BLASTX nr result

ID: Bupleurum21_contig00024688 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024688
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002333861.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_002532212.1| long-chain-fatty-acid CoA ligase, putative [...    96   4e-18
gb|ACF17664.1| putative long-chain acyl-CoA synthetase [Capsicum...    93   2e-17
gb|ADV16379.1| long-chain acyl-CoA synthetase 2 [Helianthus annuus]    87   1e-15
ref|XP_003556895.1| PREDICTED: long chain acyl-CoA synthetase 8-...    83   3e-14

>ref|XP_002333861.1| predicted protein [Populus trichocarpa] gi|222838734|gb|EEE77099.1|
           predicted protein [Populus trichocarpa]
          Length = 199

 Score =  110 bits (274), Expect = 2e-22
 Identities = 58/100 (58%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
 Frame = +2

Query: 53  MEDSEGNHLKSPLMGRSEIASYFSAFKENKSYGILGALFVSIVIP-LITTMFMSKKKPKQ 229
           M DSEG+   SP++ + +   Y S  K   +YGI+GA  V+I+IP L++T+FM KKK KQ
Sbjct: 1   MADSEGSFPSSPVLDKLDSNDYSSVGKGYGTYGIVGAAAVAILIPILLSTIFMGKKKVKQ 60

Query: 230 RGVEAAVAGESGYAVRNARTAQLLEVPWEGADTMAALFEQ 349
           RGV   V GE+GYAVRNAR A+L+EVPW+GA TMAALFEQ
Sbjct: 61  RGVPVEVGGEAGYAVRNARHAELVEVPWKGATTMAALFEQ 100


>ref|XP_002532212.1| long-chain-fatty-acid CoA ligase, putative [Ricinus communis]
           gi|223528108|gb|EEF30181.1| long-chain-fatty-acid CoA
           ligase, putative [Ricinus communis]
          Length = 730

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 53/101 (52%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +2

Query: 53  MEDSEGNHLKSPLMGRSEIASYFSAFKENKSYGILGALFVSIVIP-LITTMFMSKKKPKQ 229
           M DSEG+    P+M     +   S  K   +YGILGA  V+I +P L++ +F+ +KK K+
Sbjct: 1   MSDSEGSFSSRPVMEVLGSSDQLSVEKGYGTYGILGAAIVAIFLPVLLSIVFLGRKKVKK 60

Query: 230 -RGVEAAVAGESGYAVRNARTAQLLEVPWEGADTMAALFEQ 349
            RGV   V GE+GYA+RNART  L+EVPWEGA TMAALFEQ
Sbjct: 61  VRGVPVEVGGEAGYAIRNARTPGLIEVPWEGATTMAALFEQ 101


>gb|ACF17664.1| putative long-chain acyl-CoA synthetase [Capsicum annuum]
          Length = 726

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 50/100 (50%), Positives = 70/100 (70%), Gaps = 1/100 (1%)
 Frame = +2

Query: 53  MEDSEGNHLKSPLMGRSEIASYFSAFKENKSYGILGALFVSIVIPLITTMF-MSKKKPKQ 229
           MEDSEG++  +  + R  + SY    K   S G+ GA+F++I++P+I +M  M KKK KQ
Sbjct: 1   MEDSEGSNPYTSSVER--LTSYDYISKNYGSSGVTGAVFIAIIMPIILSMLLMGKKKAKQ 58

Query: 230 RGVEAAVAGESGYAVRNARTAQLLEVPWEGADTMAALFEQ 349
           RGV   V GE+G A+RN ++A+L+EVPWEGA T+ ALFEQ
Sbjct: 59  RGVPVQVGGEAGLAMRNVKSARLVEVPWEGATTVPALFEQ 98


>gb|ADV16379.1| long-chain acyl-CoA synthetase 2 [Helianthus annuus]
          Length = 711

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
 Frame = +2

Query: 104 EIASYFSAFKENKSYGILGALFVSIVIPLI-TTMFMSKKKPKQRGVEAAVAGESGYAVRN 280
           ++    S F ++KSYG   A+  ++ +PL+ ++MF+ KKK KQRGV   V GE G+ +RN
Sbjct: 2   DVGGSLSTFMKDKSYGAAIAVLFAVAVPLVLSSMFVGKKKVKQRGVPVEVGGEPGFGMRN 61

Query: 281 ARTAQLLEVPWEGADTMAALFEQ 349
            R+ +L++VPWEGA TMAALFEQ
Sbjct: 62  VRSKKLVDVPWEGATTMAALFEQ 84


>ref|XP_003556895.1| PREDICTED: long chain acyl-CoA synthetase 8-like [Glycine max]
          Length = 725

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/100 (45%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
 Frame = +2

Query: 53  MEDSEGNHLKSPLMGRSEIASYFSAFKENKSYGILGALFVSIVIP-LITTMFMSKKKPKQ 229
           M+D +G+     ++  S+I  +    K++  YG L A+ +SI++P L + +F  KKK K 
Sbjct: 1   MDDPKGSSSWLKILNISDIFGW----KDHGEYGALAAIVISILVPVLFSALFFGKKKGKI 56

Query: 230 RGVEAAVAGESGYAVRNARTAQLLEVPWEGADTMAALFEQ 349
           RGV   V GE  +AVRNAR  +L+EVPW+GA TMA LFEQ
Sbjct: 57  RGVPVEVGGEECFAVRNARKTELVEVPWKGAPTMAHLFEQ 96


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