BLASTX nr result

ID: Bupleurum21_contig00024728 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024728
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38018.3| unnamed protein product [Vitis vinifera]              253   1e-65
ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ...   253   1e-65
ref|XP_002455763.1| hypothetical protein SORBIDRAFT_03g024490 [S...   219   2e-55
gb|ACN28188.1| unknown [Zea mays]                                     219   2e-55
gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| T...   219   2e-55

>emb|CBI38018.3| unnamed protein product [Vitis vinifera]
          Length = 834

 Score =  253 bits (645), Expect = 1e-65
 Identities = 126/141 (89%), Positives = 132/141 (93%)
 Frame = +3

Query: 3   DEAPPMFVWGTNISVQDVNAAILRFLRNFRGRDASLEGKYMMAIHHVIEIEGESLEVDAH 182
           DEAPPMFVWGTNISVQDVNAAILRFLR+FR   +  EGKYM AIH V+EIEGESL+VDAH
Sbjct: 115 DEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDVDAH 174

Query: 183 DVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKASTTMRNLN 362
           DVFDYD+DLY KMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLK ST+MRNLN
Sbjct: 175 DVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLN 234

Query: 363 PSDIEKMVSLKGMIIRCSSII 425
           PSDIEKMVSLKGMIIRCSSII
Sbjct: 235 PSDIEKMVSLKGMIIRCSSII 255


>ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera]
          Length = 840

 Score =  253 bits (645), Expect = 1e-65
 Identities = 126/141 (89%), Positives = 132/141 (93%)
 Frame = +3

Query: 3   DEAPPMFVWGTNISVQDVNAAILRFLRNFRGRDASLEGKYMMAIHHVIEIEGESLEVDAH 182
           DEAPPMFVWGTNISVQDVNAAILRFLR+FR   +  EGKYM AIH V+EIEGESL+VDAH
Sbjct: 115 DEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDVDAH 174

Query: 183 DVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKASTTMRNLN 362
           DVFDYD+DLY KMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLK ST+MRNLN
Sbjct: 175 DVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLN 234

Query: 363 PSDIEKMVSLKGMIIRCSSII 425
           PSDIEKMVSLKGMIIRCSSII
Sbjct: 235 PSDIEKMVSLKGMIIRCSSII 255


>ref|XP_002455763.1| hypothetical protein SORBIDRAFT_03g024490 [Sorghum bicolor]
           gi|241927738|gb|EES00883.1| hypothetical protein
           SORBIDRAFT_03g024490 [Sorghum bicolor]
          Length = 852

 Score =  219 bits (558), Expect = 2e-55
 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%)
 Frame = +3

Query: 6   EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161
           +A P+FVWGTNISVQDVNAAILRFLR+FR  RDA        EGKYM AIH ++E+EG E
Sbjct: 122 DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 181

Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341
           SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S
Sbjct: 182 SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 241

Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425
             +RNLNPSDIEKMVS+KGMIIRCSS+I
Sbjct: 242 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 269


>gb|ACN28188.1| unknown [Zea mays]
          Length = 754

 Score =  219 bits (558), Expect = 2e-55
 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%)
 Frame = +3

Query: 6   EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161
           +A P+FVWGTNISVQDVNAAILRFLR+FR  RDA        EGKYM AIH ++E+EG E
Sbjct: 24  DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 83

Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341
           SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S
Sbjct: 84  SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 143

Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425
             +RNLNPSDIEKMVS+KGMIIRCSS+I
Sbjct: 144 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 171


>gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| TPA: DNA
           replication licensing factor mcm4 [Zea mays]
          Length = 850

 Score =  219 bits (558), Expect = 2e-55
 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%)
 Frame = +3

Query: 6   EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161
           +A P+FVWGTNISVQDVNAAILRFLR+FR  RDA        EGKYM AIH ++E+EG E
Sbjct: 120 DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 179

Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341
           SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S
Sbjct: 180 SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 239

Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425
             +RNLNPSDIEKMVS+KGMIIRCSS+I
Sbjct: 240 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 267


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