BLASTX nr result
ID: Bupleurum21_contig00024693
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00024693 (392 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002530188.1| conserved hypothetical protein [Ricinus comm... 64 2e-08 ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] g... 63 2e-08 ref|XP_003525304.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-re... 62 5e-08 ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g2942... 61 1e-07 ref|XP_002455017.1| hypothetical protein SORBIDRAFT_03g003020 [S... 60 2e-07 >ref|XP_002530188.1| conserved hypothetical protein [Ricinus communis] gi|223530307|gb|EEF32202.1| conserved hypothetical protein [Ricinus communis] Length = 460 Score = 63.5 bits (153), Expect = 2e-08 Identities = 26/58 (44%), Positives = 44/58 (75%) Frame = -1 Query: 176 LMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLTLKNVTMFDDDLEKLLECLPCL 3 ++ ++SS C L+EL++KN++L D + PMP+LTSLTL+++ + D++L K+ C PCL Sbjct: 151 ILALVSSCCHGLLELEVKNSWLSVDGLIPMPVLTSLTLESIRLDDENLSKVNHCFPCL 208 Score = 62.4 bits (150), Expect = 4e-08 Identities = 30/64 (46%), Positives = 43/64 (67%) Frame = -1 Query: 380 LKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTLQDV 201 LK +SI DF Q+ R + IL ++S CH L+EL +KN+ L VD + PMP+LT LTL+ + Sbjct: 132 LKFLSISDFWIQACWRRSQILALVSSCCHGLLELEVKNSWLSVDGLIPMPVLTSLTLESI 191 Query: 200 TMSD 189 + D Sbjct: 192 RLDD 195 >ref|NP_001042281.1| Os01g0193500 [Oryza sativa Japonica Group] gi|113531812|dbj|BAF04195.1| Os01g0193500 [Oryza sativa Japonica Group] Length = 453 Score = 63.2 bits (152), Expect = 2e-08 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 7/77 (9%) Frame = -1 Query: 212 LQDVTMSDY-------QYTLMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLTLKNV 54 L++V ++DY + + V+S C SL++L+LKNA+L D + MP LT LTL+ + Sbjct: 145 LREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNAWLSVDGLKIMPNLTHLTLEFI 204 Query: 53 TMFDDDLEKLLECLPCL 3 + D+DL KL EC PCL Sbjct: 205 RLDDEDLNKLNECFPCL 221 Score = 62.0 bits (149), Expect = 5e-08 Identities = 30/67 (44%), Positives = 44/67 (65%) Frame = -1 Query: 389 GDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTL 210 G+ L+ + + D+ QS R+ L VIS+ CHSL++L LKNA L VD ++ MP LT LTL Sbjct: 142 GNALREVDVADYWPQSCWRKAEALPVISHFCHSLLKLRLKNAWLSVDGLKIMPNLTHLTL 201 Query: 209 QDVTMSD 189 + + + D Sbjct: 202 EFIRLDD 208 >ref|XP_003525304.1| PREDICTED: LOW QUALITY PROTEIN: F-box/LRR-repeat protein At4g29420-like [Glycine max] Length = 170 Score = 62.0 bits (149), Expect = 5e-08 Identities = 32/68 (47%), Positives = 43/68 (63%) Frame = -1 Query: 392 IGDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLT 213 + D LKS S+ DF QS R + L +IS CH+LV+L ++NA L VD + MP LT LT Sbjct: 75 VSDALKSFSVSDFWVQSCWRRSEALSLISSTCHNLVKLVVRNAWLSVDGLCLMPTLTYLT 134 Query: 212 LQDVTMSD 189 L+ V + D Sbjct: 135 LEFVRLDD 142 >ref|XP_003564798.1| PREDICTED: F-box/LRR-repeat protein At4g29420-like [Brachypodium distachyon] Length = 448 Score = 60.8 bits (146), Expect = 1e-07 Identities = 30/67 (44%), Positives = 42/67 (62%) Frame = -1 Query: 389 GDGLKSISIEDFLAQSYGRETNILEVISYHCHSLVELTLKNACLCVDDMRPMPLLTKLTL 210 G L+ + I DF QS R+ L VIS+ CH+L +L L+NA LCVD ++ MP LT L L Sbjct: 139 GPSLREVDIADFWPQSCWRKAEALPVISHFCHNLSKLGLRNAWLCVDGLKIMPNLTHLAL 198 Query: 209 QDVTMSD 189 + + + D Sbjct: 199 EFIRLDD 205 >ref|XP_002455017.1| hypothetical protein SORBIDRAFT_03g003020 [Sorghum bicolor] gi|241926992|gb|EES00137.1| hypothetical protein SORBIDRAFT_03g003020 [Sorghum bicolor] Length = 416 Score = 59.7 bits (143), Expect = 2e-07 Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 7/81 (8%) Frame = -1 Query: 224 TKLTLQDVTMSDY-------QYTLMGVLSSICQSLVELKLKNAYLDFDDMHPMPLLTSLT 66 T L+++ ++DY + + ++S CQ+LV+L LKNA+L + + MP LT LT Sbjct: 104 TAAVLRELEIADYWPQACWRKAEALPLISHYCQNLVKLGLKNAWLSVEGLKKMPNLTHLT 163 Query: 65 LKNVTMFDDDLEKLLECLPCL 3 L+ + + D+DL +L EC PCL Sbjct: 164 LEFIRLDDEDLNQLNECFPCL 184