BLASTX nr result

ID: Bupleurum21_contig00024845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024845
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus...   151   5e-35
ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR famil...   149   2e-34
emb|CBI20796.3| unnamed protein product [Vitis vinifera]              149   2e-34
ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_002871074.1| short-chain dehydrogenase/reductase family p...   147   7e-34

>ref|XP_002511230.1| short-chain dehydrogenase, putative [Ricinus communis]
           gi|223550345|gb|EEF51832.1| short-chain dehydrogenase,
           putative [Ricinus communis]
          Length = 369

 Score =  151 bits (382), Expect = 5e-35
 Identities = 78/153 (50%), Positives = 101/153 (66%)
 Frame = +2

Query: 5   SYVRLIAYSLFARDSKCYARCYPTNEDITKSSVVRKPICVIXXXXXXXXXXXXXXXXRNG 184
           SY  L   ++F R S  Y  C+P       +S + +P+CVI                R G
Sbjct: 31  SYFELYFQNMFGRSSHPYPHCFPP------TSGIARPLCVITGATSGLGEAAAYALSREG 84

Query: 185 FYVVLAGRSSHLLSKIISEIKEQNHAADLKAFHLDISSFGSILKFKTALQQWLLDADLHC 364
           F+VVLAGRSS LLSK +  I +QN  A +KAF +D++SF SI+KFK +L++WLLD+D+H 
Sbjct: 85  FFVVLAGRSSKLLSKTVERINKQNRDAQVKAFEVDLTSFQSIIKFKGSLEKWLLDSDMHS 144

Query: 365 SIQLLINNAGILATSYRCTSEGYDQMMGTNYIG 463
           SIQLLINNAGILATS R T+EGYD+MM TNY+G
Sbjct: 145 SIQLLINNAGILATSQRLTTEGYDEMMVTNYVG 177


>ref|XP_002280887.2| PREDICTED: dehydrogenase/reductase SDR family member on chromosome
           X-like [Vitis vinifera]
          Length = 467

 Score =  149 bits (376), Expect = 2e-34
 Identities = 81/155 (52%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   LSYVRLIAYSL-FARDSKCYARCYPTNEDITKSSVVRKPICVIXXXXXXXXXXXXXXXXR 178
           +SY+ L      F+R S  Y RC P N      +   +P+C+I                +
Sbjct: 32  ISYLHLFIQRFPFSRKSNSYPRCPPAN------TATFRPLCIITGATSGLGKAAAYALSK 85

Query: 179 NGFYVVLAGRSSHLLSKIISEIKEQNHAADLKAFHLDISSFGSILKFKTALQQWLLDADL 358
            GFYVVL GRSSHLLSK + EIKE+N  A LK F +D+SSF SILKFK +L+QWL D+++
Sbjct: 86  EGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLADSNM 145

Query: 359 HCSIQLLINNAGILATSYRCTSEGYDQMMGTNYIG 463
           H SIQLLINNAGILATS R T+EG DQMM TNY+G
Sbjct: 146 HSSIQLLINNAGILATSCRLTTEGCDQMMATNYMG 180


>emb|CBI20796.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  149 bits (376), Expect = 2e-34
 Identities = 81/155 (52%), Positives = 100/155 (64%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   LSYVRLIAYSL-FARDSKCYARCYPTNEDITKSSVVRKPICVIXXXXXXXXXXXXXXXXR 178
           +SY+ L      F+R S  Y RC P N      +   +P+C+I                +
Sbjct: 11  ISYLHLFIQRFPFSRKSNSYPRCPPAN------TATFRPLCIITGATSGLGKAAAYALSK 64

Query: 179 NGFYVVLAGRSSHLLSKIISEIKEQNHAADLKAFHLDISSFGSILKFKTALQQWLLDADL 358
            GFYVVL GRSSHLLSK + EIKE+N  A LK F +D+SSF SILKFK +L+QWL D+++
Sbjct: 65  EGFYVVLVGRSSHLLSKTMVEIKEKNKNAHLKGFQVDLSSFHSILKFKGSLEQWLADSNM 124

Query: 359 HCSIQLLINNAGILATSYRCTSEGYDQMMGTNYIG 463
           H SIQLLINNAGILATS R T+EG DQMM TNY+G
Sbjct: 125 HSSIQLLINNAGILATSCRLTTEGCDQMMATNYMG 159


>ref|XP_002300528.1| predicted protein [Populus trichocarpa] gi|222847786|gb|EEE85333.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score =  149 bits (375), Expect = 3e-34
 Identities = 79/154 (51%), Positives = 99/154 (64%)
 Frame = +2

Query: 2   LSYVRLIAYSLFARDSKCYARCYPTNEDITKSSVVRKPICVIXXXXXXXXXXXXXXXXRN 181
           +SY +L    +F +    Y RC P           +KPICVI                + 
Sbjct: 11  MSYFQLFWQRVFTKKPNAYPRCPPQRIG------TKKPICVITGATSGIGAAAAYDLSKE 64

Query: 182 GFYVVLAGRSSHLLSKIISEIKEQNHAADLKAFHLDISSFGSILKFKTALQQWLLDADLH 361
           GFYVVL GRSS LLSK+I  I ++N  A ++AF +D+SSF SILKFK +L++WLLD+D+H
Sbjct: 65  GFYVVLVGRSSQLLSKMIEWIHKKNKDACVEAFEVDLSSFQSILKFKDSLEKWLLDSDMH 124

Query: 362 CSIQLLINNAGILATSYRCTSEGYDQMMGTNYIG 463
            S+QLLINNAGILA S+R T EGYDQMMGTNYIG
Sbjct: 125 VSVQLLINNAGILAASHRLTEEGYDQMMGTNYIG 158


>ref|XP_002871074.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297316911|gb|EFH47333.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 357

 Score =  147 bits (372), Expect = 7e-34
 Identities = 78/153 (50%), Positives = 99/153 (64%)
 Frame = +2

Query: 5   SYVRLIAYSLFARDSKCYARCYPTNEDITKSSVVRKPICVIXXXXXXXXXXXXXXXXRNG 184
           SY +L+  S+F   S        ++   +KS+    PICVI                R G
Sbjct: 27  SYFQLLKKSIFGSKS--------SSSSCSKSNHSHTPICVITGATSGLGKATAFALSRKG 78

Query: 185 FYVVLAGRSSHLLSKIISEIKEQNHAADLKAFHLDISSFGSILKFKTALQQWLLDADLHC 364
           FYVVL GRSSHLLSK +S+IK QN  A LKAF +DISSF S+ KF+ +L+QWL ++DLH 
Sbjct: 79  FYVVLVGRSSHLLSKTLSDIKRQNENAQLKAFEVDISSFQSVFKFRNSLEQWLFESDLHS 138

Query: 365 SIQLLINNAGILATSYRCTSEGYDQMMGTNYIG 463
           S+QLL+NNAGILATS R T EG+D+MM TNY+G
Sbjct: 139 SVQLLVNNAGILATSCRPTVEGFDRMMATNYVG 171


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