BLASTX nr result

ID: Bupleurum21_contig00024740 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024740
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycin...    70   2e-10
gb|AFK44472.1| unknown [Lotus japonicus]                               66   3e-09
ref|XP_003529018.1| PREDICTED: methyl-CpG-binding domain-contain...    65   4e-09
ref|XP_003547028.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...    63   3e-08
ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-contain...    61   1e-07

>ref|NP_001242214.1| uncharacterized protein LOC100779601 [Glycine max]
           gi|255634513|gb|ACU17620.1| unknown [Glycine max]
          Length = 261

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/82 (46%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
 Frame = -1

Query: 254 EQEPAKNRLAIVPAR-NIPFSSPH-RLPEGWIVEEVPRSIRRGGYVDKYYYEPGTGRKFR 81
           + E  +N+   +P    I  S  H RLP+GW+VE+ PR      + DKYYYEPGTGRKFR
Sbjct: 17  DDEHLQNQKPTIPMELQIVSSQQHFRLPDGWVVEKKPRPSHESRF-DKYYYEPGTGRKFR 75

Query: 80  SLSSVDRHLAQQNDNTSLSETL 15
           SL SV RHLA +  +  ++ T+
Sbjct: 76  SLLSVQRHLAGETRDYVVANTM 97


>gb|AFK44472.1| unknown [Lotus japonicus]
          Length = 156

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -1

Query: 251 QEPAKNRLAIVPARNIPFSSPHRLPEGWIVEEVPRSIRRGGYVDKYYYEPGTGRKFRSLS 72
           Q P+ N   IV  R +PF +  +LP+ W+VE  PR   +  ++DKYYYEPGTG+KFRSL 
Sbjct: 14  QNPSGNEFQIV--RFMPFPN-FKLPDDWVVETKPRP-SKPTHIDKYYYEPGTGKKFRSLL 69

Query: 71  SVDRHLA 51
           +V RHLA
Sbjct: 70  AVQRHLA 76


>ref|XP_003529018.1| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Glycine max]
          Length = 251

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 32/59 (54%), Positives = 42/59 (71%)
 Frame = -1

Query: 197 SSPHRLPEGWIVEEVPRSIRRGGYVDKYYYEPGTGRKFRSLSSVDRHLAQQNDNTSLSE 21
           SS  RLP+GW+VEE PR+     +VD+YYYEPGT R+FRSL SV RHL  +  +  +S+
Sbjct: 39  SSHFRLPDGWVVEERPRA-SNPSHVDRYYYEPGTRRQFRSLLSVKRHLTGETRDCVISK 96


>ref|XP_003547028.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding
           domain-containing protein 7-like [Glycine max]
          Length = 250

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/69 (46%), Positives = 44/69 (63%)
 Frame = -1

Query: 221 VPARNIPFSSPHRLPEGWIVEEVPRSIRRGGYVDKYYYEPGTGRKFRSLSSVDRHLAQQN 42
           +P   I  SS  RLP+GW++E  PR+     +  KYYYEPGT RKFRSL SV RHLA + 
Sbjct: 19  LPEFQILTSSHFRLPDGWVLEXRPRA-SNPSHFXKYYYEPGTRRKFRSLLSVQRHLAGET 77

Query: 41  DNTSLSETL 15
            +  ++ ++
Sbjct: 78  GDCVVANSI 86


>ref|XP_002281414.2| PREDICTED: methyl-CpG-binding domain-containing protein 7-like
           [Vitis vinifera] gi|297746130|emb|CBI16186.3| unnamed
           protein product [Vitis vinifera]
          Length = 212

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
 Frame = -1

Query: 197 SSPHRLPEGWIVEEVPRSIRRG-GYVDKYYYEPGTGRKFRSLSSVDRHLAQQNDNT 33
           SS  +LP  W+V +V R+  +  G +DKYYYEP TGR+FRSL S+ ++L ++ +NT
Sbjct: 7   SSTFKLPRDWVVRKVRRASGKSCGLIDKYYYEPETGRQFRSLKSIQKYLTEKMENT 62



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 31/78 (39%), Positives = 44/78 (56%)
 Frame = -1

Query: 266 KLHQEQEPAKNRLAIVPARNIPFSSPHRLPEGWIVEEVPRSIRRGGYVDKYYYEPGTGRK 87
           K  +E++P +     +   N+       LP+ W+ ++   S    G + KYYYEPGTGR+
Sbjct: 70  KEEEEEQPHQKMAMQIMDPNL------ELPDNWVFQKRSSS---SGQIHKYYYEPGTGRQ 120

Query: 86  FRSLSSVDRHLAQQNDNT 33
           FRSL SV RHL + ND T
Sbjct: 121 FRSLKSVQRHLIEANDCT 138


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