BLASTX nr result

ID: Bupleurum21_contig00024732 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024732
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267453.1| PREDICTED: myrcene synthase, chloroplastic [...   102   2e-37
dbj|BAD27258.1| gamma-terpinene synthase [Citrus unshiu]               98   3e-37
dbj|BAD27259.1| gamma-terpinene synthase [Citrus unshiu]               98   3e-37
sp|Q8L5K4.1|GTPS_CITLI RecName: Full=Gamma-terpinene synthase, c...    99   4e-37
ref|XP_003634898.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synt...   100   6e-37

>ref|XP_002267453.1| PREDICTED: myrcene synthase, chloroplastic [Vitis vinifera]
          Length = 594

 Score =  102 bits (254), Expect(2) = 2e-37
 Identities = 48/82 (58%), Positives = 61/82 (74%)
 Frame = -3

Query: 584 FWDKLGLANTLSFARDRLVESFLGVVGIIHAPQSRYSRMQLAKQIQLISSIDDIYDVYGT 405
           +W    L    SFARDRLVE+FL  VG I  PQ  Y R  L K I LI++IDD+YDVYGT
Sbjct: 294 WWTSTRLPEKSSFARDRLVENFLWAVGFIFEPQFGYCRRMLTKLISLITTIDDVYDVYGT 353

Query: 404 LEEVELFTDAIERWDINSIQQV 339
           L+E+ELFTDA++RWDIN+++Q+
Sbjct: 354 LDELELFTDAVDRWDINAMEQL 375



 Score = 80.1 bits (196), Expect(2) = 2e-37
 Identities = 35/62 (56%), Positives = 48/62 (77%)
 Frame = -1

Query: 781 LSMKVKHALKSPLDWRIPRIEARWYIDVYAKSDNMIPAILQLAKLDFNIVQGIYQEDLKN 602
           L+  + HA++ PL WR+ R+EARW+IDVY +S  M P +L+LAKLD+N+VQ  YQEDLK+
Sbjct: 231 LTAIINHAMELPLHWRMLRLEARWFIDVYERSQGMNPILLELAKLDYNMVQATYQEDLKH 290

Query: 601 VS 596
            S
Sbjct: 291 AS 292


>dbj|BAD27258.1| gamma-terpinene synthase [Citrus unshiu]
          Length = 600

 Score = 97.8 bits (242), Expect(2) = 3e-37
 Identities = 47/85 (55%), Positives = 61/85 (71%)
 Frame = -3

Query: 593 VARFWDKLGLANTLSFARDRLVESFLGVVGIIHAPQSRYSRMQLAKQIQLISSIDDIYDV 414
           V+R+W K GL   L+FARDR+VE+F   VG I  PQ  Y R   A    L++SIDD+YDV
Sbjct: 299 VSRWWMKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTSIDDVYDV 358

Query: 413 YGTLEEVELFTDAIERWDINSIQQV 339
           YGTL+E+ELFTDA+ERWD  + +Q+
Sbjct: 359 YGTLDELELFTDAVERWDATATEQL 383



 Score = 84.3 bits (207), Expect(2) = 3e-37
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = -1

Query: 769 VKHALKSPLDWRIPRIEARWYIDVYAKSDNMIPAILQLAKLDFNIVQGIYQEDLKNVSR 593
           VKHAL+ PL WR+ R+EARW+IDVY    +M P +L+LAKLD+NIVQ I+QEDLK VSR
Sbjct: 243 VKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKLDYNIVQAIHQEDLKYVSR 301


>dbj|BAD27259.1| gamma-terpinene synthase [Citrus unshiu]
          Length = 600

 Score = 97.8 bits (242), Expect(2) = 3e-37
 Identities = 47/85 (55%), Positives = 61/85 (71%)
 Frame = -3

Query: 593 VARFWDKLGLANTLSFARDRLVESFLGVVGIIHAPQSRYSRMQLAKQIQLISSIDDIYDV 414
           V+R+W K GL   L+FARDR+VE+F   VG I  PQ  Y R   A    L++SIDD+YDV
Sbjct: 299 VSRWWMKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTSIDDVYDV 358

