BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024786
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...    98   8e-19
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...    94   2e-17
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...    83   2e-14
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...    79   3e-13
ref|NP_196692.1| pentatricopeptide repeat-containing protein [Ar...    78   9e-13

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 45/81 (55%), Positives = 62/81 (76%)
 Frame = -3

Query: 326 QYLTYQKMYDQLQKEGMADMSKKLSDLMASVPHSKNLPNTYIGDSSLSSERHTSAIQKAE 147
           QYLT+++M + L+K G+ +M++KL D+MASVPHS  LPNTY GD   S  R TS IQ+AE
Sbjct: 495 QYLTFERMNNALRKRGLTEMARKLCDMMASVPHSSKLPNTYSGDGDASRARKTSIIQRAE 554

Query: 146 VMSKILKTSKNPKDIMKQRSS 84
            MS ILKT  +P++++K+RSS
Sbjct: 555 AMSDILKTCNDPRELVKRRSS 575


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/82 (53%), Positives = 64/82 (78%), Gaps = 1/82 (1%)
 Frame = -3

Query: 326 QYLTYQKMYDQLQKEGMADMSKKLSDLMASVPHSKNLPNTY-IGDSSLSSERHTSAIQKA 150
           QYLT+Q++ D+L+K GM + ++KLSD+M+SVPHS NLPNTY +   +L   R +S +QKA
Sbjct: 474 QYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTYSVEGDALRRARRSSILQKA 533

Query: 149 EVMSKILKTSKNPKDIMKQRSS 84
           E MSKILKT  +P++++K +SS
Sbjct: 534 EAMSKILKTCNDPRELVKLKSS 555


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/82 (48%), Positives = 60/82 (73%), Gaps = 1/82 (1%)
 Frame = -3

Query: 326 QYLTYQKMYDQLQKEGMADMSKKLSDLMASVPHSKNLPNTYIGDSSLSSE-RHTSAIQKA 150
           QYLT+ ++ D+ +K+G+ +++++L  LM+SV HSKNLPNTY  D   S   R  S +QKA
Sbjct: 505 QYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNLPNTYNVDRDASRHARRKSILQKA 564

Query: 149 EVMSKILKTSKNPKDIMKQRSS 84
            VMS+ILKT  +P++++K RSS
Sbjct: 565 GVMSEILKTCNDPRELVKHRSS 586


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 35/80 (43%), Positives = 57/80 (71%)
 Frame = -3

Query: 326 QYLTYQKMYDQLQKEGMADMSKKLSDLMASVPHSKNLPNTYIGDSSLSSERHTSAIQKAE 147
           QYLT+ +++D+  K G+  M+ KL ++M+SVPHS+ LP+TY         R TS ++KAE
Sbjct: 511 QYLTFCRLHDEFMKRGLTKMASKLQEMMSSVPHSEKLPDTYNQTPDSIRARRTSIMRKAE 570

Query: 146 VMSKILKTSKNPKDIMKQRS 87
            MS++LK  K+P++++K+RS
Sbjct: 571 AMSEMLKVCKDPRELVKRRS 590


>ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g11310, mitochondrial; Flags: Precursor
           gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis
           thaliana] gi|110738090|dbj|BAF00978.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332004275|gb|AED91658.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 37/83 (44%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -3

Query: 326 QYLTYQKMYDQLQKEGMADMSKKLSDLMASVPHSKNLPNTY--IGDSSLSSERHTSAIQK 153
           QY+T++ + + L+ +GM+DM+K+LS LM+S+PHSK LPNTY    D+    +R  S + +
Sbjct: 494 QYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSKKLPNTYREAVDAPPDKDRRKSILHR 553

Query: 152 AEVMSKILKTSKNPKDIMKQRSS 84
           AE MS +LK  +NP+ ++K R S
Sbjct: 554 AEAMSDVLKGCRNPRKLVKMRGS 576