BLASTX nr result

ID: Bupleurum21_contig00024619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024619
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NF...   188   4e-46
ref|XP_003600910.1| NF-X1-type zinc finger protein NFXL1 [Medica...   188   4e-46
ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NF...   187   1e-45
emb|CAN64083.1| hypothetical protein VITISV_006934 [Vitis vinifera]   187   1e-45
ref|XP_002533384.1| nuclear transcription factor, X-box binding,...   184   6e-45

>ref|XP_003552843.1| PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Glycine max]
          Length = 877

 Score =  188 bits (477), Expect = 4e-46
 Identities = 83/131 (63%), Positives = 94/131 (71%)
 Frame = -3

Query: 393 FLTSSRAGALSCLICLERIKPTDPTWSCTSRCFAVFHLICIQSWARQXXXXXXXXXXXXX 214
           FLTSS AGALSCLICLERIKP+D TWSC+S CFAVFHL CIQSWARQ             
Sbjct: 75  FLTSSSAGALSCLICLERIKPSDATWSCSSLCFAVFHLFCIQSWARQASDLAAARAVTRL 134

Query: 213 XXXXXXXXXXVHSIWNCPKCRTEYPKTLIPKTYYCFCGKVENPGRDPWVLPHSCGEICER 34
                       ++WNCPKCR+EY K+ IPKTY+CFCGK+ENP  DPW+LPHSCGE+C R
Sbjct: 135 SISSASASDT--ALWNCPKCRSEYNKSHIPKTYFCFCGKIENPPNDPWILPHSCGEVCGR 192

Query: 33  DLQDKCGHHCL 1
            L+  CGHHCL
Sbjct: 193 QLKHNCGHHCL 203


>ref|XP_003600910.1| NF-X1-type zinc finger protein NFXL1 [Medicago truncatula]
           gi|355489958|gb|AES71161.1| NF-X1-type zinc finger
           protein NFXL1 [Medicago truncatula]
          Length = 878

 Score =  188 bits (477), Expect = 4e-46
 Identities = 85/132 (64%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 FLTSSRAGALSCLICLERIKPTDPTWSCTSRCFAVFHLICIQSWARQXXXXXXXXXXXXX 214
           FLTSS +GALSCLICLERIKP+DPTWSCTS CFAVFHL CIQSW+RQ             
Sbjct: 66  FLTSSSSGALSCLICLERIKPSDPTWSCTSLCFAVFHLFCIQSWSRQASDLAASRAVTRL 125

Query: 213 XXXXXXXXXXVHSIWNCPKCRTEYPKTLIPKTYYCFCGKVEN-PGRDPWVLPHSCGEICE 37
                       S+WNCPKCR EYPK+LIPK Y+CFCGK+EN P  DPWVLPHSCGE+C 
Sbjct: 126 SVSAEHAAET--SLWNCPKCRVEYPKSLIPKIYFCFCGKLENPPSDDPWVLPHSCGEVCG 183

Query: 36  RDLQDKCGHHCL 1
           R L++ CGH+CL
Sbjct: 184 RSLKNDCGHYCL 195


>ref|XP_002271239.1| PREDICTED: NF-X1-type zinc finger protein NFXL2 [Vitis vinifera]
          Length = 875

 Score =  187 bits (474), Expect = 1e-45
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
 Frame = -3

Query: 393 FLTSSRAGALSCLICLERIKPTDPTWSCTSRCFAVFHLICIQSWARQXXXXXXXXXXXXX 214
           FLTSSR+GALSCLICLERI+P+DPTWSCTS CFAVFHLICIQSWARQ             
Sbjct: 61  FLTSSRSGALSCLICLERIRPSDPTWSCTSGCFAVFHLICIQSWARQASDLSASRATARL 120

Query: 213 XXXXXXXXXXV---HSIWNCPKCRTEYPKTLIPKTYYCFCGKVENPGRDPWVLPHSCGEI 43
                          + W+CPKCR EY K LIPK Y+CFCGK+++P RDPW+LPHSCGEI
Sbjct: 121 SADLFPAAAAKAIEDAAWHCPKCRFEYSKALIPKAYFCFCGKLQDPPRDPWILPHSCGEI 180

Query: 42  CERDLQDKCGHHCL 1
           C R L++ CGH+CL
Sbjct: 181 CNRPLKNNCGHYCL 194


>emb|CAN64083.1| hypothetical protein VITISV_006934 [Vitis vinifera]
          Length = 797

 Score =  187 bits (474), Expect = 1e-45
 Identities = 83/134 (61%), Positives = 96/134 (71%), Gaps = 3/134 (2%)
 Frame = -3

Query: 393 FLTSSRAGALSCLICLERIKPTDPTWSCTSRCFAVFHLICIQSWARQXXXXXXXXXXXXX 214
           FLTSSR+GALSCLICLERI+P+DPTWSCTS CFAVFHLICIQSWARQ             
Sbjct: 61  FLTSSRSGALSCLICLERIRPSDPTWSCTSGCFAVFHLICIQSWARQASDLSASRATARL 120

Query: 213 XXXXXXXXXXV---HSIWNCPKCRTEYPKTLIPKTYYCFCGKVENPGRDPWVLPHSCGEI 43
                          + W+CPKCR EY K LIPK Y+CFCGK+++P RDPW+LPHSCGEI
Sbjct: 121 SADLFPAAAAKAIEDAAWHCPKCRFEYSKALIPKAYFCFCGKLQDPPRDPWILPHSCGEI 180

Query: 42  CERDLQDKCGHHCL 1
           C R L++ CGH+CL
Sbjct: 181 CNRPLKNNCGHYCL 194


>ref|XP_002533384.1| nuclear transcription factor, X-box binding, putative [Ricinus
           communis] gi|223526777|gb|EEF29002.1| nuclear
           transcription factor, X-box binding, putative [Ricinus
           communis]
          Length = 875

 Score =  184 bits (467), Expect = 6e-45
 Identities = 82/132 (62%), Positives = 96/132 (72%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 FLTSSRAGALSCLICLERIKPTDPTWSCTSRCFAVFHLICIQSWARQXXXXXXXXXXXXX 214
           FLTSS +GALSCLICLERIKP+DPTWSC+S C+AVFHL+CIQSWA+Q             
Sbjct: 64  FLTSSSSGALSCLICLERIKPSDPTWSCSSLCYAVFHLLCIQSWAQQSSNLSAYRASTRL 123

Query: 213 XXXXXXXXXXVHSIWNCPKCRTEYPKTLIPKTYYCFCGKVENPGRD-PWVLPHSCGEICE 37
                       + WNCPKCR+ Y K+LIPKTY+CFCGK+ENP  D PW+LPHSCGEIC 
Sbjct: 124 PISPERAAET--ATWNCPKCRSVYTKSLIPKTYFCFCGKIENPPHDNPWILPHSCGEICN 181

Query: 36  RDLQDKCGHHCL 1
           R L++ CGHHCL
Sbjct: 182 RPLKNNCGHHCL 193


Top