BLASTX nr result

ID: Bupleurum21_contig00024751 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024751
         (785 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26973.3| unnamed protein product [Vitis vinifera]              219   4e-55
gb|AEX00368.1| IAA32 [Solanum lycopersicum]                           214   2e-53
ref|NP_001234700.1| AUX/IAA 10 [Solanum lycopersicum] gi|3389696...   211   1e-52
ref|XP_002314837.1| predicted protein [Populus trichocarpa] gi|2...   191   1e-46
ref|XP_002526284.1| Auxin-responsive protein IAA32, putative [Ri...   186   5e-45

>emb|CBI26973.3| unnamed protein product [Vitis vinifera]
          Length = 197

 Score =  219 bits (559), Expect = 4e-55
 Identities = 111/187 (59%), Positives = 138/187 (73%), Gaps = 7/187 (3%)
 Frame = +3

Query: 60  MDSNTSGYFMSQGSLSSVYYHQGKEYGNMIDLGLSLKTLQPQAYHPSGN-------DDYG 218
           MDS++ G+  S  SL  VYY Q KE   +IDLGLSL+TLQPQ YHP+G+         YG
Sbjct: 1   MDSHSQGFLWSPPSLHPVYY-QTKEDDGIIDLGLSLRTLQPQVYHPTGHMGSLEGYGAYG 59

Query: 219 DLLDWHQLHPQMRSSNNEFTRNITYDSAEDTDVVQSKSRCAYVKVNMDGVVVGRKVCLFD 398
           + +DW QL  Q R+SN+   + I  D  E+T+ VQSK R AYVKVNMDGVV+GRK+C+ D
Sbjct: 60  EPVDWPQLEAQSRNSNSGCPKVIPEDCEEETEGVQSKERWAYVKVNMDGVVIGRKICVLD 119

Query: 399 HSDYSSLAMQLEDIFGRQSVSGLRLFHAASEFCLFYKDRDDQWRTVGDVPWRKFIDCVKR 578
            + YSSLA+QLED+FGR S+SGLRLF   SEF LFYKDR++ WRTVGDVPW++F+D +KR
Sbjct: 120 LAGYSSLALQLEDMFGRDSLSGLRLFQRESEFALFYKDREENWRTVGDVPWKEFVDSIKR 179

Query: 579 LRIVHKN 599
           LRIV KN
Sbjct: 180 LRIVRKN 186


>gb|AEX00368.1| IAA32 [Solanum lycopersicum]
          Length = 188

 Score =  214 bits (545), Expect = 2e-53
 Identities = 107/184 (58%), Positives = 139/184 (75%), Gaps = 4/184 (2%)
 Frame = +3

Query: 60  MDSNTSGYFMSQGS-LSSVYYH-QGKEYGNMIDLGLSLKTLQPQAYHPSGNDDYGDLLDW 233
           MDSN+S Y ++  + L SVYY    KE GN IDLGLSL+ LQP+AY+PS +  Y +L+DW
Sbjct: 1   MDSNSSEYLLNHATTLPSVYYQTNNKENGNFIDLGLSLRALQPEAYYPSTHGGYDELIDW 60

Query: 234 HQLHPQM-RSSNNEFTRNIT-YDSAEDTDVVQSKSRCAYVKVNMDGVVVGRKVCLFDHSD 407
             LHPQ+ ++S +E+  N   YD  ++++ +QSK R  YVKVNMDGV+VGRK+CL +HS 
Sbjct: 61  QHLHPQLSKNSRSEYPTNFNNYD--DESEGIQSKERWEYVKVNMDGVIVGRKICLLEHSS 118

Query: 408 YSSLAMQLEDIFGRQSVSGLRLFHAASEFCLFYKDRDDQWRTVGDVPWRKFIDCVKRLRI 587
           YSS+A QLED+FG+Q++ GLRLF   SEF LFYKDR+DQWR VGDVPW +F D VKRLRI
Sbjct: 119 YSSIATQLEDMFGKQNMDGLRLFQDGSEFSLFYKDRNDQWRIVGDVPWNEFADRVKRLRI 178

Query: 588 VHKN 599
           + K+
Sbjct: 179 MRKD 182


>ref|NP_001234700.1| AUX/IAA 10 [Solanum lycopersicum] gi|338969607|gb|AEJ33648.1|
           AUX/IAA 16 [Solanum lycopersicum]
          Length = 188

 Score =  211 bits (538), Expect = 1e-52
 Identities = 106/184 (57%), Positives = 138/184 (75%), Gaps = 4/184 (2%)
 Frame = +3

Query: 60  MDSNTSGYFMSQGS-LSSVYYH-QGKEYGNMIDLGLSLKTLQPQAYHPSGNDDYGDLLDW 233
           MDSN+S Y ++  + L SVYY    K  GN IDLGLSL+ LQP+AY+PS +  Y +L+DW
Sbjct: 1   MDSNSSEYLLNHATTLPSVYYQTNNKVNGNFIDLGLSLRALQPEAYYPSTHGGYDELIDW 60

