BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024640
         (1278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   315   2e-83
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   313   8e-83
ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   306   6e-81
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   306   6e-81
gb|ACT21194.1| zinc finger protein [Carica papaya]                    299   9e-79

>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
           predicted protein [Populus trichocarpa]
          Length = 323

 Score =  315 bits (806), Expect = 2e-83
 Identities = 165/296 (55%), Positives = 192/296 (64%), Gaps = 20/296 (6%)
 Frame = +1

Query: 94  MSTVDGSGATVPKQYFCHQCNRTVNITPSSASSELVCPNCNGGFLEEYES---------S 246
           MS+  G G  VP+ YFC+QC+RTV ITPS  +S+L CPNC  GFLEE ES         S
Sbjct: 1   MSSTGGVG--VPQLYFCYQCDRTVTITPSP-TSDLSCPNCQEGFLEECESPNPSSNPVDS 57

Query: 247 DFNPFLRTQNFFPL--------SSENLSGAANPNDLSTLFLGGGGGNRSETPDEFNPLSF 402
              P +    F  +         S N S   N +  S LF         + PD FNP +F
Sbjct: 58  GLGPAILLDEFASIFGGMAPTPRSSNNSTTTNSSSASPLF---------QDPDGFNPFAF 108

Query: 403 FMNYLNTLRAGGANIQFIVENNNAV---DDLGFRVPINLGDYVVGPGLEQLIQQLAENDP 573
             NYL T+RAGGANIQF++ENN+ +   D  GFR+P NLGDY +GPGLEQLIQQLAENDP
Sbjct: 109 LQNYLQTMRAGGANIQFVIENNSGMGGMDTTGFRLPANLGDYFIGPGLEQLIQQLAENDP 168

Query: 574 NRYGTPPAAKSAVEALPTVKITNELLECEFSQCAVCTDSFDLGEDAKQMPCKHIYHSDCI 753
           NRYGTPPA+KSAVE LP +K+T ELLE + SQCAVC DSF+LGE+AKQ+PCKHIYH DCI
Sbjct: 169 NRYGTPPASKSAVENLPDIKVTKELLESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCI 228

Query: 754 MPWLEMHNSCPVCRYELPTDDPDYENRKRXXXXXXXXXXXXXXXXXIMPQSSGGGT 921
            PWLE+HNSCPVCRYELPTDDPDYE RK                    P SSG G+
Sbjct: 229 TPWLELHNSCPVCRYELPTDDPDYEQRKGNGNDVVTPRDRRFRIAFQWPFSSGSGS 284


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  313 bits (801), Expect = 8e-83
 Identities = 173/326 (53%), Positives = 200/326 (61%), Gaps = 22/326 (6%)
 Frame = +1

Query: 94   MSTVDGSGATVPKQYFCHQCNRTVNITPSSASSELVCPNCNGGFLEEYES---------- 243
            MS+  G    V + YFC+QCNRTV ITP + +  L CPNC+ GFLEE +S          
Sbjct: 1    MSSTTGG---VSQLYFCYQCNRTVTITPPTTA--LSCPNCHEGFLEELDSPNPSPNPFDA 55

Query: 244  --------SDFNPFLRTQNFFPLSSENLSGAANPNDLSTLFLGGGGGNRSETPDEFNPLS 399
                     DF       N  P SS   + A N +  S LF         + PD FNP  
Sbjct: 56   GLGPALLLDDFASIFGGMNPTPRSSTTSTTATNSSSASPLF---------QDPDGFNPFV 106

Query: 400  FFMNYLNTLRAGGANIQFIVENN---NAVDDLGFRVPINLGDYVVGPGLEQLIQQLAEND 570
            F  NYL T+RAGGANIQF++ENN     +D  GFRVP NLGDY +GPGLEQLIQQLAEND
Sbjct: 107  FLQNYLQTMRAGGANIQFVIENNPGMGGMDPTGFRVPANLGDYFIGPGLEQLIQQLAEND 166

