BLASTX nr result

ID: Bupleurum21_contig00024749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024749
         (677 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235387.1| CCAAT-binding transcription factor family pr...   129   7e-28
ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, ...   124   2e-26
gb|AFK49650.1| nuclear transcription factor Y subunit A8 [Medica...   117   2e-24
emb|CAM32011.1| YA6 [Petunia x hybrida]                               113   4e-23
emb|CAN73678.1| hypothetical protein VITISV_021401 [Vitis vinifera]   112   7e-23

>ref|NP_001235387.1| CCAAT-binding transcription factor family protein [Glycine max]
           gi|257136301|gb|ACV44452.1| CCAAT-binding transcription
           factor family protein [Glycine max]
          Length = 348

 Score =  129 bits (323), Expect = 7e-28
 Identities = 71/134 (52%), Positives = 89/134 (66%), Gaps = 10/134 (7%)
 Frame = +3

Query: 3   AILRRRQYRAKLEAQKKLIKNRKPYLHESRHLHALKRARGSGGRFLNKKKLEDSK----- 167
           AILRRRQYRAKLEAQ KLIK RKPYLHESRHLHALKRARGSGGRFLN KKL++ K     
Sbjct: 194 AILRRRQYRAKLEAQNKLIKERKPYLHESRHLHALKRARGSGGRFLNAKKLQELKLTSAN 253

Query: 168 ---SISESSQPQTSTRTFKSELLRPPQIYEKNTLSTSWCSEIMTISDHDSIFQQQE--LR 332
               +S  +Q   S    +S++     +  +N  ST+ CS++++ S+ D +FQQ E   R
Sbjct: 254 RGLDVSGCTQLNLSGNMSESKVQAVENLNYRNGASTTTCSDVISTSNSDDVFQQHESDFR 313

Query: 333 FSAYPSLIGKPWEG 374
              YPS IG+  +G
Sbjct: 314 LCGYPSHIGRNMQG 327


>ref|XP_002521352.1| Nuclear transcription factor Y subunit A-3, putative [Ricinus
           communis] gi|223539430|gb|EEF41020.1| Nuclear
           transcription factor Y subunit A-3, putative [Ricinus
           communis]
          Length = 335

 Score =  124 bits (310), Expect = 2e-26
 Identities = 71/124 (57%), Positives = 85/124 (68%), Gaps = 8/124 (6%)
 Frame = +3

Query: 3   AILRRRQYRAKLEAQKKLIKNRKPYLHESRHLHALKRARGSGGRFLNKKKLEDSKSISES 182
           AILRRR+YRAKLEAQ KLIK RKPYLHESRHLHAL+RARGSGGRFLN KKLEDS     S
Sbjct: 188 AILRRRRYRAKLEAQNKLIKARKPYLHESRHLHALRRARGSGGRFLNAKKLEDSNPTPAS 247

Query: 183 -------SQPQTSTRTFKSELLRPPQIYEKNTLSTSWCSEIMTISDHDSIFQQQ-ELRFS 338
                  +Q   +    +SE+  P     ++  ST+ CS++ + S+ D IFQQQ E +FS
Sbjct: 248 HGLDGAGTQFHLAGNISESEVHHPEN--HRDGASTTSCSDVTSASNSDDIFQQQTEFKFS 305

Query: 339 AYPS 350
            YPS
Sbjct: 306 GYPS 309


>gb|AFK49650.1| nuclear transcription factor Y subunit A8 [Medicago truncatula]
          Length = 300

 Score =  117 bits (293), Expect = 2e-24
 Identities = 66/122 (54%), Positives = 81/122 (66%), Gaps = 6/122 (4%)
 Frame = +3

Query: 3   AILRRRQYRAKLEAQKKLIKNRKPYLHESRHLHALKRARGSGGRFLNKKKLEDSKSISES 182
           AILRRRQYRAKLEAQ KL+KNRKPYLHESRHLHALKRARGSGGRFLN  KL+D       
Sbjct: 158 AILRRRQYRAKLEAQNKLVKNRKPYLHESRHLHALKRARGSGGRFLNTNKLQD-----HG 212

Query: 183 SQPQTSTRTFKSELLRPPQIYE----KNTLSTSWCSEIMTISDHDSIFQQQE--LRFSAY 344
               T+TR   S  +   ++++    ++  ST+ CS++   S+ D +FQQ E   R   Y
Sbjct: 213 FNVSTTTRVNPSGNVPESRVHQVEKYRDGASTTTCSDVTCASNSDDMFQQHESDFRSCGY 272

Query: 345 PS 350
           PS
Sbjct: 273 PS 274


>emb|CAM32011.1| YA6 [Petunia x hybrida]
          Length = 142

 Score =  113 bits (282), Expect = 4e-23
 Identities = 64/117 (54%), Positives = 81/117 (69%), Gaps = 3/117 (2%)
 Frame = +3

Query: 3   AILRRRQYRAKLEAQKKLIKNRKPYLHESRHLHALKRARGSGGRFLNKKKLEDSKS---I 173
           AILRRRQYRAKLEAQ KL K+RKPYLHESRH HAL RARG GGRFLN KKL +SKS   I
Sbjct: 5   AILRRRQYRAKLEAQNKLSKSRKPYLHESRHRHALNRARGPGGRFLNIKKLRESKSPDLI 64

Query: 174 SESSQPQTSTRTFKSELLRPPQIYEKNTLSTSWCSEIMTISDHDSIFQQQELRFSAY 344
            +   P ++     +++L  P +Y+    ST   S I + S+ D+I+ QQ L++SA+
Sbjct: 65  DDQRVPVSNELQLNTKMLE-PDVYQ----STPASSGITSCSNGDAIYHQQSLKYSAF 116


>emb|CAN73678.1| hypothetical protein VITISV_021401 [Vitis vinifera]
          Length = 311

 Score =  112 bits (280), Expect = 7e-23
 Identities = 62/127 (48%), Positives = 80/127 (62%), Gaps = 9/127 (7%)
 Frame = +3

Query: 6   ILRRRQYRAKLEAQKKLIKNRKPYLHESRHLHALKRARGSGGRFLNKKKLEDSKSISESS 185
           I+RRR++RAKLEAQ   +K RKPYLHESRHLHALKR RG+GGRFLN  KL++ K  S S+
Sbjct: 168 IMRRRKHRAKLEAQTNPVKARKPYLHESRHLHALKRPRGAGGRFLNMSKLQEPKPSSPST 227

Query: 186 Q---------PQTSTRTFKSELLRPPQIYEKNTLSTSWCSEIMTISDHDSIFQQQELRFS 338
                     P     T +SE+ +P     +   ST+ CS++ + S+ D +F Q E RFS
Sbjct: 228 DALIAGSAQPPFNGNTTSESEVHQPEN--NREGASTTSCSDVTSGSNSDDVFLQPEFRFS 285

Query: 339 AYPSLIG 359
            YP  IG
Sbjct: 286 TYPPHIG 292


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