BLASTX nr result

ID: Bupleurum21_contig00024614 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024614
         (1358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   745   0.0  
ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   733   0.0  
ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicag...   708   0.0  
ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   692   0.0  
ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   692   0.0  

>ref|XP_002282504.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13 [Vitis vinifera]
            gi|296083755|emb|CBI23744.3| unnamed protein product
            [Vitis vinifera]
          Length = 788

 Score =  745 bits (1923), Expect = 0.0
 Identities = 380/454 (83%), Positives = 415/454 (91%), Gaps = 2/454 (0%)
 Frame = -1

Query: 1358 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKADNISTENGD 1179
            FK+PTPIQKACIPAAAHQGKDV+GA+ETGSGKTLA GLPILQRLLEEREKA     EN +
Sbjct: 175  FKQPTPIQKACIPAAAHQGKDVVGASETGSGKTLALGLPILQRLLEEREKAAEPLAENSE 234

Query: 1178 VDPKIASRGLMRALIITPTRELALQVHDHLKKVAKDTNIRVVPIVGGMSTEKQERLLKAR 999
               K A  G++RALIITPTRELALQV DHLK+VAK TN+RVVPIVGGMSTEKQERLLKAR
Sbjct: 235  --EKYAEGGILRALIITPTRELALQVTDHLKEVAKGTNVRVVPIVGGMSTEKQERLLKAR 292

Query: 998  PEIVVGTPGRLWELMSGGEIHLVEMHSLSFFVLDEADRMIENGHFHELQSIIDMLPVTSG 819
            PEIVVGTPGRLWELMS GE HLVE+HSLSFFVLDEADRM+ENGHFHELQSIID+LP TSG
Sbjct: 293  PEIVVGTPGRLWELMSRGEDHLVELHSLSFFVLDEADRMVENGHFHELQSIIDILPKTSG 352

Query: 818  SVEGRPSHTQGCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGSVKSKP--SDDLNSI 645
            S+E    +T+ C TVS+ QRKKRQT VFSATIALSADFRKKLKRG+++SK   +D LNSI
Sbjct: 353  SMESLSQNTENCFTVSNIQRKKRQTFVFSATIALSADFRKKLKRGALRSKQLMNDGLNSI 412

Query: 644  ENLSERAGMRPNAAIFDLTNASIVANRLEESFIECREEDKDAYLYYILAVHGQGQTIVFC 465
            E LSERAGMRPNAAI DLTNASI+AN+LEESFIECREEDKDAYLYYIL+VHGQG+TIVFC
Sbjct: 413  ETLSERAGMRPNAAIVDLTNASIMANKLEESFIECREEDKDAYLYYILSVHGQGRTIVFC 472

Query: 464  TSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFRGNKDGILVATDVAARGLDIP 285
            TSIAALRH SSLLRILGINVWTLHAQMQQRARLKAIDRFRGN+ GILVATDVAARGLDIP
Sbjct: 473  TSIAALRHTSSLLRILGINVWTLHAQMQQRARLKAIDRFRGNEHGILVATDVAARGLDIP 532

Query: 284  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNETSKFASMCKSFSKESFKQF 105
            GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSI LISPN+ SKFA++CKSFSKESF++F
Sbjct: 533  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALISPNDRSKFANLCKSFSKESFQRF 592

Query: 104  PVEPSYMPEVLKRMSIARQIDKVMRKESQEKASK 3
            P+E SYMPEV+KR+S+ARQIDK+ RK+SQEKA K
Sbjct: 593  PIESSYMPEVVKRLSLARQIDKISRKDSQEKAKK 626


>ref|XP_003528870.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Glycine max]
          Length = 810

 Score =  733 bits (1893), Expect = 0.0
 Identities = 372/454 (81%), Positives = 408/454 (89%), Gaps = 2/454 (0%)
 Frame = -1

Query: 1358 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKADNISTENGD 1179
            FKEPTPIQKACIPAAAHQGKDV+GAAETGSGKTLAFGLPILQRLLEEREKA N+  E G+
Sbjct: 195  FKEPTPIQKACIPAAAHQGKDVVGAAETGSGKTLAFGLPILQRLLEEREKAGNMVGERGE 254

