BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024747
         (1747 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containi...   764   0.0  
emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]   762   0.0  
ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containi...   732   0.0  
ref|XP_003603831.1| Pentatricopeptide repeat-containing protein ...   726   0.0  
ref|XP_002523825.1| pentatricopeptide repeat-containing protein,...   716   0.0  

>ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Vitis vinifera]
          Length = 531

 Score =  764 bits (1974), Expect = 0.0
 Identities = 382/541 (70%), Positives = 441/541 (81%)
 Frame = -2

Query: 1695 MAITNSKLSFNLYSHFLSPLSTLATKPLPSPSPILEQLDLQNDDADDTETNKPVIELSPS 1516
            MA+  SK+  +L  + LSP+S  + +   S S   E+     D+  ++  +   I LS  
Sbjct: 1    MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEE----EDEVKESGNSAVNIVLSSE 56

Query: 1515 ETLISDKFHAVIKDHHRXXXXXXXXXNTSLTNFTIPSLSFDFSQVSAADSLSAGIVSRVI 1336
            ETL+ +KFH++IK H R              ++TI SLSFDFSQ+S+ADS+S+ IV RVI
Sbjct: 57   ETLVVEKFHSLIKSHQRKNTNPDPISPNP--HYTIASLSFDFSQISSADSVSSAIVRRVI 114

Query: 1335 EKCGGVRHGIPFTQTLAFFNWAMNNLNDTSFANSPEPYNEMIDLAGKVRLFDVAWYLIDL 1156
            EKCGGVRHGIPF QTLAFFNWA N      F +SPEPY EMIDLAGKVR FD+AW LIDL
Sbjct: 115  EKCGGVRHGIPFPQTLAFFNWATNL---EEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDL 171

Query: 1155 MKSRNVEISNYTFAILIRRYVRAGLAAEAIHAFNRMEDYGCKPDKIAFSNVICILCKKRR 976
            MK+RNVEI   TF IL+RRYV+AGLAAEA+HAFNRMEDYGCKPDKIAFS VI  L KKRR
Sbjct: 172  MKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRR 231

Query: 975  ASEAQSFFDGLKDKFESDVIIYTSLVHGWCRAGNISEAERVFSDMKEAGIQPNVYTYSIV 796
            A EAQSFFD LKD+FE DV++YTSLVHGWCRAGNISEAERVF +MK AGIQPNVYTYSIV
Sbjct: 232  AIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIV 291

Query: 795  IDALCRCGQITRAHDVFAEMIDSGCQPNAITFNNLMRVHVKAGRTERVLQVYNQMRKLSC 616
            IDALCR GQITRAHDVF+EMID GC PNAITFNNLMRVHVKAGRTE+VLQVYNQM++L C
Sbjct: 292  IDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGC 351

Query: 615  PADTITYNFLIESHCRGENREEALKVINTMVRKGCAANASTFNPIFRCILKAGDVNSAHR 436
            P D ITYNFLIESHCR +N EEA+K++N+ V+KGC  NAS+FNPIF CI K GDVNSAHR
Sbjct: 352  PPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHR 410

Query: 435  LFAKMKEMKCKPNTVTYNILMRLFADSKSADMVIKLKKEMDEDEIEPNVNTYRILISLYC 256
            +FAKMK++KC+PNTVTYNILMR+FAD KS DMV+KL+KEMDE+EIEPN NTYR+LIS +C
Sbjct: 411  MFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFC 470

Query: 255  GMGHWNNAYKFFREMMEEKCLKPSQGVYEMVLQQLRKAGQIKKHEELVEKMVTRGFVARP 76
            G+GHWNNAY FF+EM+EEKCL+PS  VYEMVLQQLRKAGQ+KKHEELVEKMV RGFV RP
Sbjct: 471  GIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 530

Query: 75   I 73
            +
Sbjct: 531  L 531


>emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
          Length = 1563

 Score =  762 bits (1968), Expect = 0.0
 Identities = 381/541 (70%), Positives = 440/541 (81%)
 Frame = -2

Query: 1695 MAITNSKLSFNLYSHFLSPLSTLATKPLPSPSPILEQLDLQNDDADDTETNKPVIELSPS 1516
            MA+  SK+  +L  + LSP+S  + +   S S   E+     D+  ++  +   I LS  
Sbjct: 1033 MALVKSKVRLSLLRYSLSPVSQHSFRLYSSSSEASEE----EDEVKESGNSAVNIVLSSE 1088

Query: 1515 ETLISDKFHAVIKDHHRXXXXXXXXXNTSLTNFTIPSLSFDFSQVSAADSLSAGIVSRVI 1336
            ETL+ +KFH++IK H R              ++TI SLSFDFSQ+S+ADS+S+ IV RVI
Sbjct: 1089 ETLVVEKFHSLIKSHQRKNTNPDPISPNP--HYTIASLSFDFSQISSADSVSSAIVRRVI 1146