Query: 571  PNRYGTPPAAKSAVEALPTVKITNELLECEFSQCAVCTDSFDLGEDAKQMPCKHIYHSDC 750
            PNRYGTPPAAKSAVE LP VK+T EL++ + SQCAVC DSF+LGE AKQ+PCKHIYH DC
Sbjct: 167  PNRYGTPPAAKSAVENLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDC 226

Query: 751  IMPWLEMHNSCPVCRYELPTDDPDYENRKRXXXXXXXXXXXXXXXXXIMPQSSGGGTMAV 930
            IMPWLE+HNSCPVCRYELPTDD DYE RK                   + Q+ GGG  + 
Sbjct: 227  IMPWLELHNSCPVCRYELPTDDQDYEQRKGNGSNG-------------VNQNVGGGINSG 273

Query: 931  GIGRSLENVYNNPRT-MERRFRIQLP 1005
            G     +N   N +T  ERRFRI  P
Sbjct: 274  GSISDGDNSDGNAQTPRERRFRIPFP 299


>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
            vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
            ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
          Length = 369

 Score =  306 bits (785), Expect = 6e-81
 Identities = 164/317 (51%), Positives = 198/317 (62%), Gaps = 18/317 (5%)
 Frame = +1

Query: 109  GSGATVPKQYFCHQCNRTVNITPSSASSELVCPNCNGGFLEEYESSDFNP--------FL 264
            G G+  P+ YFC+QCN TV+ITPS  S  L CP+CN GFLEE E+ + NP        FL
Sbjct: 16   GGGSAAPQSYFCYQCNLTVSITPSPTSDPL-CPHCNDGFLEEVENPNPNPIPVPIPNPFL 74

Query: 265  RTQNFFPLSSENLSGAANPNDLSTLFLGGG---------GGNRSETPDEFNPLSFFMNYL 417
               +   LS+   +  A P  + +   GG           G     PD F+P +F  NYL
Sbjct: 75   GFSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYL 134

Query: 418  NTLRAGGANIQFIVENNNAVDDLGFRVPINLGDYVVGPGLEQLIQQLAENDPNRYGTPPA 597
             TLRAGG N+QF+++ N+      FR+  NLGDY +GPGLEQLIQQLAENDPNRYGTPPA
Sbjct: 135  QTLRAGGTNVQFVIDGNSPEGT--FRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPA 192

Query: 598  AKSAVEALPTVKITNELLECEFSQCAVCTDSFDLGEDAKQMPCKHIYHSDCIMPWLEMHN 777
            +KSA+E LPT++IT ELL  + SQCAVC DSF+L E+AKQMPCKHIYH+DCI+PWLE+HN
Sbjct: 193  SKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHN 252

Query: 778  SCPVCRYELPTDDPDYENRKRXXXXXXXXXXXXXXXXXIMPQSSGGGTMAVGIGRSLENV 957
            SCPVCRYELPTDDPDYE+R R                     +S  G  A G   S EN 
Sbjct: 253  SCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGA-AGGAAVSGENP 311

Query: 958  Y-NNPRTMERRFRIQLP 1005
                PRT +R FRI  P
Sbjct: 312  NPQTPRTADRMFRISFP 328


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  306 bits (785), Expect = 6e-81
 Identities = 164/317 (51%), Positives = 198/317 (62%), Gaps = 18/317 (5%)
 Frame = +1

Query: 109  GSGATVPKQYFCHQCNRTVNITPSSASSELVCPNCNGGFLEEYESSDFNP--------FL 264
            G G+  P+ YFC+QCN TV+ITPS  S  L CP+CN GFLEE E+ + NP        FL
Sbjct: 18   GGGSAAPQSYFCYQCNLTVSITPSPTSDPL-CPHCNDGFLEEVENPNPNPIPVPIPNPFL 76

