BLASTX nr result
ID: Bupleurum21_contig00024728
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024728 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI38018.3| unnamed protein product [Vitis vinifera] 253 1e-65 ref|XP_002274534.1| PREDICTED: DNA replication licensing factor ... 253 1e-65 ref|XP_002455763.1| hypothetical protein SORBIDRAFT_03g024490 [S... 219 2e-55 gb|ACN28188.1| unknown [Zea mays] 219 2e-55 gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| T... 219 2e-55 >emb|CBI38018.3| unnamed protein product [Vitis vinifera] Length = 834 Score = 253 bits (645), Expect = 1e-65 Identities = 126/141 (89%), Positives = 132/141 (93%) Frame = +3 Query: 3 DEAPPMFVWGTNISVQDVNAAILRFLRNFRGRDASLEGKYMMAIHHVIEIEGESLEVDAH 182 DEAPPMFVWGTNISVQDVNAAILRFLR+FR + EGKYM AIH V+EIEGESL+VDAH Sbjct: 115 DEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDVDAH 174 Query: 183 DVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKASTTMRNLN 362 DVFDYD+DLY KMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLK ST+MRNLN Sbjct: 175 DVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLN 234 Query: 363 PSDIEKMVSLKGMIIRCSSII 425 PSDIEKMVSLKGMIIRCSSII Sbjct: 235 PSDIEKMVSLKGMIIRCSSII 255 >ref|XP_002274534.1| PREDICTED: DNA replication licensing factor MCM4 [Vitis vinifera] Length = 840 Score = 253 bits (645), Expect = 1e-65 Identities = 126/141 (89%), Positives = 132/141 (93%) Frame = +3 Query: 3 DEAPPMFVWGTNISVQDVNAAILRFLRNFRGRDASLEGKYMMAIHHVIEIEGESLEVDAH 182 DEAPPMFVWGTNISVQDVNAAILRFLR+FR + EGKYM AIH V+EIEGESL+VDAH Sbjct: 115 DEAPPMFVWGTNISVQDVNAAILRFLRHFREHPSHTEGKYMRAIHRVLEIEGESLDVDAH 174 Query: 183 DVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKASTTMRNLN 362 DVFDYD+DLY KMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLK ST+MRNLN Sbjct: 175 DVFDYDSDLYTKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKTSTSMRNLN 234 Query: 363 PSDIEKMVSLKGMIIRCSSII 425 PSDIEKMVSLKGMIIRCSSII Sbjct: 235 PSDIEKMVSLKGMIIRCSSII 255 >ref|XP_002455763.1| hypothetical protein SORBIDRAFT_03g024490 [Sorghum bicolor] gi|241927738|gb|EES00883.1| hypothetical protein SORBIDRAFT_03g024490 [Sorghum bicolor] Length = 852 Score = 219 bits (558), Expect = 2e-55 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%) Frame = +3 Query: 6 EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161 +A P+FVWGTNISVQDVNAAILRFLR+FR RDA EGKYM AIH ++E+EG E Sbjct: 122 DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 181 Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341 SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S Sbjct: 182 SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 241 Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425 +RNLNPSDIEKMVS+KGMIIRCSS+I Sbjct: 242 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 269 >gb|ACN28188.1| unknown [Zea mays] Length = 754 Score = 219 bits (558), Expect = 2e-55 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%) Frame = +3 Query: 6 EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161 +A P+FVWGTNISVQDVNAAILRFLR+FR RDA EGKYM AIH ++E+EG E Sbjct: 24 DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 83 Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341 SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S Sbjct: 84 SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 143 Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425 +RNLNPSDIEKMVS+KGMIIRCSS+I Sbjct: 144 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 171 >gb|ACL52406.1| unknown [Zea mays] gi|414881931|tpg|DAA59062.1| TPA: DNA replication licensing factor mcm4 [Zea mays] Length = 850 Score = 219 bits (558), Expect = 2e-55 Identities = 113/148 (76%), Positives = 129/148 (87%), Gaps = 8/148 (5%) Frame = +3 Query: 6 EAPPMFVWGTNISVQDVNAAILRFLRNFRG-RDASL------EGKYMMAIHHVIEIEG-E 161 +A P+FVWGTNISVQDVNAAILRFLR+FR RDA EGKYM AIH ++E+EG E Sbjct: 120 DATPVFVWGTNISVQDVNAAILRFLRHFRDPRDAGRVDPVMDEGKYMRAIHRILELEGGE 179 Query: 162 SLEVDAHDVFDYDTDLYNKMVRYPLEVLAIFDIVLMDMVSRINPLFEKHIQARIFNLKAS 341 SL+VDAHDVFD+D DLY+KMVRYPLEVLAIFDIVLMD+V+RI PLFEKHIQ RI+NLK+S Sbjct: 180 SLDVDAHDVFDHDPDLYSKMVRYPLEVLAIFDIVLMDLVARIEPLFEKHIQTRIYNLKSS 239 Query: 342 TTMRNLNPSDIEKMVSLKGMIIRCSSII 425 +RNLNPSDIEKMVS+KGMIIRCSS+I Sbjct: 240 ICLRNLNPSDIEKMVSIKGMIIRCSSVI 267