BLASTX nr result

ID: Bupleurum21_contig00024801 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024801
         (1235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30249.3| unnamed protein product [Vitis vinifera]              132   1e-28
ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251...   122   2e-25
ref|XP_002528590.1| conserved hypothetical protein [Ricinus comm...    88   4e-15
ref|XP_002881447.1| zinc finger (C2H2-type) family protein [Arab...    68   4e-09
ref|XP_003537040.1| PREDICTED: uncharacterized protein LOC100808...    60   1e-06

>emb|CBI30249.3| unnamed protein product [Vitis vinifera]
          Length = 1049

 Score =  132 bits (333), Expect = 1e-28
 Identities = 104/331 (31%), Positives = 152/331 (45%), Gaps = 23/331 (6%)
 Frame = -3

Query: 1233 EQGLDRAWYXXXXXXXXXXXTQRNGSDTKLGLPNHLASRSPNSDANLQTAHNFASGNSIG 1054
            EQG D+ WY           +QRNG D K G PN+ A RS N+DA+LQ   +  + ++ G
Sbjct: 405  EQGHDKPWYKAGGRVVETFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSG 464

Query: 1053 RGKSWKNSEEEEYMWDDMNSKSSNDGFNLKSKRDPRLMDNAVSLDTQSSLLKSQYLHE-- 880
              +SWKNSEEEEYMWDDMNSK +       SK+D    D++  LD ++ L K Q +++  
Sbjct: 465  MSRSWKNSEEEEYMWDDMNSKMTEHSAANHSKKDRWTPDDSEKLDFENQLQKPQSIYDVG 524

Query: 879  -SVEREALGASLLSEQRKQIAVG-------------KCDPSTGHHTARWTVNHSSDQTSS 742
             SV+RE    S+ SEQR+Q A G               D      T+   + HS    + 
Sbjct: 525  SSVDRETSTDSMSSEQREQGAFGHRMSSLWPLQEPHSTDGLKHSGTSTLILGHSEGYPTQ 584

Query: 741  GHINSYPATLSRLSTGSNSMVRTSFPNNLSGXXXXXXXXXXXXXXPHLNGRTKSSGISDV 562
              +++ P  + +   G    ++   P+NL                     ++ S  +  V
Sbjct: 585  FTLDALPKLIQKAQLGD---LQKLLPHNL---------------------QSLSPAVPSV 620

Query: 561  EM--HSQFS---QNPPMPIVHRGSAHNLQPLDSQSF--PCTNSSFQQRHTGLHASQIPGH 403
             +  H+ FS   Q  P+     G A       +  F  P T  +    H+   A++  G 
Sbjct: 621  PIRHHAPFSPQLQPDPLQPEPSGQAQKTSLPQTSIFEAPSTIENPVLEHSNYPAAESTGK 680

Query: 402  SSVSPSFAAVMESDILGENSVNGSIPKDNSQ 310
             S S   AAVM+S IL  +SV+GSIPK + Q
Sbjct: 681  LSTSNLLAAVMKSGILSNSSVSGSIPKTSFQ 711


>ref|XP_002277320.2| PREDICTED: uncharacterized protein LOC100251089 [Vitis vinifera]
          Length = 801

 Score =  122 bits (305), Expect = 2e-25
 Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 8/195 (4%)
 Frame = -3

Query: 1233 EQGLDRAWYXXXXXXXXXXXTQRNGSDTKLGLPNHLASRSPNSDANLQTAHNFASGNSIG 1054
            EQG D+ WY           +QRNG D K G PN+ A RS N+DA+LQ   +  + ++ G
Sbjct: 326  EQGHDKPWYKAGGRVVETFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSG 385

Query: 1053 RGKSWKNSEEEEYMWDDMNSKSSNDGFNLKSKRDPRLMDNAVSLDTQSSLLKSQYLHE-- 880
              +SWKNSEEEEYMWDDMNSK +       SK+D    D++  LD ++ L K Q +++  
Sbjct: 386  MSRSWKNSEEEEYMWDDMNSKMTEHSAANHSKKDRWTPDDSEKLDFENQLQKPQSIYDVG 445

Query: 879  -SVEREALGASLLSEQRKQIAVG----KCDPSTGHHTARWTVNHSSDQTSSGHINSYPAT 715
             SV+RE    S+ SEQR+Q A G       P    H+     +  +     GH   YP T
Sbjct: 446  SSVDRETSTDSMSSEQREQGAFGHRMSSLWPLQEPHSTDGLKHSGTSTLILGHSEGYP-T 504

Query: 714  LSRLST-GSNSMVRT 673
            +S LST  S+S+ RT
Sbjct: 505  VSGLSTSASSSLART 519


>ref|XP_002528590.1| conserved hypothetical protein [Ricinus communis]
            gi|223531986|gb|EEF33798.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1123

 Score = 88.2 bits (217), Expect = 4e-15
 Identities = 61/190 (32%), Positives = 91/190 (47%), Gaps = 9/190 (4%)
 Frame = -3

Query: 1230 QGLDRAWYXXXXXXXXXXXTQRNGSDTKLGLPNHLASRSPNSDANLQTAHNFASGNSIGR 1051
            +G ++ WY            Q+NG   K G PN+  S+  N D +LQ   + AS ++   
Sbjct: 336  EGHEKPWYGAGNSATETISGQKNGFTVKHGFPNYSTSKPVNVDLHLQRTQSNASKSTTAV 395