Query: 265  RTQNFFPLSSENLSGAANPNDLSTLFLGGG---------GGNRSETPDEFNPLSFFMNYL 417
               +   LS+   +  A P  + +   GG           G     PD F+P +F  NYL
Sbjct: 77   GFSDLPSLSAAGATATAFPPLVFSTAAGGSIDLQNSVDFPGLFGADPDAFHPFAFLQNYL 136

Query: 418  NTLRAGGANIQFIVENNNAVDDLGFRVPINLGDYVVGPGLEQLIQQLAENDPNRYGTPPA 597
             TLRAGG N+QF+++ N+      FR+  NLGDY +GPGLEQLIQQLAENDPNRYGTPPA
Sbjct: 137  QTLRAGGTNVQFVIDGNSPEGT--FRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPA 194

Query: 598  AKSAVEALPTVKITNELLECEFSQCAVCTDSFDLGEDAKQMPCKHIYHSDCIMPWLEMHN 777
            +KSA+E LPT++IT ELL  + SQCAVC DSF+L E+AKQMPCKHIYH+DCI+PWLE+HN
Sbjct: 195  SKSAIEGLPTIRITVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHN 254

Query: 778  SCPVCRYELPTDDPDYENRKRXXXXXXXXXXXXXXXXXIMPQSSGGGTMAVGIGRSLENV 957
            SCPVCRYELPTDDPDYE+R R                     +S  G  A G   S EN 
Sbjct: 255  SCPVCRYELPTDDPDYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGA-AGGAAVSGENP 313

Query: 958  Y-NNPRTMERRFRIQLP 1005
                PRT +R FRI  P
Sbjct: 314  NPQTPRTADRMFRISFP 330


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  299 bits (766), Expect = 9e-79
 Identities = 166/310 (53%), Positives = 200/310 (64%), Gaps = 20/310 (6%)
 Frame = +1

Query: 136  YFCHQCNRTVNITPSSA-SSELVCPNCNGGFLEEYESSDFNPFLRTQNFFPLSSE----N 300
            YFC+QCNRTV I+PS   SS+L+CP CNGGFLEE E+   NP  +T N  P  S     +
Sbjct: 8    YFCYQCNRTVRISPSPCPSSDLLCPTCNGGFLEELENP--NPNQQTLNLNPFDSPFPFLS 65

Query: 301  LSGAANPNDLSTLFLGG-----GGGNRSETPDEFNPLSFFMNYLNTLRAGGANIQFIVEN 465
               + +P D  + F GG         R    + FNP  F  NYL TLRA GANIQF++EN
Sbjct: 66   SPNSPHPFDDLSAFFGGMVPPPSATARPNDTEVFNPFLFLQNYLQTLRANGANIQFVIEN 125

Query: 466  NN---AVDDLGFRVP--INLGDYVVGPGLEQLIQQLAENDPNRYGTPPAAKSAVEALPTV 630
            N+   +     FR+P  +NLGDY +GPGLEQLIQQLAENDPNR+GTPPA+KSA+EALPT+
Sbjct: 126  NSPGGSGPSGAFRLPGSLNLGDYFLGPGLEQLIQQLAENDPNRHGTPPASKSAIEALPTI 185

Query: 631  KITNELLECEFSQCAVCTDSFDLGEDAKQMPCKHIYHSDCIMPWLEMHNSCPVCRYELPT 810
            KI  E+ + + SQCAVC DSF L E+AKQMPCKHIYHS CI+PWLE+HNSCPVCRYELPT
Sbjct: 186  KIFQEMPDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCRYELPT 245

Query: 811  DDPDYENRKRXXXXXXXXXXXXXXXXXIMPQSSGGGTMAV-----GIGRSLENVYNNPRT 975
            DD DYE+R R                    Q+  G T AV     G   + +N    PR+
Sbjct: 246  DDADYEHRTRANRTP--------------AQNVSGSTDAVNAVADGNAGNRDNP-ETPRS 290

Query: 976  MERRFRIQLP 1005
            +ERRFRI LP
Sbjct: 291  VERRFRIFLP 300