BLASTX nr result

ID: Bupleurum21_contig00024838 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024838
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
tpg|DAA42422.1| TPA: putative DEAD-box ATP-dependent RNA helicas...    86   4e-15
tpg|DAA42421.1| TPA: putative DEAD-box ATP-dependent RNA helicas...    86   4e-15
ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putativ...    85   5e-15
ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    83   2e-14

>ref|XP_002324002.1| predicted protein [Populus trichocarpa] gi|222867004|gb|EEF04135.1|
           predicted protein [Populus trichocarpa]
          Length = 726

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +3

Query: 57  FSEPTPIHAQSWFIAFQSW*IVAIAKIGSGKTLGYLIPAFRHLMRCPNNPQLGPTAQI 230
           FS PTPI AQSW +A QS  IVA+AK GSGKTLGYLIP F HL RC N+PQLGPT  +
Sbjct: 174 FSSPTPIQAQSWPVALQSRDIVAVAKTGSGKTLGYLIPGFIHLKRCRNDPQLGPTVLV 231


>tpg|DAA42422.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
           [Zea mays]
          Length = 1353

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +3

Query: 57  FSEPTPIHAQSWFIAFQSW*IVAIAKIGSGKTLGYLIPAFRHLMRCPNNPQLGPTAQI 230
           FS PTPI AQ+W +A Q+  IVAIAK GSGKTLGYLIPAF HL RC NNP LGPT  +
Sbjct: 620 FSNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRCHNNPMLGPTVLV 677


>tpg|DAA42421.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
           [Zea mays]
          Length = 1298

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/58 (70%), Positives = 45/58 (77%)
 Frame = +3

Query: 57  FSEPTPIHAQSWFIAFQSW*IVAIAKIGSGKTLGYLIPAFRHLMRCPNNPQLGPTAQI 230
           FS PTPI AQ+W +A Q+  IVAIAK GSGKTLGYLIPAF HL RC NNP LGPT  +
Sbjct: 620 FSNPTPIQAQTWPVALQNRDIVAIAKTGSGKTLGYLIPAFIHLRRCHNNPMLGPTVLV 677


>ref|XP_002521446.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223539345|gb|EEF40936.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 781

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 42/58 (72%), Positives = 45/58 (77%)
 Frame = +3

Query: 57  FSEPTPIHAQSWFIAFQSW*IVAIAKIGSGKTLGYLIPAFRHLMRCPNNPQLGPTAQI 230
           FS PTPI AQSW IA QS  IVAIAK GSGKTLGYL+P F HL RC N+PQLGPT  +
Sbjct: 183 FSVPTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPGFIHLKRCRNDPQLGPTVLV 240


>ref|XP_003633801.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like isoform 2
           [Vitis vinifera]
          Length = 828

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 41/58 (70%), Positives = 44/58 (75%)
 Frame = +3

Query: 57  FSEPTPIHAQSWFIAFQSW*IVAIAKIGSGKTLGYLIPAFRHLMRCPNNPQLGPTAQI 230
           FS PTPI AQSW +A QS  IVAIAK GSGKTLGYLIP F HL R  NNPQ+GPT  +
Sbjct: 183 FSAPTPIQAQSWPVALQSRDIVAIAKTGSGKTLGYLIPGFIHLKRIRNNPQMGPTVLV 240


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