BLASTX nr result

ID: Bupleurum21_contig00024611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024611
         (1283 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vi...   154   5e-35
ref|XP_002511661.1| hypothetical protein RCOM_1610560 [Ricinus c...   131   3e-28
emb|CBI38908.3| unnamed protein product [Vitis vinifera]              114   7e-23
gb|ACV95482.1| SCL6 [Citrus trifoliata]                                99   3e-18
ref|XP_003516440.1| PREDICTED: scarecrow-like protein 6-like [Gl...    97   1e-17

>ref|XP_002274837.1| PREDICTED: scarecrow-like protein 6-like [Vitis vinifera]
          Length = 804

 Score =  154 bits (389), Expect = 5e-35
 Identities = 144/437 (32%), Positives = 180/437 (41%), Gaps = 42/437 (9%)
 Frame = -3

Query: 1188 MKDMHLPFDFQGKWGLDFLVFKEFTCSSSLSDPYFQKLEEHTQNTLVEPTSVLENIXXXX 1009
            MKDM LP + +GK   +        C +SL + + ++ EE       EPTSVL+      
Sbjct: 55   MKDMPLPLELEGKGVFEI-------CLNSLLEKWNKEEEEGGCCVGTEPTSVLDT----- 102

Query: 1008 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVAAVSGNPSSKW--AQHEANNVVVGQQ 835
                                             VAAVSGNPS KW  AQ +  +   G +
Sbjct: 103  -------RRSPSPPTSTSTLSSSCGGGGSDTAGVAAVSGNPSQKWPPAQPDTTSSNAGVE 155

Query: 834  SQEISGGGDSHRSIEKCGLEMEDWESVLXXXXXXXXXXXXSVLGWIMGDVEDPSLGLNKV 655
               I    D     EKCGL MEDWESVL             +L WIMGDVEDPS+GLNK+
Sbjct: 156  LHPIPASVDLGAG-EKCGLGMEDWESVLSETAASPSQEQS-ILRWIMGDVEDPSVGLNKL 213

Query: 654  LQIGSG---DFDYNVGFGGMNQGFGLDNSSTIGSSS-------------------AHLMP 541
            LQ G G   DF+++ GFG ++QGFG +     GSS                      + P
Sbjct: 214  LQSGGGGPPDFEFSSGFGVVDQGFGFEPCLGSGSSMNAPCPGFPPTSNSVNSINHGRIGP 273

Query: 540  TSFPQKLAPNFT--NSQS-PVFSPLGNNAAASNETGSISANXXXXXQ-----------IY 403
             S P +  PNF   N QS P F+  GNN         IS N     Q           I 
Sbjct: 274  VSNPNQ--PNFKIHNPQSNPNFAKSGNNLMP------ISFNQQQLQQQPFEALDEKPQIL 325

Query: 402  NPQMLINQHQAQQTQNPAFFLPVSYNDTQQNQHLFVPPHPKRLNSGXXXXXXXXXXXXXX 223
             PQ+LINQHQAQ TQNPAFFLP+ Y   QQ Q+L +PP  KR N+G              
Sbjct: 326  IPQVLINQHQAQHTQNPAFFLPLPY--AQQEQNLLLPPQAKRHNTGPIGSIEQNCPVPKV 383

Query: 222  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNARHQNPHQQQHSFPG----VPSNSQQMA 55
                                            AR Q   QQ   FP     +P + Q   
Sbjct: 384  PFSDSGQELF----------------------ARRQQQQQQAQGFPQQLQLLPHHLQPRP 421

Query: 54   SMVARPKFVQDELGQQQ 4
            +M ++PK V +E+G  Q
Sbjct: 422  AMGSKPKMVGEEMGHHQ 438


>ref|XP_002511661.1| hypothetical protein RCOM_1610560 [Ricinus communis]
           gi|223548841|gb|EEF50330.1| hypothetical protein
           RCOM_1610560 [Ricinus communis]
          Length = 733

 Score =  131 bits (330), Expect = 3e-28
 Identities = 87/208 (41%), Positives = 112/208 (53%), Gaps = 15/208 (7%)
 Frame = -3

Query: 843 GQQSQEISGGGDSHRSIEKCG---LEMEDWESVLXXXXXXXXXXXXSVLGWIMGDVEDPS 673
           G  +  +SG      S EKCG   L MEDWE VL            S+L  IMGD+EDPS
Sbjct: 105 GVAAAAVSGNLSVDTSTEKCGQQQLGMEDWEGVLPGSPSQEQEQEQSILRLIMGDIEDPS 164

Query: 672 LGLNKVLQIGSG--DFDYNVGFGGMNQGFGLD--------NSSTIGSSSAHLMPTSFPQK 523
           LGLNK+LQ GSG  D ++N GFG ++QGFG +        NS    SS+  L+  +    
Sbjct: 165 LGLNKLLQDGSGSHDTEFNAGFGVVDQGFGFEPMNGANLVNSIDPISSAFPLLSHNARIG 224

Query: 522 LAPNFTNSQSPVFSPLGNNAAAS--NETGSISANXXXXXQIYNPQMLINQHQAQQTQNPA 349
              N T   +P  +  GNN  +       +I A       I+NPQ++INQ+QA  +QN A
Sbjct: 225 SVLNQTQDPNPATTSTGNNLLSGMFQHQPAIEAREEKPQ-IFNPQVIINQNQAHFSQNQA 283

Query: 348 FFLPVSYNDTQQNQHLFVPPHPKRLNSG 265
            FLP+SY   Q++ HL  PP PKRLNSG
Sbjct: 284 MFLPLSYAQLQEHHHLLSPPPPKRLNSG 311


