BLASTX nr result

ID: Bupleurum21_contig00024687 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024687
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]     72   4e-11
gb|EEE57703.1| hypothetical protein OsJ_08182 [Oryza sativa Japo...    69   5e-10
ref|XP_003567176.1| PREDICTED: uncharacterized protein LOC100842...    68   9e-10
gb|EAZ06296.1| hypothetical protein OsI_28531 [Oryza sativa Indi...    67   1e-09
gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japo...    67   2e-09

>gb|AAP45178.2| Zinc knuckle family protein [Solanum bulbocastanum]
          Length = 558

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = +1

Query: 7   KRNIWLCKNDLDRVQAKYRP-NCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFVRS 183
           K++I   KN+  R +A  +  NC W++YAS+   +  F IK    DH+C    ++K + S
Sbjct: 75  KKDIKFKKNESSRARAICKVLNCKWFIYASKANEDEPFMIKTIGPDHSCGNQRENKTIDS 134

Query: 184 DWLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLALSEI 333
           ++ ++K+ ++ + NP W ++EFQ HV   +   +S+   + AKK AL+ I
Sbjct: 135 EFSTKKYADEFKINPSWGVKEFQAHVMRKHSCTLSRYQSYRAKKKALNLI 184


>gb|EEE57703.1| hypothetical protein OsJ_08182 [Oryza sativa Japonica Group]
          Length = 894

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 35/109 (32%), Positives = 58/109 (53%), Gaps = 1/109 (0%)
 Frame = +1

Query: 10  RNIWLCKNDLDRVQAKYRP-NCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFVRSD 186
           R ++  KND ++V  K +  NCPWY+YAS+   E  F+IK+YV  HNC   H    +   
Sbjct: 292 REVFKGKNDRNQVSVKCKADNCPWYIYASKLPGEDTFKIKKYVSKHNCGKSHNIAQLYWR 351

Query: 187 WLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLALSEI 333
           WL+ ++    R++ KW    FQ  V     + +S +  + A++ A  ++
Sbjct: 352 WLTNEYMEFFRSDKKWDAHAFQDCVRRDTNIEVSISKAYRARREAYKKV 400


>ref|XP_003567176.1| PREDICTED: uncharacterized protein LOC100842953 [Brachypodium
           distachyon]
          Length = 853

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
 Frame = +1

Query: 1   VNKRNIWLCKNDLDRVQAKYR-PNCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFV 177
           V KR+I   K++ D+V+AK   P CPW +YA++      FQ+  Y+ +H+C     +K V
Sbjct: 376 VTKRSIVFLKSEEDKVRAKCGWPGCPWLIYAAKRSRCSRFQVITYMDEHHCAQNRDNKLV 435

Query: 178 RSDWLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLALSEINA 339
               +++++ N + ANP WK+   +  V +     ++ + C  AKK+ + ++ A
Sbjct: 436 TVKVIAKRYENFLMANPTWKIDSMKTTVLQEMFADVTSSKCKAAKKIVMEKMFA 489


>gb|EAZ06296.1| hypothetical protein OsI_28531 [Oryza sativa Indica Group]
          Length = 819

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   VNKRNIWLCKNDLDRVQAK-YRPNCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFV 177
           VN R+    +ND DRV+      +CP+Y+ AS+  NE    I+  VG H C        V
Sbjct: 379 VNCRDHMYLRNDSDRVKVCCVNDSCPFYMLASQIANEKTIAIRNMVGSHTCGTTMDSGRV 438

Query: 178 RSDWLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLA 321
            S+WLS+ +   IR++P WK+      +   YG+ ISK   + A+  A
Sbjct: 439 SSEWLSKVYEEDIRSDPNWKITSMMDAIMRKYGVDISKIMAYRARSKA 486



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   VNKRNIWLCKNDLDRVQAK-YRPNCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFV 177
           VN R+    +ND DRV+      +CP+Y+ AS+  NE    I+  VG H C        V
Sbjct: 132 VNCRDHMYLRNDSDRVKVCCVNDSCPFYMLASQIANEKTIAIRNMVGPHTCGTTMDSSRV 191

Query: 178 RSDWLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLA 321
            S+WL++ +   IR++P WK+      V   YG+ ISK   + A+  A
Sbjct: 192 SSEWLNKVYEEDIRSDPNWKITSMMDAVMRKYGVDISKIMAYRARSKA 239


>gb|EEE60251.1| hypothetical protein OsJ_13260 [Oryza sativa Japonica Group]
          Length = 974

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 39/110 (35%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +1

Query: 7   KRNIWLCKNDLDRVQAK-YRPNCPWYLYASRTENEGAFQIKRYVGDHNCVLIHKHKFVRS 183
           K NI   KND DR++A   R  C W L+AS       FQI  Y G+H+C    K+K + +
Sbjct: 208 KVNIKFIKNDRDRLRAVCMRKGCTWLLHASYNSRSDWFQIVTYNGNHSCCPDLKNKRLST 267

Query: 184 DWLSRKFGNQIRANPKWKLREFQHHVSELYGLIISKN*CWLAKKLALSEI 333
             +  K+ + I+ANP WK RE +  V E  G+ +S      AK   + ++
Sbjct: 268 SRICDKYESVIKANPSWKARELKETVQEEMGVDVSMTMVKRAKSRVIKKV 317


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