BLASTX nr result

ID: Bupleurum21_contig00024765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024765
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264981.1| PREDICTED: uncharacterized protein LOC100246...   152   9e-35
ref|XP_002321243.1| predicted protein [Populus trichocarpa] gi|2...   145   1e-32
ref|XP_002521127.1| zinc finger protein, putative [Ricinus commu...   138   1e-30
ref|XP_002301764.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_003532303.1| PREDICTED: zinc finger protein 7-like [Glyci...   129   7e-28

>ref|XP_002264981.1| PREDICTED: uncharacterized protein LOC100246047 [Vitis vinifera]
           gi|297744296|emb|CBI37266.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  152 bits (384), Expect = 9e-35
 Identities = 90/184 (48%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
 Frame = +3

Query: 204 NADDSTTPGAARSFPCLFCSRKFHSSQALGGHQNAHXXXXXXXXXXXXXSSNCNLNSTFQ 383
           N D +    A R FPCLFCSRKFHSSQALGGHQNAH             +S   LNS   
Sbjct: 3   NEDKTIEDSATRVFPCLFCSRKFHSSQALGGHQNAH-KKERTAARKAKRASEYTLNSFSA 61

Query: 384 T--PPLFFSPSHHQFGLLNPSLYLTAHAANLC-ALPGPPFSDRFGSTGGAPRFDNLVFYR 554
           T  PPL F+PSHH  G+ NPS+Y+TAHAA      P P FS+RFG++ GAPR +N+VFY 
Sbjct: 62  TPPPPLVFAPSHH-LGIFNPSMYITAHAATFANHFPTPQFSERFGAS-GAPRLENVVFYG 119

Query: 555 GNYMNNSAYQFE-EDDQQSFLNWK----RNGFIKEISSQNKNVSTSGNNDSEGKDQKLDL 719
           G   + + YQ +  DD+QS +NW+    RN  +   SSQ+      G +    KD+KLDL
Sbjct: 120 GGSCSGNVYQHQLGDDEQSLVNWQRSALRNNAMNGGSSQHIKNQKLGGDIERDKDKKLDL 179

Query: 720 SLHL 731
           SLHL
Sbjct: 180 SLHL 183


>ref|XP_002321243.1| predicted protein [Populus trichocarpa] gi|222862016|gb|EEE99558.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  145 bits (365), Expect = 1e-32
 Identities = 99/200 (49%), Positives = 118/200 (59%), Gaps = 12/200 (6%)
 Frame = +3

Query: 168 MDAENIHCQSPNNADDSTTPGAARSFPCLFCSRKFHSSQALGGHQNAHXXXXXXXXXXXX 347
           M+ E   C  P NA + TT   AR FPCLFCSRKF+SSQALGGHQNAH            
Sbjct: 1   MEPEEEVC--PINAGEDTT---ARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKAKR 55

Query: 348 XSSNCNLNSTFQTP--PLFFSPSHHQFGLLNPSLYLTAHAANLCALPGPPFSDRFGSTGG 521
            S        F  P  P+ F+PSHH  GLL+PSLY TAHAA L   P   FSDRFGS   
Sbjct: 56  AS------EIFPPPTFPIMFAPSHH-LGLLHPSLYRTAHAATLPCPPTHQFSDRFGSNNA 108

Query: 522 APRFDNLVFYRGNYMNNSAY-QFEEDDQQSFLNWKR----NGFIKEISSQ-----NKNVS 671
           A RFDN++FY      +S Y Q++++D+QSFLNW+R    NGF +  S+Q     N N +
Sbjct: 109 A-RFDNVLFY-----GSSRYRQYDQEDEQSFLNWQRSVRFNGFNEGGSNQYLSRVNGNPN 162

Query: 672 TSGNNDSEGKDQKLDLSLHL 731
               ND   KDQKLDL+LHL
Sbjct: 163 MGIRND---KDQKLDLTLHL 179


>ref|XP_002521127.1| zinc finger protein, putative [Ricinus communis]
           gi|223539696|gb|EEF41278.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 199

 Score =  138 bits (348), Expect = 1e-30
 Identities = 94/211 (44%), Positives = 116/211 (54%), Gaps = 23/211 (10%)
 Frame = +3

Query: 168 MDAENIHCQSPNNADDSTTPGAARSFPCLFCSRKFHSSQALGGHQNAHXXXXXXXXXXXX 347
           M+ E    Q+    +D+      R FPCLFCSRKF+SSQALGGHQNAH            
Sbjct: 1   METEQKVSQASTAEEDTRN---TRVFPCLFCSRKFYSSQALGGHQNAH-------KKERN 50

