BLASTX nr result

ID: Bupleurum21_contig00024618 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024618
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containi...    68   9e-10
emb|CBI26569.3| unnamed protein product [Vitis vinifera]               68   9e-10
ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat...    67   2e-09
ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat...    67   2e-09
ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containi...    67   2e-09

>ref|XP_002275213.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Vitis vinifera]
          Length = 494

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = +3

Query: 3   MKAFMRSKKFKQVPLIYREMESAGCTPDRKARELLQTAIMSLEQ 134
           MKA +R++KF +VP IY EMESAGCTPDRKARE+LQTA++ L+Q
Sbjct: 415 MKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQ 458


>emb|CBI26569.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = +3

Query: 3   MKAFMRSKKFKQVPLIYREMESAGCTPDRKARELLQTAIMSLEQ 134
           MKA +R++KF +VP IY EMESAGCTPDRKARE+LQTA++ L+Q
Sbjct: 336 MKACIRARKFDKVPEIYEEMESAGCTPDRKAREMLQTALLVLQQ 379


>ref|XP_004164250.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 433

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   MKAFMRSKKFKQVPLIYREMESAGCTPDRKARELLQTAIMSLEQ 134
           MKAF+R+KKF +VP IY+EMESAGCTPDRKARE+L++    LEQ
Sbjct: 339 MKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQ 382


>ref|XP_004146932.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g36300-like [Cucumis sativus]
          Length = 455

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +3

Query: 3   MKAFMRSKKFKQVPLIYREMESAGCTPDRKARELLQTAIMSLEQ 134
           MKAF+R+KKF +VP IY+EMESAGCTPDRKARE+L++    LEQ
Sbjct: 339 MKAFIRAKKFAKVPEIYKEMESAGCTPDRKAREMLKSVTAILEQ 382


>ref|XP_003538664.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Glycine max]
          Length = 881

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/47 (59%), Positives = 40/47 (85%)
 Frame = +3

Query: 3   MKAFMRSKKFKQVPLIYREMESAGCTPDRKARELLQTAIMSLEQPRI 143
           MKAF+R+KKF +VP+IY+EME+ GCTPDRKAR++LQ A+  ++  R+
Sbjct: 476 MKAFIRAKKFDEVPIIYKEMENDGCTPDRKARQMLQVALTLIDHDRL 522


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