
           SGQQE+Y HTV +YHL++KIFA+S+E KAMWRLVDEMIE+G P
Sbjct: 183 SGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFP 225


>ref|XP_002268211.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g55630-like [Vitis vinifera]
          Length = 514

 Score =  162 bits (410), Expect = 1e-37
 Identities = 97/223 (43%), Positives = 126/223 (56%), Gaps = 40/223 (17%)
 Frame = -3

Query: 549 MFTVALYGKRVLKSISFICGISRSFCGFSINSDG--LHDGFKRVEEHLNVNEK------- 397
           M ++AL+G R+ +     C  SRSF   + NSDG  + DGF RV+    +++K       
Sbjct: 1   MNSIALFGPRLFRIFPCFCRSSRSFS--TKNSDGGEMDDGFMRVKNGGEMDDKFMRIENG 58

Query: 396 ----------------SW---------------DFGSGLDEEPVFPSGKRFFEQARYDAR 310
                           +W               D G G      F +GK +F+  R DA 
Sbjct: 59  GEMDDGFMRIEKPLSEAWGVSNFDPVSDENPDSDNGIGSSSPAEFLAGKGYFDNMRLDAS 118

Query: 309 RALEVLYRDDPTFDANEALDCMQIRISGVLVREVLYRILTDINDANKTRNARLGYKFFRW 130
           R L++L +D P F    ALD +QIR+SG LVREVL  IL  +N  NK R A+LGYKFF W
Sbjct: 119 RVLQILQQDCPGFSTKAALDELQIRVSGGLVREVLLEILKTVNYTNKERCAKLGYKFFMW 178

Query: 129 SGQQESYSHTVYSYHLMLKIFADSNELKAMWRLVDEMIERGCP 1
           SGQQE+Y HTV +YHL++KIFA+S+E KAMWRLVDEMIE+G P
Sbjct: 179 SGQQENYRHTVNAYHLIMKIFAESDEFKAMWRLVDEMIEQGFP 221


>ref|XP_002321917.1| predicted protein [Populus trichocarpa] gi|222868913|gb|EEF06044.1|
           predicted protein [Populus trichocarpa]
          Length = 271

 Score =  157 bits (396), Expect = 4e-36
 Identities = 87/186 (46%), Positives = 116/186 (62%), Gaps = 5/186 (2%)
 Frame = -3

Query: 549 MFTVALYGKRVLKSISFICGISRSFCGFSINS-DGLHDGFKRVEEHLNVNEKSWDFGS-- 379
           M +VAL+G RV+        +SR  C +S +  D   +GF+ VEE L    KS DF S  
Sbjct: 1   MNSVALFGMRVVHKFLCFPSVSRRLCDYSFDGGDNNDNGFQYVEEPLKRMYKSSDFDSFQ 60

Query: 378 --GLDEEPVFPSGKRFFEQARYDARRALEVLYRDDPTFDANEALDCMQIRISGVLVREVL 205
                EE  F   + + E  R DA R L++L RD P FDA  AL  ++I++S +LVREV 
Sbjct: 61  SESCVEEEHFSVRRSYVECTRIDADRVLDILRRDGPGFDAKRALSELEIKVSWLLVREVF 120

Query: 204 YRILTDINDANKTRNARLGYKFFRWSGQQESYSHTVYSYHLMLKIFADSNELKAMWRLVD 25
             IL +IN+ NKTR A+LG+KFF WS QQ +Y HT  SYHL++KIFA+  E +AMW+L D
Sbjct: 121 TGILRNINEENKTRCAKLGFKFFMWSDQQGNYKHTGNSYHLLMKIFAECEEFRAMWKLAD 180

Query: 24  EMIERG 7
           EM+E+G
Sbjct: 181 EMVEKG 186


>ref|XP_003556106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g60050-like isoform 1 [Glycine max]
           gi|356575967|ref|XP_003556107.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g60050-like isoform 2 [Glycine max]
          Length = 480

 Score =  145 bits (365), Expect = 2e-32
 Identities = 85/194 (43%), Positives = 109/194 (56%), Gaps = 11/194 (5%)
 Frame = -3

Query: 549 MFTVALYGKRVLKSISFICGISRSFCGFSINSDGLH-----------DGFKRVEEHLNVN 403
           M +V L G + +   S    I R  C    + DG             D    V+E L+VN
Sbjct: 1   MNSVTLLGSKRVHKCSHSLIILRRLCNHPFDGDGFEFIEEPLKKLGSDYDSTVDERLHVN 60

Query: 402 EKSWDFGSGLDEEPVFPSGKRFFEQARYDARRALEVLYRDDPTFDANEALDCMQIRISGV 223
           E  W F     ++  F   K F E  + DA+R LEVL +D P  DA   L  + +R SG+
Sbjct: 61  E-DWGF-----KQKQFSLRKGFLETVKLDAKRVLEVLRQDGPGLDARLVLGELHVRPSGL 114

Query: 222 LVREVLYRILTDINDANKTRNARLGYKFFRWSGQQESYSHTVYSYHLMLKIFADSNELKA 43
           LVREVL+ IL +IN  NKTR A+L YKFF W  QQE Y HTV +YHL++ I+A+  E KA
Sbjct: 115 LVREVLFGILKNINCQNKTRCAKLAYKFFVWCSQQEGYQHTVNAYHLVMSIYAECEEFKA 174

Query: 42  MWRLVDEMIERGCP 1
           +WRLVDEMIE+G P
Sbjct: 175 LWRLVDEMIEKGLP 188