BLASTX nr result

ID: Bupleurum21_contig00024723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024723
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510047.1| DNA binding protein, putative [Ricinus commu...   142   3e-32
ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|2...   129   3e-28
ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...   124   1e-26
ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like ...   122   2e-26

>ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
           gi|223550748|gb|EEF52234.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 408

 Score =  142 bits (358), Expect = 3e-32
 Identities = 79/148 (53%), Positives = 105/148 (70%), Gaps = 8/148 (5%)
 Frame = -3

Query: 422 SHNRGENEKTMLIGSHYRKD---SHDPEDKASPNRKNKRKASDSNSLVHSNKNEEE-RQD 255
           S++   NE+T+   +  ++D   S +P    SP+ K +++ ++ +S    NKN EE  +D
Sbjct: 130 SNSAANNERTITNSALSQEDHQLSEEPVVGVSPDGKRRKRLAEPSSPFDPNKNAEEMHKD 189

Query: 254 PSA----ISLEEDEMKQKIEQNNISNLRGKQTGKQAKEISNSGDAAKDDYIHVRAKRGQA 87
           PS     I  E+DE K + EQN  +NLRGKQ  KQAKE S+SG+A K++YIHVRA+RGQA
Sbjct: 190 PSGNSSDIPKEQDEKKSRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQA 249

Query: 86  TNSHSLAERVRRERISERMKLLQELVPG 3
           TNSHSLAERVRRE+ISERM+LLQELVPG
Sbjct: 250 TNSHSLAERVRREKISERMRLLQELVPG 277


>ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  140 bits (354), Expect = 8e-32
 Identities = 81/143 (56%), Positives = 99/143 (69%), Gaps = 9/143 (6%)
 Frame = -3

Query: 404 NEKTMLIGSHYRKDSHDPEDK---ASPNRKNKRKASDSNSLVHSNKNEEE--RQDPSA-- 246
           N ++   G+   +D    E+    A PN K +R  ++SNS    NKN E   ++DPS   
Sbjct: 133 NNESTAHGAQREEDQQLSEETTIGALPNGKRRRLVAESNSPFDPNKNAEGEFQKDPSGES 192

Query: 245 --ISLEEDEMKQKIEQNNISNLRGKQTGKQAKEISNSGDAAKDDYIHVRAKRGQATNSHS 72
             I+ E DE KQKIEQN  +NLRGKQ  KQAK+   SG+A KDDYIHVRA+RGQATNSHS
Sbjct: 193 SDIAKELDEKKQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSHS 252

Query: 71  LAERVRRERISERMKLLQELVPG 3
           LAERVRRE+ISERM++LQELVPG
Sbjct: 253 LAERVRREKISERMRMLQELVPG 275


>ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|222844112|gb|EEE81659.1|
           predicted protein [Populus trichocarpa]
          Length = 330

 Score =  129 bits (324), Expect = 3e-28
 Identities = 71/119 (59%), Positives = 87/119 (73%), Gaps = 6/119 (5%)
 Frame = -3

Query: 341 ASPNRKNKRKASDSNSLVHSNKNEEE--RQDPSA----ISLEEDEMKQKIEQNNISNLRG 180
           ASPN K +++  +SNS +  NKN E   R+D S     I+ E DE  QK EQN   NLRG
Sbjct: 80  ASPNGKRRKRVPESNSPLDPNKNTEGELRKDLSGESCDIAKELDEKTQKTEQNPGPNLRG 139

Query: 179 KQTGKQAKEISNSGDAAKDDYIHVRAKRGQATNSHSLAERVRRERISERMKLLQELVPG 3
           KQ  KQAK+ + SG+  K++Y HVRA+RGQATNSHSLAERVRRE+ISERM++LQELVPG
Sbjct: 140 KQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAERVRREKISERMRMLQELVPG 198


>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
           gi|302142156|emb|CBI19359.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/119 (54%), Positives = 88/119 (73%), Gaps = 6/119 (5%)
 Frame = -3

Query: 341 ASPNRKNKRKASDSNSLVHSNKNEEERQ------DPSAISLEEDEMKQKIEQNNISNLRG 180
           ASP+ K ++ + D    ++++K+ +  Q      + S  S E++E K KI+QN   NLRG
Sbjct: 182 ASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWENSEFSKEQEEKKLKIDQNMSPNLRG 241

Query: 179 KQTGKQAKEISNSGDAAKDDYIHVRAKRGQATNSHSLAERVRRERISERMKLLQELVPG 3
           KQ  K AK+ S++G+A K++YIHVRA+RGQATNSHSLAERVRRE+ISERM+LLQELVPG
Sbjct: 242 KQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSHSLAERVRREKISERMRLLQELVPG 300


>ref|XP_003556954.1| PREDICTED: transcription factor bHLH74-like [Glycine max]
          Length = 435

 Score =  122 bits (307), Expect = 2e-26
 Identities = 71/150 (47%), Positives = 100/150 (66%), Gaps = 10/150 (6%)
 Frame = -3

Query: 422 SHNRGENEKTMLIGSHYRKDSHDPEDKA---SPNRKNKRKASDSNSLVHSNKNEEE---R 261
           +H     E  ++ G   + +   PE++A   +P+   +++  D NS    NKN E    +
Sbjct: 155 THYNPIKEAPIINGEQSQVEDSIPEEEAPGSAPSGNRRKRGLDHNSTFSPNKNAEGDAVK 214

Query: 260 QDPSAIS--LEEDEMKQKIEQNNISNLRGKQTGKQAKEISNS--GDAAKDDYIHVRAKRG 93
             P   S   +E E + K+EQNN +++RGKQ+ KQAK+ +NS  G+A K+++IHVRA+RG
Sbjct: 215 DSPGKASDGSKEHEKRPKVEQNNGADVRGKQSVKQAKDNNNSQSGEAPKENFIHVRARRG 274

Query: 92  QATNSHSLAERVRRERISERMKLLQELVPG 3
           QATNSHSLAERVRRE+ISERM+LLQELVPG
Sbjct: 275 QATNSHSLAERVRREKISERMRLLQELVPG 304


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