Query: 413 YGTLEEVELFTDAIERWDINSIQQV 339
           YGTL+E+ELFTDA+ERWD  + +Q+
Sbjct: 359 YGTLDELELFTDAVERWDATATEQL 383



 Score = 84.3 bits (207), Expect(2) = 3e-37
 Identities = 39/59 (66%), Positives = 48/59 (81%)
 Frame = -1

Query: 769 VKHALKSPLDWRIPRIEARWYIDVYAKSDNMIPAILQLAKLDFNIVQGIYQEDLKNVSR 593
           VKHAL+ PL WR+ R+EARW+IDVY    +M P +L+LAKLD+NIVQ I+QEDLK VSR
Sbjct: 243 VKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKLDYNIVQAIHQEDLKYVSR 301


>sp|Q8L5K4.1|GTPS_CITLI RecName: Full=Gamma-terpinene synthase, chloroplastic;
           Short=ClgammaTS; Flags: Precursor
           gi|21435701|gb|AAM53943.1|AF514286_1 gamma-terpinene
           synthase [Citrus limon]
          Length = 600

 Score = 98.6 bits (244), Expect(2) = 4e-37
 Identities = 47/85 (55%), Positives = 61/85 (71%)
 Frame = -3

Query: 593 VARFWDKLGLANTLSFARDRLVESFLGVVGIIHAPQSRYSRMQLAKQIQLISSIDDIYDV 414
           V+R+W K GL   L+FARDR+VE+F   VG I  PQ  Y R   A    L++SIDD+YDV
Sbjct: 299 VSRWWKKTGLGEKLNFARDRVVENFFWTVGDIFEPQFGYCRRMSAMVNCLLTSIDDVYDV 358

Query: 413 YGTLEEVELFTDAIERWDINSIQQV 339
           YGTL+E+ELFTDA+ERWD  + +Q+
Sbjct: 359 YGTLDELELFTDAVERWDATTTEQL 383



 Score = 82.8 bits (203), Expect(2) = 4e-37
 Identities = 37/59 (62%), Positives = 48/59 (81%)
 Frame = -1

Query: 769 VKHALKSPLDWRIPRIEARWYIDVYAKSDNMIPAILQLAKLDFNIVQGIYQEDLKNVSR 593
           VKHAL+ PL WR+ R+EARW+IDVY    +M P +L+LAK+D+NIVQ ++QEDLK VSR
Sbjct: 243 VKHALELPLHWRMRRLEARWFIDVYESGPDMNPILLELAKVDYNIVQAVHQEDLKYVSR 301


>ref|XP_003634898.1| PREDICTED: LOW QUALITY PROTEIN: myrcene synthase,
           chloroplastic-like [Vitis vinifera]
          Length = 600

 Score =  100 bits (250), Expect(2) = 6e-37
 Identities = 45/85 (52%), Positives = 63/85 (74%)
 Frame = -3

Query: 593 VARFWDKLGLANTLSFARDRLVESFLGVVGIIHAPQSRYSRMQLAKQIQLISSIDDIYDV 414
           V+++W  +GL   +SF RDRLVE+FL  VG    PQ  Y R  + K + LI +IDDIYD+
Sbjct: 292 VSKWWKNIGLGEKMSFTRDRLVENFLWAVGHAFEPQFGYCRKIITKVLALIVTIDDIYDI 351

Query: 413 YGTLEEVELFTDAIERWDINSIQQV 339
           YGTL+E+E+FTDA++RWDIN++ Q+
Sbjct: 352 YGTLDELEIFTDAVDRWDINAMDQL 376



 Score = 80.1 bits (196), Expect(2) = 6e-37
 Identities = 35/63 (55%), Positives = 52/63 (82%)
 Frame = -1

Query: 781 LSMKVKHALKSPLDWRIPRIEARWYIDVYAKSDNMIPAILQLAKLDFNIVQGIYQEDLKN 602
           L++ V H+L+ PL WR+ RIEARW+IDV+ +  +M P++L+ AKLD+N+VQ I+QEDLK+
Sbjct: 232 LAILVSHSLELPLHWRMLRIEARWFIDVHERRQDMDPSLLEFAKLDYNMVQAIHQEDLKD 291

Query: 601 VSR 593
           VS+
Sbjct: 292 VSK 294


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