BLASTX nr result

ID: Bupleurum21_contig00024693 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024693
         (392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm...    64   2e-08
ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] g...    63   2e-08
ref|XP_003525304.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re...    62   5e-08
ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g2942...    61   1e-07
ref|XP_002455017.1| hypothetical protein SORBIDRAFT_03g003020 [S...    60   2e-07

>ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis]
           gi|223530307|gb|EEF32202.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 460

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 26/58 (44%), Positives = 44/58 (75%)
 Frame = -1

Query: 176 LMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLTLKNVTMFDDDLEKLLECLPCL 3
           ++ ++SS C  L+EL++KN++L  D + PMP+LTSLTL+++ + D++L K+  C PCL
Sbjct: 151 ILALVSSCCHGLLELEVKNSWLSVDGLIPMPVLTSLTLESIRLDDENLSKVNHCFPCL 208



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/64 (46%), Positives = 43/64 (67%)
 Frame = -1

Query: 380 LKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTLQDV 201
           LK +SI DF  Q+  R + IL ++S  CH L+EL +KN+ L VD + PMP+LT LTL+ +
Sbjct: 132 LKFLSISDFWIQACWRRSQILALVSSCCHGLLELEVKNSWLSVDGLIPMPVLTSLTLESI 191

Query: 200 TMSD 189
            + D
Sbjct: 192 RLDD 195


>ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group]
           gi|113531812|dbj|BAF04195.1| Os01g0193500 [Oryza sativa
           Japonica Group]
          Length = 453

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 7/77 (9%)
 Frame = -1

Query: 212 LQDVTMSDY-------QYTLMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLTLKNV 54
           L++V ++DY       +   + V+S  C SL++L+LKNA+L  D +  MP LT LTL+ +
Sbjct: 145 LREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNAWLSVDGLKIMPNLTHLTLEFI 204

Query: 53  TMFDDDLEKLLECLPCL 3
            + D+DL KL EC PCL
Sbjct: 205 RLDDEDLNKLNECFPCL 221



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 30/67 (44%), Positives = 44/67 (65%)
 Frame = -1

Query: 389 GDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTL 210
           G+ L+ + + D+  QS  R+   L VIS+ CHSL++L LKNA L VD ++ MP LT LTL
Sbjct: 142 GNALREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNAWLSVDGLKIMPNLTHLTL 201

Query: 209 QDVTMSD 189
           + + + D
Sbjct: 202 EFIRLDD 208


>ref|XP_003525304.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein
           At4g29420-like [Glycine max]
          Length = 170

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 32/68 (47%), Positives = 43/68 (63%)
 Frame = -1

Query: 392 IGDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLT 213
           + D LKS S+ DF  QS  R +  L +IS  CH+LV+L ++NA L VD +  MP LT LT
Sbjct: 75  VSDALKSFSVSDFWVQSCWRRSEALSLISSTCHNLVKLVVRNAWLSVDGLCLMPTLTYLT 134

Query: 212 LQDVTMSD 189
           L+ V + D
Sbjct: 135 LEFVRLDD 142


>ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Brachypodium
           distachyon]
          Length = 448

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/67 (44%), Positives = 42/67 (62%)
 Frame = -1

Query: 389 GDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTL 210
           G  L+ + I DF  QS  R+   L VIS+ CH+L +L L+NA LCVD ++ MP LT L L
Sbjct: 139 GPSLREVDIADFWPQSCWRKAEALPVISHFCHNLSKLGLRNAWLCVDGLKIMPNLTHLAL 198

Query: 209 QDVTMSD 189
           + + + D
Sbjct: 199 EFIRLDD 205


>ref|XP_002455017.1| hypothetical protein SORBIDRAFT_03g003020 [Sorghum bicolor]
           gi|241926992|gb|EES00137.1| hypothetical protein
           SORBIDRAFT_03g003020 [Sorghum bicolor]
          Length = 416

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
 Frame = -1

Query: 224 TKLTLQDVTMSDY-------QYTLMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLT 66
           T   L+++ ++DY       +   + ++S  CQ+LV+L LKNA+L  + +  MP LT LT
Sbjct: 104 TAAVLRELEIADYWPQACWRKAEALPLISHYCQNLVKLGLKNAWLSVEGLKKMPNLTHLT 163

Query: 65  LKNVTMFDDDLEKLLECLPCL 3
           L+ + + D+DL +L EC PCL
Sbjct: 164 LEFIRLDDEDLNQLNECFPCL 184


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