BLASTX nr result

ID: Bupleurum21_contig00024654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024654
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244...    78   9e-13
emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]    78   9e-13
ref|XP_002309642.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002531117.1| conserved hypothetical protein [Ricinus comm...    75   7e-12
ref|XP_002324875.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002284421.1| PREDICTED: uncharacterized protein LOC100244942 [Vitis vinifera]
          Length = 317

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
 Frame = -1

Query: 286 LLNKLMIPSAKPSAEILSAIPQISTENPLVKPAARANSSITESNSFSDQPYNNYHTQNSS 107
           +LNK+M PS+ P  E L   PQ+  E+PL+KP  +ANSSITESNS S+    N  +  S 
Sbjct: 70  ILNKVM-PSSPP--EFLPLRPQLQPESPLIKPT-KANSSITESNSLSET--YNPQSHGSP 123

Query: 106 PVDSLFDTVTSPDLSNM---NNQQVCVNHQTFVQNYD 5
           PVDS FDTVTSPDLSN+   ++  +   +Q FVQ Y+
Sbjct: 124 PVDSFFDTVTSPDLSNITLADSSNMAFVNQPFVQEYN 160


>emb|CAN80354.1| hypothetical protein VITISV_003142 [Vitis vinifera]
          Length = 347

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 49/97 (50%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
 Frame = -1

Query: 286 LLNKLMIPSAKPSAEILSAIPQISTENPLVKPAARANSSITESNSFSDQPYNNYHTQNSS 107
           +LNK+M PS+ P  E L   PQ+  E+PL+KP  +ANSSITESNS S+    N  +  S 
Sbjct: 100 ILNKVM-PSSPP--EFLPLRPQLQPESPLIKPT-KANSSITESNSLSET--YNPQSHGSP 153

Query: 106 PVDSLFDTVTSPDLSNM---NNQQVCVNHQTFVQNYD 5
           PVDS FDTVTSPDLSN+   ++  +   +Q FVQ Y+
Sbjct: 154 PVDSFFDTVTSPDLSNITLADSSNMAFVNQPFVQEYN 190


>ref|XP_002309642.1| predicted protein [Populus trichocarpa] gi|222855618|gb|EEE93165.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 45/93 (48%), Positives = 59/93 (63%)
 Frame = -1

Query: 289 NLLNKLMIPSAKPSAEILSAIPQISTENPLVKPAARANSSITESNSFSDQPYNNYHTQNS 110
           NLLNKL++ +     E+L  +PQ  + NPLV PA R NSSITESNS SD   +N+ +  S
Sbjct: 56  NLLNKLILSNP---TELLPFLPQAQSGNPLVIPA-RGNSSITESNSLSDT--HNHQSHGS 109

Query: 109 SPVDSLFDTVTSPDLSNMNNQQVCVNHQTFVQN 11
           SPVDS FD + SPD  + N ++   +H  FV N
Sbjct: 110 SPVDSFFDAIASPDFCSTNMEE--SSHMGFVSN 140


>ref|XP_002531117.1| conserved hypothetical protein [Ricinus communis]
           gi|223529313|gb|EEF31282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 316

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/96 (51%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
 Frame = -1

Query: 286 LLNKLMIPSAKPSAEILSAIPQISTENPLVKPAARANSSITESNSFSDQPYNNYHTQNSS 107
           LL+KLM  S   + E+   IPQ   E+PLV P  +ANSSITESNS SD    N+ +  SS
Sbjct: 70  LLSKLMPTS---TYELHPIIPQAQPESPLVLPM-KANSSITESNSLSDT--YNHQSHGSS 123

Query: 106 PVDSLFDTVTSPDLSNMN-NQQVCVN--HQTFVQNY 8
           PVDS FD VTSPD S++N     C+N  ++T+VQ Y
Sbjct: 124 PVDSFFDAVTSPDFSSINMADSSCINLVNKTYVQEY 159


>ref|XP_002324875.1| predicted protein [Populus trichocarpa] gi|222866309|gb|EEF03440.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
 Frame = -1

Query: 214 TENPLVKPAARANSSITESNSFSDQPYNNYHTQNSSPVDSLFDTVTSPDLSNMN---NQQ 44
           +ENPLV      NSSITESNS S+   +N+ +  SSPVD  FDT+TSPD SN N   +  
Sbjct: 55  SENPLVVSVI-GNSSITESNSLSET--HNHQSHGSSPVDPFFDTITSPDFSNNNLADSSH 111

Query: 43  VCVNHQTFVQNY 8
           + +   TFVQ Y
Sbjct: 112 MGLVSNTFVQEY 123


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