BLASTX nr result
ID: Bupleurum21_contig00024736
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00024736
(979 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177992.1| trichome birefringence-like 42 [Arabidopsis tha... 253 5e-96
ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802... 253 6e-94
gb|ACU18958.1| unknown [Glycine max] 253 6e-94
ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|2... 239 6e-94
ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810... 249 8e-93
>ref|NP_177992.1| trichome birefringence-like 42 [Arabidopsis thaliana]
gi|3834323|gb|AAC83039.1| F9K20.25 [Arabidopsis
thaliana] gi|332198020|gb|AEE36141.1| trichome
birefringence-like 42 [Arabidopsis thaliana]
Length = 359
Score = 253 bits (647), Expect(2) = 5e-96
Identities = 113/190 (59%), Positives = 147/190 (77%), Gaps = 1/190 (0%)
Frame = +1
Query: 1 RPDKLYLKYRWNPTDCNLARFDGKDFLERCRGKKIMFVGDSLSSNQWQSLTCMVQNAVPG 180
RPDK YL YRW PT C++ RF+G+DFL R +GKKI+FVGDSLS+N W SL+CM+ AVP
Sbjct: 72 RPDKNYLHYRWQPTGCDIPRFNGRDFLTRFKGKKILFVGDSLSNNMWVSLSCMLHAAVPN 131
Query: 181 SKYNLVQRKSFYSLTFPDFGVSIMFMKDGFLVDL-EFRDIGRVLKLDSISTSRSKQWENI 357
+KY K + T P++G+S+ F+K+GFLVDL + G +LKLDSIS R QW
Sbjct: 132 AKYTFQLNKGLSTFTIPEYGISVNFLKNGFLVDLVSDKTRGLILKLDSIS--RGNQWLGS 189
Query: 358 DILIFNSYHWWIHTGRLQTWDYFQVGDKVIKEMDHMEAYKIALSTWAKWVDSNIDPTRTK 537
D+ IFN++HWW HTGR +TWDYFQ GDK++KEM+ MEA+KIAL+TW+KW+D NIDP++T+
Sbjct: 190 DVAIFNTFHWWSHTGRAKTWDYFQTGDKIVKEMNRMEAFKIALTTWSKWIDHNIDPSKTR 249
Query: 538 VFFQGVSAVH 567
VF+QGVS VH
Sbjct: 250 VFYQGVSPVH 259
Score = 125 bits (313), Expect(2) = 5e-96
Identities = 57/108 (52%), Positives = 75/108 (69%), Gaps = 2/108 (1%)
Frame = +3
Query: 555 FCSTLPAVHYEGKEWNEPTAKSCNGQTQPIQGSNFPGKRYPGEPIVKSILSNMATPVILL 734
F + VH G EW +P K+C G+T P+QG ++PG+ GE IVKS++ MA PV LL
Sbjct: 251 FYQGVSPVHLNGGEWGKP-GKTCLGETVPVQGPSYPGRPNEGEAIVKSVIGRMAKPVELL 309
Query: 735 DITLLTQLRKDGHPSRYADGAG--IDCSHWCVAGVPDTWNEILYTMLV 872
D+T +T++RKDGHPS YA G DCSHWC+ GVPD WN++LYT L+
Sbjct: 310 DVTAMTEMRKDGHPSIYAGGGDRLNDCSHWCLPGVPDAWNQLLYTALL 357
>ref|XP_003551901.1| PREDICTED: uncharacterized protein LOC100802364 [Glycine max]
Length = 352
Score = 253 bits (647), Expect(2) = 6e-94
Identities = 115/189 (60%), Positives = 144/189 (76%)
Frame = +1
Query: 1 RPDKLYLKYRWNPTDCNLARFDGKDFLERCRGKKIMFVGDSLSSNQWQSLTCMVQNAVPG 180
RPDK YLKYRW P CNL RF+G+DFL R RG+ +MFVGDSLS NQWQSLTCM+ AVP
Sbjct: 65 RPDKFYLKYRWQPAGCNLTRFNGEDFLRRHRGRSLMFVGDSLSLNQWQSLTCMLHIAVPL 124