Query: 1178 VDPKIASRGLMRALIITPTRELALQVHDHLKKVAKDTNIRVVPIVGGMSTEKQERLLKAR 999
               K AS GL+RALII PTRELALQV DHLK VAK  N+RV PIVGG+  EKQERLLKA+
Sbjct: 255  EPEKYASTGLLRALIIAPTRELALQVTDHLKAVAKHINVRVTPIVGGILAEKQERLLKAK 314

Query: 998  PEIVVGTPGRLWELMSGGEIHLVEMHSLSFFVLDEADRMIENGHFHELQSIIDMLPVTSG 819
            PEIVVGTPGRLWELMS GE HLVE+HSLSFFVLDEADRM++NGHF ELQSIIDMLP+++ 
Sbjct: 315  PEIVVGTPGRLWELMSAGEKHLVELHSLSFFVLDEADRMVQNGHFKELQSIIDMLPMSNN 374

Query: 818  SVEGRPSHTQGCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGSVKSKPS--DDLNSI 645
            S E    H Q CVTVSS+QRKKRQTLVFSAT+ALS+DFRKKLKRGS+K K S  D LNSI
Sbjct: 375  SAEDNSQHVQSCVTVSSYQRKKRQTLVFSATVALSSDFRKKLKRGSIKQKQSLTDGLNSI 434

Query: 644  ENLSERAGMRPNAAIFDLTNASIVANRLEESFIECREEDKDAYLYYILAVHGQGQTIVFC 465
            E LSERAGMR NAAI DLTN SI+A +LEESFIECREEDKDAYLYYIL VHGQG+TIVFC
Sbjct: 435  ETLSERAGMRSNAAIIDLTNPSILATKLEESFIECREEDKDAYLYYILTVHGQGRTIVFC 494

Query: 464  TSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFRGNKDGILVATDVAARGLDIP 285
            TSIAALRHISS+LRILGINVWTLHAQMQQRARLKA+DRFR N++GILVATDVAARGLDIP
Sbjct: 495  TSIAALRHISSILRILGINVWTLHAQMQQRARLKAMDRFRENENGILVATDVAARGLDIP 554

Query: 284  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNETSKFASMCKSFSKESFKQF 105
            GVRTVVHYQLPHSAEVYVHRSGRTARASA+GCSI LIS  +TSKFAS+CKSFSK++F++F
Sbjct: 555  GVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISSRDTSKFASLCKSFSKDNFQRF 614

Query: 104  PVEPSYMPEVLKRMSIARQIDKVMRKESQEKASK 3
            P+E SYMPEVLKR+S+ARQIDK+ RK+SQEKA K
Sbjct: 615  PLENSYMPEVLKRLSLARQIDKITRKDSQEKAEK 648


>ref|XP_003622915.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355497930|gb|AES79133.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 798

 Score =  708 bits (1828), Expect = 0.0
 Identities = 362/455 (79%), Positives = 405/455 (89%), Gaps = 3/455 (0%)
 Frame = -1

Query: 1358 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKADNISTENGD 1179
            FKEPTPIQKAC+PAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKA++IS  NG+
Sbjct: 182  FKEPTPIQKACVPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKAESISGVNGE 241

Query: 1178 -VDPKIASRGLMRALIITPTRELALQVHDHLKKVAKDTNIRVVPIVGGMSTEKQERLLKA 1002
                K A+ GL+R+LII PTRELALQV  HLK VAK  N+RV  IVGG+  EKQERLLKA
Sbjct: 242  EAAEKYATTGLLRSLIIAPTRELALQVAKHLKAVAKHINVRVTAIVGGILPEKQERLLKA 301

Query: 1001 RPEIVVGTPGRLWELMSGGEIHLVEMHSLSFFVLDEADRMIENGHFHELQSIIDMLPVTS 822
            RPEIVV TPGRLWELMS GE HL+E+HSLSFFVLDEADRM+++GHF ELQSIIDMLP+++
Sbjct: 302  RPEIVVATPGRLWELMSSGEKHLIELHSLSFFVLDEADRMVQSGHFKELQSIIDMLPMSN 361

Query: 821  GSVEGRPSHTQGCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGSVKSKP--SDDLNS 648
             S E      Q CVTVSS Q+KKRQTLVFSAT+ALSADFRKKLKRGS++ K   +D L+S
Sbjct: 362  ISSEDNSKDAQNCVTVSSIQKKKRQTLVFSATVALSADFRKKLKRGSIQKKQLSTDGLDS 421

Query: 647  IENLSERAGMRPNAAIFDLTNASIVANRLEESFIECREEDKDAYLYYILAVHGQGQTIVF 468
            IE LSERAGMRPNAAI DLTN SI+A ++EESFIEC E+DKDA+LYYIL VHGQG+TIVF
Sbjct: 422  IETLSERAGMRPNAAIIDLTNPSILAAKIEESFIECTEDDKDAHLYYILTVHGQGRTIVF 481

Query: 467  CTSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFRGNKDGILVATDVAARGLDI 288
            CTSIAALRHISS+LRILG+NVWTLHAQMQQRARLKA+DRFR N +GILVATDVAARGLDI
Sbjct: 482  CTSIAALRHISSILRILGVNVWTLHAQMQQRARLKAMDRFRENDNGILVATDVAARGLDI 541

Query: 287  PGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNETSKFASMCKSFSKESFKQ 108
            PGVRTVVHYQLPHSAEVYVHRSGRTARASA+GCSI LISP ETSKFAS+CKSFSK++F++
Sbjct: 542  PGVRTVVHYQLPHSAEVYVHRSGRTARASAEGCSIALISPKETSKFASLCKSFSKDNFQR 601

Query: 107  FPVEPSYMPEVLKRMSIARQIDKVMRKESQEKASK 3
            FPVE SYMPEVLKR+S+ARQIDK+ RK+SQEKA K
Sbjct: 602  FPVENSYMPEVLKRLSLARQIDKITRKDSQEKAEK 636


>ref|XP_004163501.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like, partial
            [Cucumis sativus]
          Length = 784

 Score =  692 bits (1787), Expect = 0.0
 Identities = 357/454 (78%), Positives = 401/454 (88%), Gaps = 2/454 (0%)
 Frame = -1

Query: 1358 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKADNISTENGD 1179
            FKEPT IQKACIPAAA+QGKDV+GAAETGSGKTLAFGLPILQR L+EREK+  +S E G 
Sbjct: 216  FKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGV 275

Query: 1178 VDPKIASRGLMRALIITPTRELALQVHDHLKKVAKDTNIRVVPIVGGMSTEKQERLLKAR 999
               K A + L+RALIITPTRELALQV DHLK VA   +IRVVPIVGGMSTEKQERLL+ R
Sbjct: 276  DAKKYAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTR 335

Query: 998  PEIVVGTPGRLWELMSGGEIHLVEMHSLSFFVLDEADRMIENGHFHELQSIIDMLPVTSG 819
            PE+VVGTPGRLWELMSGGE HLVE+ +LSFFVLDEADRMIENGHF ELQSIIDMLPVT+G
Sbjct: 336  PEVVVGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNG 395

Query: 818  SVEGRPSHTQGCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGSVKSKPS--DDLNSI 645
            S E    + +  +T    QRKKRQTLVFSAT++LS+DFRKKLKR S K   S  D LNSI
Sbjct: 396  SAENL-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSI 454

Query: 644  ENLSERAGMRPNAAIFDLTNASIVANRLEESFIECREEDKDAYLYYILAVHGQGQTIVFC 465
            E LSERAG+RPN A+ +LTN S++AN LEESFIECREEDKDAYLYYIL+V+GQG+TIVFC
Sbjct: 455  EALSERAGIRPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFC 514

Query: 464  TSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFRGNKDGILVATDVAARGLDIP 285
            TSIAALRHI++LL I+G+NV TLHAQ QQRARLKAIDRFRG+++GIL+ATDVAARGLDIP
Sbjct: 515  TSIAALRHIAALLSIVGVNVLTLHAQRQQRARLKAIDRFRGSQNGILIATDVAARGLDIP 574