Query: 1335 EKCGGVRHGIPFTQTLAFFNWAMNNLNDTSFANSPEPYNEMIDLAGKVRLFDVAWYLIDL 1156
            EKCGGVRHGIPF QTLAFFNWA N      F +SPEPY EMIDLAGKVR FD+AW LIDL
Sbjct: 1147 EKCGGVRHGIPFPQTLAFFNWATNL---EEFGHSPEPYMEMIDLAGKVRQFDLAWQLIDL 1203

Query: 1155 MKSRNVEISNYTFAILIRRYVRAGLAAEAIHAFNRMEDYGCKPDKIAFSNVICILCKKRR 976
            MK+RNVEI   TF IL+RRYV+AGLAAEA+HAFNRMEDYGCKPDKIAFS VI  L KKRR
Sbjct: 1204 MKTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRR 1263

Query: 975  ASEAQSFFDGLKDKFESDVIIYTSLVHGWCRAGNISEAERVFSDMKEAGIQPNVYTYSIV 796
            A EAQSFFD LKD+FE DV++YTSLVHGWCRAGNISEAERVF +MK AGI PNVYTYSIV
Sbjct: 1264 AIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIV 1323

Query: 795  IDALCRCGQITRAHDVFAEMIDSGCQPNAITFNNLMRVHVKAGRTERVLQVYNQMRKLSC 616
            IDALCR GQITRAHDVF+EMID GC PNAITFNNLMRVHVKAGRTE+VLQVYNQM++L C
Sbjct: 1324 IDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGC 1383

Query: 615  PADTITYNFLIESHCRGENREEALKVINTMVRKGCAANASTFNPIFRCILKAGDVNSAHR 436
            P D ITYNFLIESHCR +N EEA+K++N+ V+KGC  NAS+FNPIF CI K GDVNSAHR
Sbjct: 1384 PPDAITYNFLIESHCRDDNLEEAVKILNS-VKKGCNLNASSFNPIFGCISKLGDVNSAHR 1442

Query: 435  LFAKMKEMKCKPNTVTYNILMRLFADSKSADMVIKLKKEMDEDEIEPNVNTYRILISLYC 256
            +FAKMK++KC+PNTVTYNILMR+FAD KS DMV+KL+KEMDE+EIEPN NTYR+LIS +C
Sbjct: 1443 MFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFC 1502

Query: 255  GMGHWNNAYKFFREMMEEKCLKPSQGVYEMVLQQLRKAGQIKKHEELVEKMVTRGFVARP 76
            G+GHWNNAY FF+EM+EEKCL+PS  VYEMVLQQLRKAGQ+KKHEELVEKMV RGFV RP
Sbjct: 1503 GIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 1562

Query: 75   I 73
            +
Sbjct: 1563 L 1563


>ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
            mitochondrial-like [Glycine max]
          Length = 564

 Score =  732 bits (1890), Expect = 0.0
 Identities = 359/550 (65%), Positives = 433/550 (78%), Gaps = 6/550 (1%)
 Frame = -2

Query: 1704 QTPMAITNSKLSFNL-----YSHFLSPLSTLATKPLPSP-SPILEQLDLQNDDADDTETN 1543
            +TP ++  S L   +     + H LSPL +   KP  S  S ++ +LD+Q D   +    
Sbjct: 25   RTPTSLQTSPLMAFIKPSARFRHSLSPLLSPTFKPYSSSASALVPELDIQPDTPQNPN-- 82

Query: 1542 KPVIELSPSETLISDKFHAVIKDHHRXXXXXXXXXNTSLTNFTIPSLSFDFSQVSAADSL 1363
                 LSP ET ++DKFHA IK+HHR              N TIP LS  FS +SAA  +
Sbjct: 83   -----LSPEETTLADKFHAAIKEHHRRNPTPNPNAPPPTPNLTIPDLSLAFSAISAAHPI 137

Query: 1362 SAGIVSRVIEKCGGVRHGIPFTQTLAFFNWAMNNLNDTSFANSPEPYNEMIDLAGKVRLF 1183
            S  +  RVIEKCGGVRHGIPF Q+LAFFNW+ +      F  SPEPYNEM+DLAGK+R F
Sbjct: 138  SPSVAHRVIEKCGGVRHGIPFLQSLAFFNWSSSL---DGFPASPEPYNEMLDLAGKLRQF 194

Query: 1182 DVAWYLIDLMKSRNVEISNYTFAILIRRYVRAGLAAEAIHAFNRMEDYGCKPDKIAFSNV 1003
            D+AW++IDLMKSR VEI+ +TF+ L+RRYVRAGLAAEA+HAFNRMEDYGC PD +AFS V
Sbjct: 195  DLAWHVIDLMKSRGVEITVHTFSALVRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIV 254