Query: 234 HQLHPQM-RSSNNEFTRNIT-YDSAEDTDVVQSKSRCAYVKVNMDGVVVGRKVCLFDHSD 407
             LHPQ+ ++S +E+  N   YD  ++++ +QSK R  YVKVNMDGV+VGRK+CL +HS 
Sbjct: 61  QHLHPQLSKNSRSEYPTNFNNYD--DESEGIQSKERWEYVKVNMDGVIVGRKICLLEHSS 118

Query: 408 YSSLAMQLEDIFGRQSVSGLRLFHAASEFCLFYKDRDDQWRTVGDVPWRKFIDCVKRLRI 587
           YSS+A QLED+FG+Q++ GLRLF   SEF LFYKDR+DQWR VGDVPW +F D VKRLRI
Sbjct: 119 YSSIATQLEDMFGKQNMDGLRLFQDGSEFSLFYKDRNDQWRIVGDVPWNEFADRVKRLRI 178

Query: 588 VHKN 599
           + K+
Sbjct: 179 MRKD 182


>ref|XP_002314837.1| predicted protein [Populus trichocarpa] gi|222863877|gb|EEF01008.1|
           predicted protein [Populus trichocarpa]
          Length = 160

 Score =  191 bits (486), Expect = 1e-46
 Identities = 99/180 (55%), Positives = 123/180 (68%)
 Frame = +3

Query: 60  MDSNTSGYFMSQGSLSSVYYHQGKEYGNMIDLGLSLKTLQPQAYHPSGNDDYGDLLDWHQ 239
           MDSN SG+ ++  +L S YY Q +E   +IDLGLSL+TL+P+AYHPSG          H+
Sbjct: 1   MDSNASGFLLNPPALHSTYY-QPREDDGIIDLGLSLRTLKPEAYHPSG----------HR 49

Query: 240 LHPQMRSSNNEFTRNITYDSAEDTDVVQSKSRCAYVKVNMDGVVVGRKVCLFDHSDYSSL 419
           +                       + VQSK R AYVKVNMDGV+VGRK+C+ DH  YSSL
Sbjct: 50  MPL--------------------AEGVQSKDRWAYVKVNMDGVIVGRKICMLDHGGYSSL 89

Query: 420 AMQLEDIFGRQSVSGLRLFHAASEFCLFYKDRDDQWRTVGDVPWRKFIDCVKRLRIVHKN 599
           A+QLED+FGRQS SGLRLF A SEFCLFYKDR++ WRTVGDVPW++F++ VKRLRI  K+
Sbjct: 90  ALQLEDMFGRQSASGLRLFQAGSEFCLFYKDREENWRTVGDVPWKEFVESVKRLRIARKS 149


>ref|XP_002526284.1| Auxin-responsive protein IAA32, putative [Ricinus communis]
           gi|223534365|gb|EEF36073.1| Auxin-responsive protein
           IAA32, putative [Ricinus communis]
          Length = 192

 Score =  186 bits (472), Expect = 5e-45
 Identities = 98/182 (53%), Positives = 127/182 (69%), Gaps = 6/182 (3%)
 Frame = +3

Query: 60  MDSNTSGYFMSQGSLSSVYYHQGKEYGNMIDLGLSLKTLQPQAYHPSGN----DDYGDLL 227
           MDS+ S +F++  +L SVYY   KE  ++IDLGLSL+T QP AYHPSG+    + Y +L+
Sbjct: 1   MDSSASSFFLNPSALQSVYY-PAKEDEDIIDLGLSLRTFQPDAYHPSGHYIGQEGYDELM 59

Query: 228 DW-HQ-LHPQMRSSNNEFTRNITYDSAEDTDVVQSKSRCAYVKVNMDGVVVGRKVCLFDH 401
            W HQ  HP +R SN+ + RN   +  ED + VQSK   AYVKVNMDGVVVGRK+C+ DH
Sbjct: 60  AWPHQGNHPSLRHSNSGYQRNTQQEYDEDAEGVQSKESWAYVKVNMDGVVVGRKICILDH 119

Query: 402 SDYSSLAMQLEDIFGRQSVSGLRLFHAASEFCLFYKDRDDQWRTVGDVPWRKFIDCVKRL 581
             YSSLA+QLED+FG Q+ +GLRLF   SEFCLFY+DR+D WRT      +   DC K++
Sbjct: 120 GGYSSLAVQLEDMFGIQTATGLRLFQPGSEFCLFYQDREDNWRTGIYRIRQAAKDCTKKV 179

Query: 582 RI 587
           +I
Sbjct: 180 KI 181


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