Query: 181 SKYNLVQRKSFYSLTFPDFGVSIMFMKDGFLVDLEFRDIGRVLKLDSISTSRSKQWENID 360
+ YNLV+ TFP +GV +MF ++ FLVD+ IGRVLKLDSI ++ W+ ID
Sbjct: 125 APYNLVRNGDLSIFTFPTYGVKVMFSRNAFLVDIVSESIGRVLKLDSIQAGQT--WKGID 182
Query: 361 ILIFNSYHWWIHTGRLQTWDYFQVGDKVIKEMDHMEAYKIALSTWAKWVDSNIDPTRTKV 540
ILIF+S+HWW+HTGR Q WD QVG++ +++M+ + AY+IAL+TWAKW+D NIDPTRT+V
Sbjct: 183 ILIFDSWHWWLHTGRKQPWDLIQVGNRTVRDMNRLVAYEIALNTWAKWIDYNIDPTRTRV 242
Query: 541 FFQGVSAVH 567
FQGVS H
Sbjct: 243 LFQGVSPDH 251
Score = 118 bits (295), Expect(2) = 6e-94
Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Frame = +3
Query: 579 HYEGKEWNEPTAKSCNGQTQPIQGSNFPGKRYPGEPIVKSILSNMATPVILLDITLLTQL 758
H +W EP A C GQT+PI G +PG P E +++ +L M PV LLDIT L+QL
Sbjct: 251 HQNPAQWGEPRANFCAGQTKPISGLRYPGGPNPAEVVLEKVLKAMQKPVYLLDITTLSQL 310
Query: 759 RKDGHPSRYADGA--GIDCSHWCVAGVPDTWNEILYTML 869
R DGHPS Y G +DCSHWC+AGVPDTWNE+LY L
Sbjct: 311 RIDGHPSVYGHGGHLDMDCSHWCLAGVPDTWNELLYVSL 349
>gb|ACU18958.1| unknown [Glycine max]
Length = 352
Score = 253 bits (647), Expect(2) = 6e-94
Identities = 115/189 (60%), Positives = 143/189 (75%)
Frame = +1
Query: 1 RPDKLYLKYRWNPTDCNLARFDGKDFLERCRGKKIMFVGDSLSSNQWQSLTCMVQNAVPG 180
RPDK YLKYRW P CNL RF+G+DFL R RG+ +MFVGDSLS NQWQSLTCM+ AVP
Sbjct: 65 RPDKFYLKYRWQPAGCNLTRFNGEDFLRRHRGRSLMFVGDSLSLNQWQSLTCMLHIAVPL 124
Query: 181 SKYNLVQRKSFYSLTFPDFGVSIMFMKDGFLVDLEFRDIGRVLKLDSISTSRSKQWENID 360
+ YNLV+ TFP +GV +MF ++ FLVD+ IGRVLKLDSI R+ W+ ID
Sbjct: 125 APYNLVRNGDLSIFTFPTYGVKVMFSRNAFLVDIVSESIGRVLKLDSIQAGRT--WKGID 182
Query: 361 ILIFNSYHWWIHTGRLQTWDYFQVGDKVIKEMDHMEAYKIALSTWAKWVDSNIDPTRTKV 540
ILIF+S+HWW+HTGR Q WD Q G++ +++M+ + AY+IAL+TWAKW+D NIDPTRT+V
Sbjct: 183 ILIFDSWHWWLHTGRKQPWDLIQAGNRTVRDMNRLVAYEIALNTWAKWIDYNIDPTRTRV 242
Query: 541 FFQGVSAVH 567
FQGVS H
Sbjct: 243 LFQGVSPDH 251
Score = 118 bits (295), Expect(2) = 6e-94
Identities = 54/99 (54%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Frame = +3
Query: 579 HYEGKEWNEPTAKSCNGQTQPIQGSNFPGKRYPGEPIVKSILSNMATPVILLDITLLTQL 758
H +W EP A C GQT+PI G +PG P E +++ +L M PV LLDIT L+QL
Sbjct: 251 HQNPAQWGEPRANFCAGQTKPISGLRYPGGPNPAEVVLEKVLKAMQKPVYLLDITTLSQL 310
Query: 759 RKDGHPSRYADGA--GIDCSHWCVAGVPDTWNEILYTML 869
R DGHPS Y G +DCSHWC+AGVPDTWNE+LY L
Sbjct: 311 RIDGHPSVYGHGGHLDMDCSHWCLAGVPDTWNELLYVSL 349
>ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|222860508|gb|EEE98055.1|
predicted protein [Populus trichocarpa]
Length = 352
Score = 239 bits (611), Expect(2) = 6e-94
Identities = 111/190 (58%), Positives = 139/190 (73%)
Frame = +1
