BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024748
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]...   365   8e-99
ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group] g...   360   3e-97
gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indi...   360   3e-97
gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. ...   358   2e-96
emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]        358   2e-96

>gb|AAO72413.1| gag-pol polyprotein [Oryza sativa Japonica Group]
            gi|108710383|gb|ABF98178.1| retrotransposon protein,
            putative, unclassified [Oryza sativa Japonica Group]
          Length = 1339

 Score =  365 bits (938), Expect = 8e-99
 Identities = 164/292 (56%), Positives = 216/292 (73%)
 Frame = -1

Query: 1097 LWHKRMGHVNYHALSLMHKNKMVNGMSRIMVSNEVCEGCLMSKQTRKQFPAKSSYSATKA 918
            LWH R+GHVN+HAL L+   +M  G+  +   N++C+ CL++KQ R+ FP  ++Y A   
Sbjct: 447  LWHARLGHVNFHALKLLVDKEMAAGVPAVHHPNQLCQACLVAKQVRQPFPGMANYLAEAP 506

Query: 917  LELIHGDLCGPIQPETASGKRYFFLLVDDFSRYMWVYFLKAKNEALSAFKNFCALVERGP 738
            LEL+H DLCGPI P T +G RYF L+VDDFS +MWV+ +K+K++AL+AF+ F  L E   
Sbjct: 507  LELLHMDLCGPITPSTFTGNRYFMLIVDDFSHWMWVFVIKSKDQALAAFEKFKPLAENTA 566

Query: 737  ERKVRTFRTDRGGEFISNEFEKYCKEKGIDRHYTAPYTPQQNGVVERRNRTVVEMARSCL 558
             R ++T RTDRGGEF+S EF + C   GI+RH T PY+PQQNGVVERRNRTV+ MARS L
Sbjct: 567  GRTIKTLRTDRGGEFLSGEFARVCDAAGIERHLTVPYSPQQNGVVERRNRTVMAMARSLL 626

Query: 557  KEMKLPKIMWGEAVRHSIYLLNRLPTRALTGVTPYEAWNGRKPHIGHIKVFGCVGHMKIP 378
            K M +P  MWGEAVRH+++LLNRLPT+A+   TP+EAW G+KPH+GH++VFGC  H K+ 
Sbjct: 627  KGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTPFEAWTGKKPHLGHLRVFGCTAHAKVT 686

Query: 377  SQHTLKLDDRSKQVVNLGKEPGTKAYRLYDPLTKRVHVSRDVTFEENKSWPW 222
            + H  KLDDRS  VV LG E G+KA+RL+DP  +++ VSRDV F+EN  W W
Sbjct: 687  APHLKKLDDRSNPVVYLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 738


>ref|NP_001060895.1| Os08g0125300 [Oryza sativa Japonica Group]
            gi|113622864|dbj|BAF22809.1| Os08g0125300 [Oryza sativa
            Japonica Group] gi|215701150|dbj|BAG92574.1| unnamed
            protein product [Oryza sativa Japonica Group]
          Length = 1427

 Score =  360 bits (925), Expect = 3e-97
 Identities = 164/296 (55%), Positives = 217/296 (73%)
 Frame = -1

Query: 1109 EMSELWHKRMGHVNYHALSLMHKNKMVNGMSRIMVSNEVCEGCLMSKQTRKQFPAKSSYS 930
            E + LWH R+GHVN+ A+ L+    M  G+  I   N++C+ CL++KQ R+ FPA +++ 
Sbjct: 490  EPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFR 549

Query: 929  ATKALELIHGDLCGPIQPETASGKRYFFLLVDDFSRYMWVYFLKAKNEALSAFKNFCALV 750
            A + LEL+H DLCGPI P T +G RYF L+VDDFSR+MW++ +K K++AL AF  F  L 
Sbjct: 550  AEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLA 609

Query: 749  ERGPERKVRTFRTDRGGEFISNEFEKYCKEKGIDRHYTAPYTPQQNGVVERRNRTVVEMA 570
            E    R+++T R+DRGGEF+S EF + C++ GI RH TAPY+PQQNGVVERRNR+V+ MA
Sbjct: 610  ENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMAMA 669

