BLASTX nr result

ID: Bupleurum21_contig00024722 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024722
         (650 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas ...    60   3e-07
ref|XP_001581403.1| viral A-type inclusion protein [Trichomonas ...    57   2e-06
ref|YP_003056891.1| hypothetical protein HELPY_0051 [Helicobacte...    55   9e-06
ref|XP_002808642.1| conserved Plasmodium protein, unknown functi...    55   9e-06

>ref|XP_001318162.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
            gi|121900914|gb|EAY05939.1| viral A-type inclusion
            protein, putative [Trichomonas vaginalis G3]
          Length = 5296

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 1/134 (0%)
 Frame = -2

Query: 577  QEKEESRQQLLSETLSLRNERRQLSARVEELQ-KANKSLEAAKKGWEVEKGELVKSQKEL 401
            ++ EE + +L  E     NE ++L   ++EL  K  KS E  K   +   G   K  ++L
Sbjct: 3198 KQLEEEKSKLEDENSQNENEIQRLKDTIKELSDKLAKSEEDNKLLKQSSSGTTDKQVEDL 3257

Query: 400  SEQNSNFVKDVAGLKSENTQLKQNVLEKDQELEKVANQTLNKTGTSTAQAGGGENEQMAG 221
             E  +    D+  L SEN QLKQ   +KDQ  EK+ N   +KT   T      +NEQ++ 
Sbjct: 3258 QEMLNKLRDDLKNLNSENEQLKQ---QKDQLSEKLNNSNNDKTKAET------QNEQLSK 3308

Query: 220  NEEQVNQEKKKMGN 179
              EQ+N EK +M N
Sbjct: 3309 QLEQLNNEKNQMFN 3322


>ref|XP_001581403.1| viral A-type inclusion protein [Trichomonas vaginalis G3]
            gi|121915630|gb|EAY20417.1| viral A-type inclusion
            protein, putative [Trichomonas vaginalis G3]
          Length = 4263

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 32/104 (30%), Positives = 56/104 (53%)
 Frame = -2

Query: 583  EKQEKEESRQQLLSETLSLRNERRQLSARVEELQKANKSLEAAKKGWEVEKGELVKSQKE 404
            EK   E+ + +L+ E  +L  E+ QL  + + L++  + LE  K     +K  L + + +
Sbjct: 2419 EKTNLEQEKAKLIEEKTNLEQEKSQLLDQKKNLEEEKQRLETEKAKLIEDKTNLEQEKAQ 2478

Query: 403  LSEQNSNFVKDVAGLKSENTQLKQNVLEKDQELEKVANQTLNKT 272
            L EQ  N  ++ A L+ E  Q ++ + EKDQE+E + +Q   KT
Sbjct: 2479 LLEQKKNLEEEKAKLEEEKAQAQKTIEEKDQEIEDLTSQINVKT 2522


>ref|YP_003056891.1| hypothetical protein HELPY_0051 [Helicobacter pylori B38]
           gi|254000697|emb|CAX28608.1| Conserved hypothetical
           protein [Helicobacter pylori B38]
          Length = 325

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 34/134 (25%), Positives = 66/134 (49%), Gaps = 1/134 (0%)
 Frame = -2

Query: 583 EKQEKEESRQQLLSETLSLRNERRQLSARVEELQKANKSLEAAKKGWEVEKGELVKSQKE 404
           EK+  E   + L +E  +L  E+ +L+ +  ELQK  K+LE +++  +    EL+K +++
Sbjct: 64  EKERLERENKNLTAEKENLTKEKTELTNKNAELQKQVKALEQSQQALKNGNDELLKDREK 123

Query: 403 LSEQNSNFVKDVAGLKSENTQLKQNVLEKDQELEKVANQTLN-KTGTSTAQAGGGENEQM 227
           L+ QN+   + +  L +E T+L   +     + E +     N  T  STA+    +  Q 
Sbjct: 124 LTTQNTELAEKIKALTTEKTELNNKITRLTTDKENLTKDKENLTTALSTAKTQAEQTSQK 183

Query: 226 AGNEEQVNQEKKKM 185
               E+ +   +K+
Sbjct: 184 LNELERRHAPYQKL 197


>ref|XP_002808642.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
            3D7] gi|225631625|emb|CAX63912.1| conserved Plasmodium
            protein, unknown function [Plasmodium falciparum 3D7]
          Length = 3358

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 31/135 (22%), Positives = 70/135 (51%), Gaps = 2/135 (1%)
 Frame = -2

Query: 583  EKQEKEESRQQLLSETLSLRNERRQLSARVEELQKANKSLEAAKKGWEVEKGELVKSQKE 404
            +K+EK E ++ +  E  ++  ++  ++ + E + +  +++ A K+    EK  +   ++ 
Sbjct: 2451 KKEEKTEKKENMTEEKENMTEKKENMTEKKENMTEKKENMTAEKENMTAEKENMTAEKEN 2510

Query: 403  LSEQNSNFVKDVAGLKSENTQLKQNVLEKDQE--LEKVANQTLNKTGTSTAQAGGGENEQ 230
            ++E+  N  ++    K + T+ K+ V EK++E   E+  N T  K   +       E EQ
Sbjct: 2511 MTEEKENMTEE----KEKMTEEKEQVTEKEKEKMTEEKENMTEKKENMTE------EKEQ 2560

Query: 229  MAGNEEQVNQEKKKM 185
            +   +EQ+ +EK++M
Sbjct: 2561 ITEEKEQITEEKEQM 2575


Top