BLASTX nr result

ID: Bupleurum21_contig00024721 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024721
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_004139697.1| PREDICTED: uncharacterized protein LOC101218...    59   4e-07
ref|XP_002533796.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002325566.1| predicted protein [Populus trichocarpa] gi|1...    58   7e-07
emb|CBI38126.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002327327.1| predicted protein [Populus trichocarpa] gi|222835697|gb|EEE74132.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 32/46 (69%), Positives = 36/46 (78%), Gaps = 8/46 (17%)
 Frame = -1

Query: 149 ANINFLSSSKVTPQP--------TGPPRLVRSRAVRRDIMQDWNFD 36
           AN +F SSSKVTPQP        TGPPRLVRSRAVRRD+++DWNFD
Sbjct: 50  ANSSFASSSKVTPQPSSPGNDDMTGPPRLVRSRAVRRDLVRDWNFD 95


>ref|XP_004139697.1| PREDICTED: uncharacterized protein LOC101218997 isoform 1 [Cucumis
           sativus] gi|449443869|ref|XP_004139698.1| PREDICTED:
           uncharacterized protein LOC101218997 isoform 2 [Cucumis
           sativus] gi|449443871|ref|XP_004139699.1| PREDICTED:
           uncharacterized protein LOC101218997 isoform 3 [Cucumis
           sativus] gi|449532276|ref|XP_004173108.1| PREDICTED:
           uncharacterized LOC101218997 [Cucumis sativus]
          Length = 101

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 28/48 (58%), Positives = 37/48 (77%), Gaps = 8/48 (16%)
 Frame = -1

Query: 140 NFLSSSKVTPQPT--------GPPRLVRSRAVRRDIMQDWNFDESIVM 21
           ++ +S+KVTPQPT        G PRLVRSRAVRRD+++DWNFDE +V+
Sbjct: 52  SYAASAKVTPQPTMSDSDVMDGTPRLVRSRAVRRDLVRDWNFDEVVVV 99


>ref|XP_002533796.1| conserved hypothetical protein [Ricinus communis]
           gi|223526269|gb|EEF28583.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 28/49 (57%), Positives = 36/49 (73%), Gaps = 8/49 (16%)
 Frame = -1

Query: 146 NINFLSSSKVTPQP--------TGPPRLVRSRAVRRDIMQDWNFDESIV 24
           N +  S+SKVTPQP        TGPPRLVRSRAVRRD+++DWNF+  ++
Sbjct: 51  NSSIASTSKVTPQPSNPGNDEITGPPRLVRSRAVRRDLVRDWNFERVVM 99


>ref|XP_002325566.1| predicted protein [Populus trichocarpa] gi|118482956|gb|ABK93390.1|
           unknown [Populus trichocarpa]
           gi|222862441|gb|EEE99947.1| predicted protein [Populus
           trichocarpa]
          Length = 102

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/47 (65%), Positives = 36/47 (76%), Gaps = 9/47 (19%)
 Frame = -1

Query: 149 ANINFLSSS-KVTPQP--------TGPPRLVRSRAVRRDIMQDWNFD 36
           AN +F SSS KV+PQP        TGPPRLVRSRAVRRD+++DWNFD
Sbjct: 50  ANSSFASSSSKVSPQPLNPSNDSMTGPPRLVRSRAVRRDLVRDWNFD 96


>emb|CBI38126.3| unnamed protein product [Vitis vinifera]
          Length = 220

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/50 (56%), Positives = 35/50 (70%), Gaps = 8/50 (16%)
 Frame = -1

Query: 149 ANINFLSSSKVTPQPT--------GPPRLVRSRAVRRDIMQDWNFDESIV 24
           AN + + SSKVTP P+        G PRLVRS AVRRDI++DWNFDE ++
Sbjct: 169 ANSSIIRSSKVTPHPSIPNSSGIPGTPRLVRSCAVRRDIVRDWNFDEVVM 218


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