Query: 1050 GKSWKNSEEEEYMWDDMNSKSSNDGFNLK--SKRDPRLMDNAVSLDTQSSLLKSQYLHES 877
              SWKNSEEEE+MWD  +  S +D  NL   S++D    D +  L+ ++   K Q   E 
Sbjct: 396  SASWKNSEEEEFMWDMHSRLSDHDAANLSITSRKDRWTPDGSEKLEFENQFRKPQNALEV 455

Query: 876  V---EREALGASLLSEQRKQIAVGKCDPSTGH----HTARWTVNHSSDQTSSGHINSYPA 718
            +   ERE    S  +EQR+QI++G    S       H     +   S  +++G  + Y A
Sbjct: 456  MSRFERETSSDSQSTEQREQISLGHRLSSPWRLKESHPTDGLLIPGSSGSNTGQTDGYSA 515

Query: 717  TLSRLSTGSN 688
            TL  LS  S+
Sbjct: 516  TLGGLSASSS 525


>ref|XP_002881447.1| zinc finger (C2H2-type) family protein [Arabidopsis lyrata subsp.
            lyrata] gi|297327286|gb|EFH57706.1| zinc finger
            (C2H2-type) family protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 843

 Score = 68.2 bits (165), Expect = 4e-09
 Identities = 85/335 (25%), Positives = 130/335 (38%), Gaps = 27/335 (8%)
 Frame = -3

Query: 1233 EQGLDRAWYXXXXXXXXXXXTQRNGSDTKLGLPNHLASRSPNSDANLQTAHNFASGNSIG 1054
            + G ++ WY            QR+G  TK    N+  +R  N +++           +IG
Sbjct: 211  DDGCEKQWYGAMSRSPDLISDQRDGLHTKSRTSNYAMARLANLESS-------GPSRNIG 263

Query: 1053 RG-KSWKNSEEEEYMWDDMNSKSSNDGFNLKSKRDPRLMDNAVSLDTQSSLLKSQYLHES 877
                SWKNSEEEE+MWD  +  S  D   +  K +    D +  L+T++  LK      S
Sbjct: 264  APCDSWKNSEEEEFMWDMHSRLSETDVATINPKNELHAPDESERLETENHHLKRPRF--S 321

Query: 876  VEREALGASLLSEQRKQIAVGKCDPST-GHHTARWTVNHSSDQTSSGHINSYPATLSRLS 700
                    +  SEQ+        DPS  GH T+     H S+  SS +  S   T +R  
Sbjct: 322  ALDPRFDPANSSEQQ--------DPSIFGHWTSSPRSLHDSEVFSSTNATS---TAARKG 370

Query: 699  TGSNSMVRTS--FPNNLSGXXXXXXXXXXXXXXPHLNGRTKSSGISDVEMHSQFSQNPPM 526
                  V +S   P++ SG                L+  T    ++  ++    S     
Sbjct: 371  IQPQPRVASSGILPSSGSGSDRQSP----------LHDSTSKQNVTKQDVRRAHSLPQRD 420

Query: 525  PIVHRGSAHNLQPLDSQSFPCTNSSFQ----------------------QRHTGLH-ASQ 415
            P   R  A N+   DS   P ++S F+                      +   GL  AS+
Sbjct: 421  PRASRFPAKNVPRDDSVRIPSSSSQFKNTNMRELPDASQVEIFDSKLAAENAPGLTIASE 480

Query: 414  IPGHSSVSPSFAAVMESDILGENSVNGSIPKDNSQ 310
              G  ++S    AVM+S IL  NS +G+I ++ SQ
Sbjct: 481  ATGQPNMSDLLEAVMKSGILSNNSTHGAIKEEISQ 515


>ref|XP_003537040.1| PREDICTED: uncharacterized protein LOC100808395 [Glycine max]
          Length = 610

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 69/283 (24%), Positives = 110/283 (38%), Gaps = 21/283 (7%)
 Frame = -3

Query: 1170 QRNGSDTKLGLPNHLASRSPNSDANLQTAHNFASGNSIGRGKSWKNSEEEEYMWDDMNSK 991
            Q NG   K    N  A +S   D + Q   N +S  +     SWKNSEEEEY WD+MNS 
Sbjct: 4    QGNGLGLKYSFLNTEAPKSMILDVHHQPTQNISSTRTSVISASWKNSEEEEYTWDEMNSG 63

Query: 990  SSNDGFNLKSKRDPRLMD-NAVSLDTQSSLLKSQYLHESVEREALGASLLSEQRKQIAVG 814
             +  G +  S         +  +L+ +  L        +V+RE +     + ++KQ+   
Sbjct: 64   LTVHGASTVSNLSKNSWTADDENLEAEDCLEIRNPFRANVDRE-MSIESQATEKKQL--- 119

Query: 813  KCDPSTGHH-TARWTVNHSSD----QTSSGHINSYPATLSRLSTGSNS----MVRTSFPN 661
               PS+ HH +  W +            +GH + + +T   +   +NS    MV   F +
Sbjct: 120  ---PSSHHHPSLSWQLQEQQSIDELNRKAGHSDRFVSTHGAIPANANSSAARMVNQPFLS 176

Query: 660  NLSGXXXXXXXXXXXXXXPHLNGRTKSSGISDVEMHSQFSQNPPMPIV----------HR 511
            N +                H  G    SG S ++   Q S +PP P              
Sbjct: 177  NAT------IGLPGIAGQFHSLGAENPSGQSPLQ---QRSPSPPGPFSSTTFQARHQHQL 227

Query: 510  GSAHNLQPLDSQSFPCTNSSF-QQRHTGLHASQIPGHSSVSPS 385
            GS+HN   + ++  P +     ++  + L    +P    V PS
Sbjct: 228  GSSHNEVTVKTEKPPMSEVPLARETKSNLDTGNLPSRLGVRPS 270


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