BLASTX nr result

ID: Bupleurum21_contig00024628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024628
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK23942.1| unknown [Picea sitchensis] gi|116791290|gb|ABK259...    95   2e-17
gb|ABR17687.1| unknown [Picea sitchensis]                              94   3e-17
gb|ABK23343.1| unknown [Picea sitchensis]                              94   3e-17
ref|XP_002284445.1| PREDICTED: 60S ribosomal protein L23a isofor...    93   5e-17
gb|ABK26337.1| unknown [Picea sitchensis]                              93   7e-17

>gb|ABK23942.1| unknown [Picea sitchensis] gi|116791290|gb|ABK25923.1| unknown
           [Picea sitchensis] gi|148908514|gb|ABR17369.1| unknown
           [Picea sitchensis]
          Length = 154

 Score = 94.7 bits (234), Expect = 2e-17
 Identities = 52/118 (44%), Positives = 75/118 (63%), Gaps = 1/118 (0%)
 Frame = -2

Query: 351 LSVKDKTKESWKAATLSDKCDVATLKREPKEIPASAVISKQKATNM-RDSAIPFIVAPLR 175
           L+ K   K   + A  + K   ++LKR+ ++I  S +  + +     R+   P I AP R
Sbjct: 7   LAKKSDPKSQAQKAAKAVKAGASSLKRKSRKIRTSVIFHRPRTFKRPRNPKYPRISAPPR 66

Query: 174 NKLDQYQILMYPLVTESATKNMIENNTLVFLVDVRSDKASIKNAFEMICNIKTVKVNT 1
           NKLDQY++L YPL TESA K + +NNTLVF+VDVR+DK  IK+A + + +I+T KVNT
Sbjct: 67  NKLDQYEVLKYPLTTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNT 124


>gb|ABR17687.1| unknown [Picea sitchensis]
          Length = 154

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 KDKTKESWKAATLSDKCDVATLKREPKEIPASAVISKQKATNM-RDSAIPFIVAPLRNKL 166
           K   K   + A  + K   +TLKR+ ++I  S +  + +     R+   P I AP RNKL
Sbjct: 10  KTDPKGQAQKAAKAVKAGASTLKRKSRKIRTSVIFHRPRTFKRPRNPKYPRISAPPRNKL 69

Query: 165 DQYQILMYPLVTESATKNMIENNTLVFLVDVRSDKASIKNAFEMICNIKTVKVNT 1
           DQY++L YPL TESA K + +NNTLVF+VDVR+DK  IK+A + + +I+T KVNT
Sbjct: 70  DQYEVLKYPLTTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNT 124


>gb|ABK23343.1| unknown [Picea sitchensis]
          Length = 154

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 52/115 (45%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 KDKTKESWKAATLSDKCDVATLKREPKEIPASAVISKQKATNM-RDSAIPFIVAPLRNKL 166
           K   K   + A  + K   +TLKR+ ++I  S +  + +     R+   P I AP RNKL
Sbjct: 10  KTDPKGQAQKAAKAVKAGASTLKRKSRKIRTSVIFHRPRTFKRPRNPKYPRISAPPRNKL 69

Query: 165 DQYQILMYPLVTESATKNMIENNTLVFLVDVRSDKASIKNAFEMICNIKTVKVNT 1
           DQY++L YPL TESA K + +NNTLVF+VDVR+DK  IK+A + + +I+T KVNT
Sbjct: 70  DQYEVLKYPLTTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNT 124


>ref|XP_002284445.1| PREDICTED: 60S ribosomal protein L23a isoform 1 [Vitis vinifera]
           gi|297746139|emb|CBI16195.3| unnamed protein product
           [Vitis vinifera]
          Length = 155

 Score = 93.2 bits (230), Expect = 5e-17
 Identities = 54/121 (44%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = -2

Query: 360 EASLSVKDKTKESWKAATLSDKCDVATLKREPKEIPASAVISKQKATNM-RDSAIPFIVA 184
           +A  S K   K     A  + K   +T K++ K+I  S    + K     R+   P I A
Sbjct: 5   KADSSKKADPKAQAAKAAKAVKLGASTFKKKAKKIRTSVTFHRPKTLKKERNPKYPRISA 64

Query: 183 PLRNKLDQYQILMYPLVTESATKNMIENNTLVFLVDVRSDKASIKNAFEMICNIKTVKVN 4
           P RNKLDQYQIL YPL TESA K + +NNTLVF+VD+R++K  IK+A + + +I+T KVN
Sbjct: 65  PSRNKLDQYQILKYPLTTESAMKKIEDNNTLVFIVDIRANKKKIKDAVKKMYDIQTKKVN 124

Query: 3   T 1
           T
Sbjct: 125 T 125


>gb|ABK26337.1| unknown [Picea sitchensis]
          Length = 168

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 1/115 (0%)
 Frame = -2

Query: 342 KDKTKESWKAATLSDKCDVATLKREPKEIPASAVISKQKATNM-RDSAIPFIVAPLRNKL 166
           K   K   + A  + +   +TLKR+ ++I  S +  + +     R+   P I AP RNKL
Sbjct: 10  KTDPKGQAQKAAKAVRAGASTLKRKTRKIRTSVIFHRPRTFKRPRNPKYPRISAPPRNKL 69

Query: 165 DQYQILMYPLVTESATKNMIENNTLVFLVDVRSDKASIKNAFEMICNIKTVKVNT 1
           DQY++L YPL TESA K + +NNTLVF+VDVR+DK  IK+A + + +I+T KVNT
Sbjct: 70  DQYEVLKYPLTTESAMKKIEDNNTLVFIVDVRADKKKIKDAVKKMYDIQTKKVNT 124


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