Query: 569  RSCLKEMKLPKIMWGEAVRHSIYLLNRLPTRALTGVTPYEAWNGRKPHIGHIKVFGCVGH 390
            RS +K M +P   WGEAVRH++YLLNRLPT+A+   TP+EAW GRKP +GH++VFGC+ H
Sbjct: 670  RSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCIAH 729

Query: 389  MKIPSQHTLKLDDRSKQVVNLGKEPGTKAYRLYDPLTKRVHVSRDVTFEENKSWPW 222
             KI + +  KLDDRS   V LG E G+KA+RL+DP   R+HVSRDV FEEN  W W
Sbjct: 730  AKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQW 785


>gb|EEC84282.1| hypothetical protein OsI_30754 [Oryza sativa Indica Group]
          Length = 1427

 Score =  360 bits (925), Expect = 3e-97
 Identities = 164/296 (55%), Positives = 217/296 (73%)
 Frame = -1

Query: 1109 EMSELWHKRMGHVNYHALSLMHKNKMVNGMSRIMVSNEVCEGCLMSKQTRKQFPAKSSYS 930
            E + LWH R+GHVN+ A+ L+    M  G+  I   N++C+ CL++KQ R+ FPA +++ 
Sbjct: 490  EPAWLWHARLGHVNFQAMKLLADKGMAGGIPAITHPNQLCQACLVAKQIRQPFPATANFR 549

Query: 929  ATKALELIHGDLCGPIQPETASGKRYFFLLVDDFSRYMWVYFLKAKNEALSAFKNFCALV 750
            A + LEL+H DLCGPI P T +G RYF L+VDDFSR+MW++ +K K++AL AF  F  L 
Sbjct: 550  AEEPLELLHIDLCGPITPTTMAGNRYFMLIVDDFSRWMWMFVIKTKDQALEAFTKFKPLA 609

Query: 749  ERGPERKVRTFRTDRGGEFISNEFEKYCKEKGIDRHYTAPYTPQQNGVVERRNRTVVEMA 570
            E    R+++T R+DRGGEF+S EF + C++ GI RH TAPY+PQQNGVVERRNR+V+ MA
Sbjct: 610  ENTAGRRIKTLRSDRGGEFLSGEFAQLCEQAGIQRHLTAPYSPQQNGVVERRNRSVMAMA 669

Query: 569  RSCLKEMKLPKIMWGEAVRHSIYLLNRLPTRALTGVTPYEAWNGRKPHIGHIKVFGCVGH 390
            RS +K M +P   WGEAVRH++YLLNRLPT+A+   TP+EAW GRKP +GH++VFGC+ H
Sbjct: 670  RSLMKGMSVPGRFWGEAVRHAVYLLNRLPTKAMGDRTPFEAWTGRKPQLGHLRVFGCIAH 729

Query: 389  MKIPSQHTLKLDDRSKQVVNLGKEPGTKAYRLYDPLTKRVHVSRDVTFEENKSWPW 222
             KI + +  KLDDRS   V LG E G+KA+RL+DP   R+HVSRDV FEEN  W W
Sbjct: 730  AKITTPNQKKLDDRSAPYVYLGVEEGSKAHRLFDPRCGRIHVSRDVIFEENVPWQW 785


>gb|ABH07409.1| putative pol polyprotein [Brassica oleracea var. botrytis]
          Length = 1239

 Score =  358 bits (918), Expect = 2e-96
 Identities = 163/300 (54%), Positives = 215/300 (71%)
 Frame = -1

Query: 1094 WHKRMGHVNYHALSLMHKNKMVNGMSRIMVSNEVCEGCLMSKQTRKQFPAKSSYSATKAL 915
            WH R+GH+N+  +  M K +MV G+  I    ++CE CL+ KQTR  FP+ + + +++ L
Sbjct: 334  WHARLGHINFKTIKDMAKLEMVRGLPEINEEKKLCESCLVGKQTRNSFPSATPHRSSQVL 393

Query: 914  ELIHGDLCGPIQPETASGKRYFFLLVDDFSRYMWVYFLKAKNEALSAFKNFCALVERGPE 735
            EL+H DLCGPI P T +  RY F+++DD +RYMW   LK K+E    FK F ALVE+   
Sbjct: 394  ELLHADLCGPISPSTLAQNRYIFVIIDDNTRYMWSILLKEKSEVFEKFKTFKALVEKEVN 453