Query: 1002 ICILCKKRRASEAQSFFDGLKDKFESDVIIYTSLVHGWCRAGNISEAERVFSDMKEAGIQ 823
            I  LCKKRRA+EAQSFFD LK +FE DV++YTSLVHGWCRAG+IS+AE VFSDMK AGI+
Sbjct: 255  ISSLCKKRRANEAQSFFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIK 314

Query: 822  PNVYTYSIVIDALCRCGQITRAHDVFAEMIDSGCQPNAITFNNLMRVHVKAGRTERVLQV 643
            PNVYTYSIVID+LCRCGQITRAHDVF+EMID+GC PNA+TFN+LMRVHVKAGRTE+VL+V
Sbjct: 315  PNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKV 374

Query: 642  YNQMRKLSCPADTITYNFLIESHCRGENREEALKVINTMVRKGCAANASTFNPIFRCILK 463
            YNQM++L CPADTI+YNF+IESHCR EN EEA K++N MV+KG A NASTFN IF CI K
Sbjct: 375  YNQMKRLGCPADTISYNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAK 434

Query: 462  AGDVNSAHRLFAKMKEMKCKPNTVTYNILMRLFADSKSADMVIKLKKEMDEDEIEPNVNT 283
              DVN AHR++A+MKE+ C+PNT+TYNILMR+FA+S+S DMV+K+KKEMDE ++EPNVNT
Sbjct: 435  LHDVNGAHRMYARMKELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNT 494

Query: 282  YRILISLYCGMGHWNNAYKFFREMMEEKCLKPSQGVYEMVLQQLRKAGQIKKHEELVEKM 103
            YRILIS++C M HWNNAYK   EM+EEKCL+P+  VYE VL+ LRKAGQ+KKHEELV+KM
Sbjct: 495  YRILISMFCDMKHWNNAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKM 554

Query: 102  VTRGFVARPI 73
            V RGFV RP+
Sbjct: 555  VARGFVTRPL 564


>ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355492879|gb|AES74082.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 530

 Score =  726 bits (1874), Expect = 0.0
 Identities = 361/542 (66%), Positives = 433/542 (79%), Gaps = 1/542 (0%)
 Frame = -2

Query: 1695 MAITNSKLSFNLYSHFLSPLSTLATKPLPSPSPILEQLDLQNDDADDTETNKPVIELSPS 1516
            MA   S+++F+L+ H LSP     T  L S SP++ + D  +++     TN     LSP 
Sbjct: 1    MAFIKSRVNFHLH-HSLSPFLP-HTFRLCSSSPLVSEHDTNDNNTTPQNTN-----LSPE 53

Query: 1515 ETLISDKFHAVIKDHHRXXXXXXXXXNTSLTNFTIPSLSFDFSQVSAADSLSAGIVSRVI 1336
            +T I DKFH +IKDH+R          +   N +IP LS +FS++S   S+S  I  R I
Sbjct: 54   DTHIVDKFHTIIKDHYRKNPNPNAVSPS--LNLSIPDLSIEFSKISTVYSVSPSITRRAI 111

Query: 1335 EKCGGVRHGIPFTQTLAFFNWAMNNLNDTSFANSPEPYNEMIDLAGKVRLFDVAWYLIDL 1156
            EKC GVRHGIPF Q+LAFFNWA        F +SPEPYNEMIDLAGK+R FD+AW+LIDL
Sbjct: 112  EKCSGVRHGIPFLQSLAFFNWATTL---EGFPSSPEPYNEMIDLAGKLRHFDLAWHLIDL 168

Query: 1155 MKSRNVEISNYTFAILIRRYVRAGLAAEAIHAFNRMEDYGCKPDKIAFSNVICILCKKRR 976
            MKSR V I+  TF++L+RRYVRAGLAAEA+HAFNRMEDYGCKPDK++FS VI  LCKKRR
Sbjct: 169  MKSRGVRITVSTFSVLVRRYVRAGLAAEAVHAFNRMEDYGCKPDKVSFSIVISSLCKKRR 228

Query: 975  ASEAQSFFDGLKDKFESDVIIYTSLVHGWCRAGNISEAERVFSDMKEAGIQPNVYTYSIV 796
            ASEA+ FFD LK KFE DVI+YTSLVHGWCRAG+I++AE VFSDMKEAG++PNVYTYSIV
Sbjct: 229  ASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIV 288

Query: 795  IDALCRCGQITRAHDVFAEMIDSGCQPNAITFNNLMRVHVKAGRTERVLQVYNQMRKLSC 616
            ID+LCRCGQITRAHDVF+EMID+GC PNA+TFN+LMRVHVKAGRTE+VLQVYNQM++L C
Sbjct: 289  IDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGC 348