Query: 1 RPDKLYLKYRWNPTDCNLARFDGKDFLERCRGKKIMFVGDSLSSNQWQSLTCMVQNAVPG 180
RPD LY KYRW P CNL RF+G DFLER RGK IMFVGDSLS NQWQSLTC++ ++VP
Sbjct: 66 RPDSLYTKYRWKPLYCNLQRFNGVDFLERFRGKSIMFVGDSLSRNQWQSLTCILHSSVPK 125
Query: 181 SKYNLVQRKSFYSLTFPDFGVSIMFMKDGFLVDLEFRDIGRVLKLDSISTSRSKQWENID 360
+KYNL ++ + FP++ V +M + +LVD+ IGRVLKLDSI SK W ID
Sbjct: 126 AKYNLTRQGDVSTFAFPEYEVKVMLDRSVYLVDVAREKIGRVLKLDSI--EGSKLWNGID 183
Query: 361 ILIFNSYHWWIHTGRLQTWDYFQVGDKVIKEMDHMEAYKIALSTWAKWVDSNIDPTRTKV 540
+LIFN++HWW G Q WDY QVG+++ K+MD M A++ AL+TWAKWVDSN+DP +T V
Sbjct: 184 MLIFNTWHWWNRRGPTQPWDYIQVGNEIKKDMDRMLAFETALTTWAKWVDSNVDPAKTLV 243
Query: 541 FFQGVSAVHY 570
FFQG+S HY
Sbjct: 244 FFQGISPSHY 253
Score = 132 bits (331), Expect(2) = 6e-94
Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
Frame = +3
Query: 579 HYEGKEWNEPTAKSCNGQTQPIQGSNFPGKRYPGEPIVKSILSNMATPVILLDITLLTQL 758
HY G W+EP+AKSC GQ QP+ GS +PG P ++K +LS + PV LLD+TLL+ L
Sbjct: 252 HYNGTLWDEPSAKSCAGQKQPVAGSTYPGGLPPPVEVLKGVLSKITKPVTLLDVTLLSLL 311
Query: 759 RKDGHPSRYADG--AGIDCSHWCVAGVPDTWNEILYTMLV 872
RKDGHPS Y G G+DCSHWC+ GVPDTWNEILY +++
Sbjct: 312 RKDGHPSIYGLGGSTGLDCSHWCLPGVPDTWNEILYNLII 351
>ref|XP_003552076.1| PREDICTED: uncharacterized protein LOC100810342 [Glycine max]
Length = 361
Score = 249 bits (636), Expect(2) = 8e-93
Identities = 114/189 (60%), Positives = 139/189 (73%)
Frame = +1
Query: 1 RPDKLYLKYRWNPTDCNLARFDGKDFLERCRGKKIMFVGDSLSSNQWQSLTCMVQNAVPG 180
RPDK YLKYRW P CNL RF+G+DFL R RGK IMFVGDSL NQWQSLTCM+ AVP
Sbjct: 74 RPDKFYLKYRWQPAGCNLTRFNGEDFLTRLRGKSIMFVGDSLGLNQWQSLTCMLHTAVPQ 133
Query: 181 SKYNLVQRKSFYSLTFPDFGVSIMFMKDGFLVDLEFRDIGRVLKLDSISTSRSKQWENID 360
+ Y+L + TFP + V +MF ++ LVD+ IGRVLKLDSI + W+ ID
Sbjct: 134 APYSLARNGDVSIFTFPTYDVKVMFSRNALLVDIVGESIGRVLKLDSIQA--GQMWKGID 191
Query: 361 ILIFNSYHWWIHTGRLQTWDYFQVGDKVIKEMDHMEAYKIALSTWAKWVDSNIDPTRTKV 540
++IF+S+HWWIHTGR Q WD QVG++ ++MD + AY+IAL+TWAKWVD NIDPTRT+V
Sbjct: 192 VMIFDSWHWWIHTGRKQPWDLIQVGNRTYRDMDRLVAYEIALNTWAKWVDYNIDPTRTRV 251
Query: 541 FFQGVSAVH 567
FFQGVS H
Sbjct: 252 FFQGVSPDH 260
Score = 118 bits (296), Expect(2) = 8e-93
Identities = 55/100 (55%), Positives = 66/100 (66%), Gaps = 2/100 (2%)
Frame = +3
Query: 579 HYEGKEWNEPTAKSCNGQTQPIQGSNFPGKRYPGEPIVKSILSNMATPVILLDITLLTQL 758
H +W EP A C GQT+PI G +PG P E +++ +L M PV LLDIT L+QL
Sbjct: 260 HQNPAQWGEPRANLCEGQTRPILGFRYPGGPLPAELVLEKVLRAMQKPVYLLDITTLSQL 319
Query: 759 RKDGHPSRYADGAGI--DCSHWCVAGVPDTWNEILYTMLV 872
R DGHPS Y G + DCSHWC+AGVPDTWNE+LY LV
Sbjct: 320 RIDGHPSVYGFGGHLDPDCSHWCLAGVPDTWNELLYASLV 359