BLASTX nr result

ID: Bupleurum21_contig00024644 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024644
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   162   2e-38
ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago ...   159   3e-37
ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   156   1e-36
ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-...   153   2e-35
ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [...   152   2e-35

>ref|XP_002283711.2| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Vitis vinifera]
          Length = 3750

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/94 (80%), Positives = 86/94 (91%)
 Frame = +3

Query: 3    HGSLASYGKLMDHLVTSSYILVPFTKHLLTQPLVNGDIPLPRDAETFVKVLQSTTLKVVL 182
            +G LASYGKLMDHLVTSS+IL PFTKHLL QPL+NGDIP PRDAETFVKVLQS  LKVVL
Sbjct: 1258 YGPLASYGKLMDHLVTSSFILSPFTKHLLAQPLINGDIPFPRDAETFVKVLQSMVLKVVL 1317

Query: 183  PVWTHSQFTDCNHEFIASVVSIIRHIYSGVEVKN 284
            PVWT+ QFTDC+++FI +++SIIRHIYSGVEVKN
Sbjct: 1318 PVWTNPQFTDCSYDFITTIISIIRHIYSGVEVKN 1351


>ref|XP_003615335.1| E3 ubiquitin-protein ligase HUWE1 [Medicago truncatula]
            gi|355516670|gb|AES98293.1| E3 ubiquitin-protein ligase
            HUWE1 [Medicago truncatula]
          Length = 3655

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/94 (79%), Positives = 83/94 (88%)
 Frame = +3

Query: 3    HGSLASYGKLMDHLVTSSYILVPFTKHLLTQPLVNGDIPLPRDAETFVKVLQSTTLKVVL 182
            +GSLASYGKLMDHLVTSS+IL  FTKHLL QPL NGD P PRD ETF+KVLQST LK VL
Sbjct: 1197 YGSLASYGKLMDHLVTSSFILSSFTKHLLAQPLTNGDTPFPRDPETFMKVLQSTVLKTVL 1256

Query: 183  PVWTHSQFTDCNHEFIASVVSIIRHIYSGVEVKN 284
            PVWTH QF DC++EFI+SV+SIIRH+YSGVEVKN
Sbjct: 1257 PVWTHPQFGDCSYEFISSVISIIRHVYSGVEVKN 1290


>ref|XP_003518270.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3659

 Score =  156 bits (395), Expect = 1e-36
 Identities = 73/94 (77%), Positives = 83/94 (88%)
 Frame = +3

Query: 3    HGSLASYGKLMDHLVTSSYILVPFTKHLLTQPLVNGDIPLPRDAETFVKVLQSTTLKVVL 182
            +GSLASYGKLMDHLVTSS+IL  FTKHLL QPL NGD P PRDAETFVKVLQS  LK VL
Sbjct: 1191 YGSLASYGKLMDHLVTSSFILSSFTKHLLAQPLTNGDTPFPRDAETFVKVLQSRVLKTVL 1250

Query: 183  PVWTHSQFTDCNHEFIASVVSIIRHIYSGVEVKN 284
            PVWTH +F DC++EFI++V+SIIRH+Y+GVEVKN
Sbjct: 1251 PVWTHPKFVDCSYEFISTVISIIRHVYTGVEVKN 1284


>ref|XP_003544252.1| PREDICTED: E3 ubiquitin-protein ligase UPL2-like [Glycine max]
          Length = 3673

 Score =  153 bits (386), Expect = 2e-35
 Identities = 72/94 (76%), Positives = 82/94 (87%)
 Frame = +3

Query: 3    HGSLASYGKLMDHLVTSSYILVPFTKHLLTQPLVNGDIPLPRDAETFVKVLQSTTLKVVL 182
            +GSLASYGKLMDHLVTSS+IL  FTKHLL QPL NG+   PRDAETFVKVLQS  LK VL
Sbjct: 1215 YGSLASYGKLMDHLVTSSFILSSFTKHLLAQPLTNGNTAFPRDAETFVKVLQSRVLKTVL 1274

Query: 183  PVWTHSQFTDCNHEFIASVVSIIRHIYSGVEVKN 284
            PVWTH QF DC++EFI++V+SIIRH+Y+GVEVKN
Sbjct: 1275 PVWTHPQFVDCSYEFISTVISIIRHVYTGVEVKN 1308


>ref|XP_002527362.1| E3 ubiquitin protein ligase upl2, putative [Ricinus communis]
            gi|223533281|gb|EEF35034.1| E3 ubiquitin protein ligase
            upl2, putative [Ricinus communis]
          Length = 3666

 Score =  152 bits (385), Expect = 2e-35
 Identities = 73/94 (77%), Positives = 81/94 (86%)
 Frame = +3

Query: 3    HGSLASYGKLMDHLVTSSYILVPFTKHLLTQPLVNGDIPLPRDAETFVKVLQSTTLKVVL 182
            +G LASYGKLMDHLVTSS IL PFTKHLL QPL NG  P PRDAETFVKVLQS  LK VL
Sbjct: 1182 YGPLASYGKLMDHLVTSSLILSPFTKHLLAQPLGNGGSPFPRDAETFVKVLQSMVLKAVL 1241

Query: 183  PVWTHSQFTDCNHEFIASVVSIIRHIYSGVEVKN 284
            PVWTH Q TDC+++FI++V+SIIRH+YSGVEVKN
Sbjct: 1242 PVWTHPQLTDCSNDFISTVISIIRHVYSGVEVKN 1275


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