BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024610
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60...   105   4e-21
ref|NP_001063507.2| Os09g0483200 [Oryza sativa Japonica Group] g...   102   4e-20
gb|EAZ03906.1| hypothetical protein OsI_26040 [Oryza sativa Indi...   102   4e-20
ref|XP_003565733.1| PREDICTED: ubiquitin-60S ribosomal protein L...   101   5e-20
ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group] g...   101   7e-20

>ref|XP_003560187.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin-60S ribosomal protein
           L40-like [Brachypodium distachyon]
          Length = 213

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/72 (68%), Positives = 62/72 (86%), Gaps = 1/72 (1%)
 Frame = -1

Query: 388 ESTLDVLLRLRGGKGGYPK-IDPNLLQLALKFNQKKMICRKCYARLDIRAKNCRKKKCGH 212
           ESTL ++LRLRGG+G YP+ I+P LL+LALK+N++KMICRKCYARL  R+ NCRKKKCGH
Sbjct: 140 ESTLHLVLRLRGGRGCYPRRIEPTLLKLALKYNERKMICRKCYARLPSRSTNCRKKKCGH 199

Query: 211 SNELRPKSILDS 176
           + +LRPK  L+S
Sbjct: 200 TKDLRPKKKLNS 211


>ref|NP_001063507.2| Os09g0483200 [Oryza sativa Japonica Group]
           gi|218202352|gb|EEC84779.1| hypothetical protein
           OsI_31818 [Oryza sativa Indica Group]
           gi|222641803|gb|EEE69935.1| hypothetical protein
           OsJ_29804 [Oryza sativa Japonica Group]
           gi|255679002|dbj|BAF25421.2| Os09g0483200 [Oryza sativa
           Japonica Group]
          Length = 139

 Score =  102 bits (253), Expect = 4e-20
 Identities = 48/73 (65%), Positives = 60/73 (82%), Gaps = 1/73 (1%)
 Frame = -1

Query: 388 ESTLDVLLRLRGG-KGGYPKIDPNLLQLALKFNQKKMICRKCYARLDIRAKNCRKKKCGH 212
           ESTL ++LRLRGG +GGY   +P+LL LALK+N+KKM+CRKCYARL  R+ NCRKKKCGH
Sbjct: 64  ESTLHLVLRLRGGSRGGYTIQEPSLLLLALKYNEKKMVCRKCYARLPARSTNCRKKKCGH 123

Query: 211 SNELRPKSILDSK 173
           +N++RPK    SK
Sbjct: 124 TNQIRPKKRFISK 136


>gb|EAZ03906.1| hypothetical protein OsI_26040 [Oryza sativa Indica Group]
           gi|125600272|gb|EAZ39848.1| hypothetical protein
           OsJ_24288 [Oryza sativa Japonica Group]
          Length = 139

 Score =  102 bits (253), Expect = 4e-20
 Identities = 51/73 (69%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
 Frame = -1

Query: 388 ESTLDVLLRLRGG-KGGYPKIDPNLLQLALKFNQKKMICRKCYARLDIRAKNCRKKKCGH 212
           ESTL ++LRLRGG + GYP I+PNLL LA    +KKMICRKCYARL  +A NCRKKKCGH
Sbjct: 64  ESTLHLVLRLRGGGRPGYPMIEPNLLALARSKMEKKMICRKCYARLPYKATNCRKKKCGH 123

Query: 211 SNELRPKSILDSK 173
           +NELRPK  L SK
Sbjct: 124 TNELRPKKKLVSK 136


>ref|XP_003565733.1| PREDICTED: ubiquitin-60S ribosomal protein L40-2-like [Brachypodium
           distachyon]
          Length = 139

 Score =  101 bits (252), Expect = 5e-20
 Identities = 48/73 (65%), Positives = 59/73 (80%), Gaps = 1/73 (1%)
 Frame = -1

Query: 388 ESTLDVLLRL-RGGKGGYPKIDPNLLQLALKFNQKKMICRKCYARLDIRAKNCRKKKCGH 212
           ESTL ++LRL  GG+G YP+IDPNL  LALK N+ KM+CRKC+ARL +R+ NCRKKKCGH
Sbjct: 64  ESTLHLVLRLFGGGRGWYPRIDPNLRILALKHNENKMVCRKCFARLPVRSINCRKKKCGH 123

Query: 211 SNELRPKSILDSK 173
           SN++RPK    SK
Sbjct: 124 SNQVRPKKKFASK 136


>ref|NP_001063337.1| Os09g0452700 [Oryza sativa Japonica Group]
           gi|51535937|dbj|BAD38019.1| putative ubiquitin /
           ribosomal protein CEP52 [Oryza sativa Japonica Group]
           gi|113631570|dbj|BAF25251.1| Os09g0452700 [Oryza sativa
           Japonica Group] gi|125563958|gb|EAZ09338.1| hypothetical
           protein OsI_31610 [Oryza sativa Indica Group]
           gi|125605917|gb|EAZ44953.1| hypothetical protein
           OsJ_29596 [Oryza sativa Japonica Group]
          Length = 140

 Score =  101 bits (251), Expect = 7e-20
 Identities = 48/74 (64%), Positives = 61/74 (82%), Gaps = 2/74 (2%)
 Frame = -1

Query: 388 ESTLDVLLRLRGG-KGGYPK-IDPNLLQLALKFNQKKMICRKCYARLDIRAKNCRKKKCG 215
           ESTL ++LRLRGG +GGYPK I+PNL +LA K+N+ K++CR+CYARL +R+ NCRKKKCG
Sbjct: 64  ESTLHLVLRLRGGSRGGYPKGIEPNLRELAQKYNENKLVCRRCYARLPLRSTNCRKKKCG 123

Query: 214 HSNELRPKSILDSK 173
           HSNE+R K    SK
Sbjct: 124 HSNEIRAKKRFMSK 137