Query: 348 XSSNCNLNSTFQTP---PLFFSPSHHQ--FGLLNPSLYLTAHAANLCALPGPPFSDRFGS 512
            +      S F  P   P+ F+PSHH    GLL+PS+Y+TAHAA+L   P   FSD FGS
Sbjct: 51  AARKAKRASEFAPPPALPMVFAPSHHHHPLGLLHPSMYITAHAASLHCYPSHQFSDTFGS 110

Query: 513 TGGAPRFDNL----VFYRGNYMNNSAYQFEEDDQQSFLNWKR----NGFIKEISSQN--- 659
             GAPRFDN     + Y GN  ++  +Q EE D++SFLNW+R    NGF    S+Q    
Sbjct: 111 -NGAPRFDNNNNNGIIYGGNCSSHRYHQCEE-DEKSFLNWQRSIRCNGFYGSGSNQQPVA 168

Query: 660 KNVSTSGN-------NDSEGKDQKLDLSLHL 731
            N   S N       N ++ KD KLDLSLHL
Sbjct: 169 TNTVVSDNAHHHNVGNKNDSKDPKLDLSLHL 199


>ref|XP_002301764.1| predicted protein [Populus trichocarpa] gi|222843490|gb|EEE81037.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  135 bits (340), Expect = 1e-29
 Identities = 92/193 (47%), Positives = 113/193 (58%), Gaps = 14/193 (7%)
 Frame = +3

Query: 195 SPNNADDSTTPGAARSFPCLFCSRKFHSSQALGGHQNAHXXXXXXXXXXXXXSSNCNLNS 374
           SP +A++ T   AAR FPCLFCSRKF+SSQALGGHQNAH             S      S
Sbjct: 8   SPIHAEEDT---AARVFPCLFCSRKFYSSQALGGHQNAHKKERNAARKTRRVSEYA--PS 62

Query: 375 TFQTPPLFFSPSHHQFGLLNPSLYL-TAHAANL-CALPGPPFSDRFGSTGGAPRFDNLVF 548
              T P+ FSPSHH  GLL+PS+Y  TAHAANL C      FSDR GS+G A RFD+ V 
Sbjct: 63  PPPTFPVIFSPSHH-LGLLHPSMYTSTAHAANLHCHPTHDQFSDRLGSSGAA-RFDSGVL 120

Query: 549 YRGNYMNNSAY---QFEEDDQQSFLNWKRN---------GFIKEISSQNKNVSTSGNNDS 692
           + G   ++  Y   Q++++D+QS LNW+R+         G    +S  N N +    ND 
Sbjct: 121 FYGGSCSSDRYDHHQYDQEDEQSLLNWQRSIRCPGFNGGGPNHHLSMANDNHNMEIRND- 179

Query: 693 EGKDQKLDLSLHL 731
             KDQKLDLSLHL
Sbjct: 180 --KDQKLDLSLHL 190


>ref|XP_003532303.1| PREDICTED: zinc finger protein 7-like [Glycine max]
          Length = 176

 Score =  129 bits (325), Expect = 7e-28
 Identities = 77/174 (44%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
 Frame = +3

Query: 213 DSTTPGAARSFPCLFCSRKFHSSQALGGHQNAHXXXXXXXXXXXXXSSNCNLNSTFQTP- 389
           +S    ++R FPCLFCSRKF+SSQALGGHQNAH             S +  ++     P 
Sbjct: 12  ESQREDSSRVFPCLFCSRKFYSSQALGGHQNAHKKERTAARKAKKASEHSCVSFPSPLPT 71

Query: 390 PLFFSPSHHQFGLLNPSLYLTAHAANLCALPGPPFSDRFGSTGGAPRFDNLVFYRGNYMN 569
           P+ F+P+H   G+LNP++++TAHAA L  LP    S++FGS  GAPRF N +FYRG+  N
Sbjct: 72  PMVFAPTH--LGILNPAMFITAHAARLPHLPSHQISEQFGS-NGAPRFGNALFYRGSSKN 128

Query: 570 NSAYQFEEDDQQSFLNWKRNGFIKEISSQNKNVSTSGNNDSEGKDQKLDLSLHL 731
               +  +D + S   W       ++ S N+N+    NN +E KDQKLDLSLHL
Sbjct: 129 ----RLHDDGKSSTFCWGDTSQHMQLLSNNQNLGI-WNNGTE-KDQKLDLSLHL 176


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