Query: 615  PADTITYNFLIESHCRGENREEALKVINTMVRKGCAANASTFNPIFRCILKAGDVNSAHR 436
             ADTI+YNFLIESHC+ EN +EA+KV++TMV+KG A NASTFN IF CI +  DVN AHR
Sbjct: 349  AADTISYNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHR 408

Query: 435  LFAKMKEMKCKPNTVTYNILMRLFADSKSADMVIKLKKEMDEDEIEPNVNTYRILISLYC 256
            ++AKMKE+KC PNT+TYNILMR+FADSKS DMV+KLKKEMDE E+EPNVNTYRILI ++C
Sbjct: 409  MYAKMKELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFC 468

Query: 255  GMGHWNNAYKFFREMMEEKCLKPSQGVYEMVLQQLRKAGQIKKHEELVEKMVTRGFVA-R 79
              GHWNNAY   +EM+EEKCLKP+  +YE VL+ LR AGQ+KKHEELVEKMV RGFV+ R
Sbjct: 469  EKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFVSPR 528

Query: 78   PI 73
            P+
Sbjct: 529  PL 530


>ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536913|gb|EEF38551.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  716 bits (1847), Expect = 0.0
 Identities = 358/526 (68%), Positives = 417/526 (79%)
 Frame = -2

Query: 1650 FLSPLSTLATKPLPSPSPILEQLDLQNDDADDTETNKPVIELSPSETLISDKFHAVIKDH 1471
            FL   S+  T    S S I +   L+ D  + +        LS  ET +++KFH++IKDH
Sbjct: 21   FLRSFSSSITTSSSSSSIISQSQHLEEDYINPS--------LSFEETTLANKFHSLIKDH 72

Query: 1470 HRXXXXXXXXXNTSLTNFTIPSLSFDFSQVSAADSLSAGIVSRVIEKCGGVRHGIPFTQT 1291
            HR           SL N    SLS DFS  S +  +S  +VS VIEKC  VRHGIPF Q 
Sbjct: 73   HRRNPNF------SLPNTPSHSLSLDFSHFSTSP-VSPSLVSHVIEKCAAVRHGIPFFQA 125

Query: 1290 LAFFNWAMNNLNDTSFANSPEPYNEMIDLAGKVRLFDVAWYLIDLMKSRNVEISNYTFAI 1111
            L+FFNWA +      F + PEPYNEMIDLAGKVR FD+ W +IDLMK+RNVEIS  TF+I
Sbjct: 126  LSFFNWATSR---PGFTHHPEPYNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSI 182

Query: 1110 LIRRYVRAGLAAEAIHAFNRMEDYGCKPDKIAFSNVICILCKKRRASEAQSFFDGLKDKF 931
            LIRRYVRAGLA+EA+HAFNRMEDY CKPDKIAFS +I ILC+KRRA+EAQSFFD LKDKF
Sbjct: 183  LIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDSLKDKF 242

Query: 930  ESDVIIYTSLVHGWCRAGNISEAERVFSDMKEAGIQPNVYTYSIVIDALCRCGQITRAHD 751
            E DVI+YT+LV GWCRAGNI EAERVF++MK AG  PNVYTY+IVIDALCRCGQITRAHD
Sbjct: 243  EPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHD 302

Query: 750  VFAEMIDSGCQPNAITFNNLMRVHVKAGRTERVLQVYNQMRKLSCPADTITYNFLIESHC 571
            VFAEM+D GC+PN+ITFNNL+RVHVKAGRTE+VLQVYNQM+++ CP DT+TYNFLIESHC
Sbjct: 303  VFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHC 362

Query: 570  RGENREEALKVINTMVRKGCAANASTFNPIFRCILKAGDVNSAHRLFAKMKEMKCKPNTV 391
            +  N +EALKV+N+MV+KGC+ NASTFN +F  I K  DVN AHRL+AKMKE+KCK NTV
Sbjct: 363  KDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELKCKANTV 422

Query: 390  TYNILMRLFADSKSADMVIKLKKEMDEDEIEPNVNTYRILISLYCGMGHWNNAYKFFREM 211
            TYNILMR+F D+KS DMV+KLKKEMDED++EPNVNTY +LI++YCGMGHWNNAYKFFREM
Sbjct: 423  TYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVLIAMYCGMGHWNNAYKFFREM 482

Query: 210  MEEKCLKPSQGVYEMVLQQLRKAGQIKKHEELVEKMVTRGFVARPI 73
            +EEKCLKPS  VYE VLQQLRKAGQ+KKHEELV  MV RGF  RP+
Sbjct: 483  VEEKCLKPSLPVYEKVLQQLRKAGQLKKHEELVAVMVDRGFATRPL 528