>emb|CBI38908.3| unnamed protein product [Vitis vinifera]
          Length = 573

 Score =  114 bits (284), Expect = 7e-23
 Identities = 75/179 (41%), Positives = 89/179 (49%), Gaps = 3/179 (1%)
 Frame = -3

Query: 792 EKCGLEMEDWESVLXXXXXXXXXXXXSVLGWIMGDVEDPSLGLNKVLQIGSG---DFDYN 622
           EKCGL MEDWESVL             +L WIMGDVEDPS+GLNK+LQ G G   DF+++
Sbjct: 84  EKCGLGMEDWESVLSETAASPSQEQS-ILRWIMGDVEDPSVGLNKLLQSGGGGPPDFEFS 142

Query: 621 VGFGGMNQGFGLDNSSTIGSSSAHLMPTSFPQKLAPNFTNSQSPVFSPLGNNAAASNETG 442
            GFG ++QGFG + S               PQ L P                        
Sbjct: 143 SGFGVVDQGFGFEPSL-----------DEKPQILIP------------------------ 167

Query: 441 SISANXXXXXQIYNPQMLINQHQAQQTQNPAFFLPVSYNDTQQNQHLFVPPHPKRLNSG 265
                          Q+LINQHQAQ TQNPAFFLP+ Y   QQ Q+L +PP  KR N+G
Sbjct: 168 ---------------QVLINQHQAQHTQNPAFFLPLPY--AQQEQNLLLPPQAKRHNTG 209


>gb|ACV95482.1| SCL6 [Citrus trifoliata]
          Length = 706

 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 74/185 (40%), Positives = 99/185 (53%), Gaps = 9/185 (4%)
 Frame = -3

Query: 792 EKCG-LEMEDWESVLXXXXXXXXXXXXSVLGWIMGDVEDPSLGLNKVLQIGSGDFDYNVG 616
           EKCG L MEDWESVL             +L  IMGD +DPSLGLNK+L     D ++N G
Sbjct: 118 EKCGGLGMEDWESVLSGSPNQEQS----ILRLIMGDTDDPSLGLNKILH---QDTEFNAG 170

Query: 615 FGGMNQGFGLDNSSTIGSSSAHLMPTSFPQKLAPNFTNSQSPVFSPLGNNAAASNETGSI 436
           FG ++Q   L   +   S S+++ P            ++Q+ +FS     AAA+N +   
Sbjct: 171 FGVVDQA-SLGFETPFTSVSSNIDPDFVGNSARLGSGSNQNHIFS----TAAATNLSPPP 225

Query: 435 SA-------NXXXXXQIYNPQMLINQHQAQQTQNPAFFLPVSYNDTQQNQHL-FVPPHPK 280
           S              QI++PQ+++NQ+QAQ  QNPA FLP+SY   Q +Q L   PP PK
Sbjct: 226 SVFQPQPVEALDEKPQIFSPQLIMNQNQAQYAQNPALFLPLSYAQMQVHQLLPPAPPPPK 285

Query: 279 RLNSG 265
           RLN G
Sbjct: 286 RLNLG 290


>ref|XP_003516440.1| PREDICTED: scarecrow-like protein 6-like [Glycine max]
          Length = 737

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 103/349 (29%), Positives = 142/349 (40%), Gaps = 45/349 (12%)
 Frame = -3

Query: 1188 MKDMHLPFD-FQGKWGLDFLVFKEFTCSSSLSDPYFQKLEEHTQ-------------NTL 1051
            MK M LPF+ FQGK  LDF         SS SD  F  L  H Q              + 
Sbjct: 1    MKAMPLPFEEFQGKGVLDF---------SSASD-LFSVLLHHPQPKWTTDKADYCYVGSS 50

Query: 1050 VEPTSVLENIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVAAVSGNPSSKWA 871
             EPTSVL++                                     ++ + S N +SK  
Sbjct: 51   TEPTSVLDS----------------------RRSPSPPTSSSTMSSSLGSSSNNSTSKGG 88

Query: 870  QHEANNVVVGQQSQEISGGGDSH----RSIEKCGLEMEDWESVLXXXXXXXXXXXXSVLG 703
                 +          SG  +++     S EKCG+ MEDWE               S+L 
Sbjct: 89   GGSGTSANTTTNPTPPSGNNNNNPPQESSPEKCGIRMEDWEG-----------QDQSILR 137

Query: 702  WIMGDVEDPSLGLNKVLQ---IGSGDFDYNVGFGGMNQ-GFGLDNSSTIGSSSAHLMPTS 535
             IMGDVEDPS GL+K+LQ    GS   D+N GFG ++Q G  ++ +     +     P  
Sbjct: 138  LIMGDVEDPSAGLSKLLQSTACGSQSVDFNAGFGVVDQQGLNMNMNMVSSGNIDQNYPAG 197

Query: 534  FPQKLAPNFTN------------SQSPVFSPLGNN---AAASNETGSISANXXXXXQIY- 403
            FP  +A N               S+S VFS  GNN    + S   G  ++       +  
Sbjct: 198  FPF-IAENIDGQNAKAGSGTGQVSESVVFS--GNNPLMVSTSVSPGVFTSQQQQEFGVVD 254

Query: 402  ------NPQMLINQHQAQQTQNPAFFLPVSYNDTQ-QNQHLFVPPHPKR 277
                  NPQ ++NQ+Q Q ++NP+FF+P+ Y   Q Q Q +F PPH  +
Sbjct: 255  EKPQVINPQFMLNQNQVQFSENPSFFVPLMYPQVQVQEQQVFSPPHQSK 303


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