Query: 734  RKVRTFRTDRGGEFISNEFEKYCKEKGIDRHYTAPYTPQQNGVVERRNRTVVEMARSCLK 555
            + + T RTDRGGEF S +F+ YC   GI RH TAPYTPQQNGVVERRNRT++EM RS LK
Sbjct: 454  KVIVTLRTDRGGEFTSRDFQDYCNNNGIRRHLTAPYTPQQNGVVERRNRTLMEMTRSMLK 513

Query: 554  EMKLPKIMWGEAVRHSIYLLNRLPTRALTGVTPYEAWNGRKPHIGHIKVFGCVGHMKIPS 375
             M +P  MWGEAVRH+ YL+NR+PTRAL   TPYE++ GRKP IGHI+VFGC+ + K+ +
Sbjct: 514  AMNVPNYMWGEAVRHATYLINRVPTRALKNQTPYESFKGRKPSIGHIRVFGCLAYAKLDA 573

Query: 374  QHTLKLDDRSKQVVNLGKEPGTKAYRLYDPLTKRVHVSRDVTFEENKSWPWDHSDEEEQD 195
                KLDDRS+ +V+LG EPG+KAYRLY+P T+R+ VSRDV F+E   W W+ +D+  Q+
Sbjct: 574  ALLKKLDDRSQTLVHLGIEPGSKAYRLYNPSTRRIVVSRDVKFDEKACWNWNETDKGNQE 633


>emb|CAE04422.2| OSJNBb0040D15.12 [Oryza sativa Japonica Group]
          Length = 893

 Score =  358 bits (918), Expect = 2e-96
 Identities = 162/292 (55%), Positives = 214/292 (73%)
 Frame = -1

Query: 1097 LWHKRMGHVNYHALSLMHKNKMVNGMSRIMVSNEVCEGCLMSKQTRKQFPAKSSYSATKA 918
            LWH R+GHVN+HAL L+   +MV G+  +   N++C+ CL++KQ R+ FP  ++Y A   
Sbjct: 307  LWHARLGHVNFHALKLLVDKEMVAGVPAVHHPNQLCQACLVAKQVRQSFPGMANYRAEAP 366

Query: 917  LELIHGDLCGPIQPETASGKRYFFLLVDDFSRYMWVYFLKAKNEALSAFKNFCALVERGP 738
            LEL+H DLCGPI P T +G RYF L+VDDFSR+MWV+ +K+K++AL+A + F  L E   
Sbjct: 367  LELLHMDLCGPITPSTFAGNRYFMLIVDDFSRWMWVFVIKSKDQALAASEKFKPLAENTA 426

Query: 737  ERKVRTFRTDRGGEFISNEFEKYCKEKGIDRHYTAPYTPQQNGVVERRNRTVVEMARSCL 558
             R ++T RTDRG EF+S EF + C   GI+RH TAPY+PQQNGVVE RNRTV+ MARS L
Sbjct: 427  GRTIKTLRTDRGSEFLSGEFARVCDAAGIERHLTAPYSPQQNGVVEHRNRTVMAMARSLL 486

Query: 557  KEMKLPKIMWGEAVRHSIYLLNRLPTRALTGVTPYEAWNGRKPHIGHIKVFGCVGHMKIP 378
            K M +P  MWGEAVRH+++LLNRLPT+A+   T +EAW G+KPH+GH+ VFGC  H K+ 
Sbjct: 487  KGMSVPGRMWGEAVRHAVFLLNRLPTKAMGNRTSFEAWMGKKPHLGHLWVFGCTAHTKVT 546

Query: 377  SQHTLKLDDRSKQVVNLGKEPGTKAYRLYDPLTKRVHVSRDVTFEENKSWPW 222
            + H +KLDDRS   V LG E G+KA+RL+DP  +++ VSRDV F+EN  W W
Sbjct: 547  APHLMKLDDRSNPFVYLGVEEGSKAHRLFDPRRRQIIVSRDVVFDENTPWQW 598