Query: 284  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNETSKFASMCKSFSKESFKQF 105
            GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSI L+S NETSKFAS+CKSFSKESF++F
Sbjct: 575  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFASLCKSFSKESFQRF 634

Query: 104  PVEPSYMPEVLKRMSIARQIDKVMRKESQEKASK 3
            PV+ SYMPEVLKR+S+ARQIDK++RKESQEKASK
Sbjct: 635  PVDNSYMPEVLKRLSLARQIDKIVRKESQEKASK 668


>ref|XP_004147170.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 13-like [Cucumis
            sativus]
          Length = 848

 Score =  692 bits (1787), Expect = 0.0
 Identities = 357/454 (78%), Positives = 401/454 (88%), Gaps = 2/454 (0%)
 Frame = -1

Query: 1358 FKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLEEREKADNISTENGD 1179
            FKEPT IQKACIPAAA+QGKDV+GAAETGSGKTLAFGLPILQR L+EREK+  +S E G 
Sbjct: 236  FKEPTAIQKACIPAAAYQGKDVVGAAETGSGKTLAFGLPILQRFLDEREKSGKMSEEKGV 295

Query: 1178 VDPKIASRGLMRALIITPTRELALQVHDHLKKVAKDTNIRVVPIVGGMSTEKQERLLKAR 999
               K A + L+RALIITPTRELALQV DHLK VA   +IRVVPIVGGMSTEKQERLL+ R
Sbjct: 296  DAKKYAPKSLLRALIITPTRELALQVTDHLKAVAVGIDIRVVPIVGGMSTEKQERLLRTR 355

Query: 998  PEIVVGTPGRLWELMSGGEIHLVEMHSLSFFVLDEADRMIENGHFHELQSIIDMLPVTSG 819
            PE+VVGTPGRLWELMSGGE HLVE+ +LSFFVLDEADRMIENGHF ELQSIIDMLPVT+G
Sbjct: 356  PEVVVGTPGRLWELMSGGEKHLVELEALSFFVLDEADRMIENGHFRELQSIIDMLPVTNG 415

Query: 818  SVEGRPSHTQGCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGSVKSKPS--DDLNSI 645
            S E    + +  +T    QRKKRQTLVFSAT++LS+DFRKKLKR S K   S  D LNSI
Sbjct: 416  SAENL-QNAENSLTTPISQRKKRQTLVFSATLSLSSDFRKKLKRVSSKPNQSGMDGLNSI 474

Query: 644  ENLSERAGMRPNAAIFDLTNASIVANRLEESFIECREEDKDAYLYYILAVHGQGQTIVFC 465
            E LSERAG+RPN A+ +LTN S++AN LEESFIECREEDKDAYLYYIL+V+GQG+TIVFC
Sbjct: 475  EALSERAGIRPNVAVINLTNTSVLANNLEESFIECREEDKDAYLYYILSVYGQGRTIVFC 534

Query: 464  TSIAALRHISSLLRILGINVWTLHAQMQQRARLKAIDRFRGNKDGILVATDVAARGLDIP 285
            TSIAALRHI++LL I+G+NV TLHAQ QQRARLKAIDRFRG+++GIL+ATDVAARGLDIP
Sbjct: 535  TSIAALRHIAALLSIVGVNVLTLHAQRQQRARLKAIDRFRGSQNGILIATDVAARGLDIP 594

Query: 284  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNETSKFASMCKSFSKESFKQF 105
            GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSI L+S NETSKFAS+CKSFSKESF++F
Sbjct: 595  GVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIALVSANETSKFASLCKSFSKESFQRF 654

Query: 104  PVEPSYMPEVLKRMSIARQIDKVMRKESQEKASK 3
            PV+ SYMPEVLKR+S+ARQIDK++RKESQEKASK
Sbjct: 655  PVDNSYMPEVLKRLSLARQIDKIVRKESQEKASK 688


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