BLASTX nr result

ID: Bupleurum21_contig00024697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024697
         (367 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]         72   5e-11
dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]        71   8e-11
gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsi...    65   7e-09
gb|ACF86826.1| unknown [Zea mays]                                      64   1e-08
ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea ma...    64   1e-08

>dbj|BAB02729.1| unnamed protein product [Arabidopsis thaliana]
          Length = 579

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/82 (41%), Positives = 55/82 (67%)
 Frame = +1

Query: 1   YLDEPVLPWTQDFDLMSWWRTESPKYPILSKMACDLLAIPLTVARSYEAYMHKDFRSADK 180
           YL EPV+ W +DF  + WW+ ES KYPILS++A D+L+IP++ A SY+AY+  D R   +
Sbjct: 499 YLKEPVMKWNKDFKALEWWKEESQKYPILSRVARDILSIPISRAESYDAYV-VDRREPPE 557

Query: 181 SLASVGTKSPALVYALACTRSY 246
            + S+ +K   +  A+ C++ +
Sbjct: 558 FVVSMKSK---VANAMMCSKKW 576


>dbj|BAB02733.1| transposase-like protein [Arabidopsis thaliana]
          Length = 554

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/82 (43%), Positives = 52/82 (63%)
 Frame = +1

Query: 1   YLDEPVLPWTQDFDLMSWWRTESPKYPILSKMACDLLAIPLTVARSYEAYMHKDFRSADK 180
           YL EPV+ W +DF+ + WWR E+ KYPILS +A D+L+IP+T   S+ AY+  D R    
Sbjct: 474 YLKEPVMEWKKDFNALEWWREENSKYPILSGVARDILSIPITRGTSHRAYV-ADKRECPD 532

Query: 181 SLASVGTKSPALVYALACTRSY 246
            + S+  K   LV A+ C+ S+
Sbjct: 533 FIVSMEAK---LVNAMMCSESW 551


>gb|AAG52564.1|AC010675_12 unknown protein; 6859-4829 [Arabidopsis thaliana]
          Length = 676

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +1

Query: 1   YLDEPVLPWTQDFDLMSWWRTESPKYPILSKMACDLLAIP-LTVARSYEAYMHKDFRSAD 177
           YL+EP+ P   DFD+++WW+  +PKYPILS MA ++LA+P L V+   +A+     R   
Sbjct: 589 YLEEPLFPRNSDFDILNWWKVHTPKYPILSMMARNVLAVPMLNVSSEEDAFETCQRRRVS 648

Query: 178 KSLASVGTKSPALVYALACTRSY 246
           ++  S+    P+ V AL C + +
Sbjct: 649 ETWRSL---RPSTVQALMCAQDW 668


>gb|ACF86826.1| unknown [Zea mays]
          Length = 109

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
 Frame = +1

Query: 1   YLDEPVLPWTQDFDLMSWWRTESPKYPILSKMACDLLAIPLTVARSYEAY--------MH 156
           YLDE + P TQ+FD+++WW+    K+P LS+MACD+LAIP+++  S  +         M 
Sbjct: 19  YLDESLTPRTQEFDILNWWKLNRVKFPTLSRMACDILAIPMSMVSSGSSIFTAGTGSRML 78

Query: 157 KDFRSADKSLASVGTKSPALVYALACTRSY 246
            D+RS+ +         P  V AL C + +
Sbjct: 79  DDYRSSLR---------PETVEALVCAKDW 99


>ref|NP_001136571.1| uncharacterized protein LOC100216693 [Zea mays]
           gi|194696216|gb|ACF82192.1| unknown [Zea mays]
          Length = 503

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/90 (36%), Positives = 51/90 (56%), Gaps = 8/90 (8%)
 Frame = +1

Query: 1   YLDEPVLPWTQDFDLMSWWRTESPKYPILSKMACDLLAIPLTVARSYEAY--------MH 156
           YLDE + P TQ+FD+++WW+    K+P LS+MACD+LAIP+++  S  +         M 
Sbjct: 413 YLDESLTPRTQEFDILNWWKLNRVKFPTLSRMACDILAIPMSMVSSGSSIFTAGTGSRML 472

Query: 157 KDFRSADKSLASVGTKSPALVYALACTRSY 246
            D+RS+ +         P  V AL C + +
Sbjct: 473 DDYRSSLR---------PETVEALVCAKDW 493


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