BLASTX nr result

ID: Bupleurum21_contig00024608 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024608
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527249.1| conserved hypothetical protein [Ricinus comm...   311   1e-82
ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|2...   306   4e-81
ref|XP_004171234.1| PREDICTED: HAUS augmin-like complex subunit ...   303   3e-80
ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit ...   303   3e-80
ref|XP_003589728.1| HAUS augmin-like complex subunit [Medicago t...   275   7e-72

>ref|XP_002527249.1| conserved hypothetical protein [Ricinus communis]
           gi|223533342|gb|EEF35093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 616

 Score =  311 bits (796), Expect = 1e-82
 Identities = 156/176 (88%), Positives = 168/176 (95%)
 Frame = -3

Query: 746 ASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIAQQISSLHSDLMILQSD 567
           ASD+QEQGAVDDRD  LHGVRDLLSIHSNAQAGLSTYVSAPGI QQIS+LHSDLM LQSD
Sbjct: 441 ASDIQEQGAVDDRDNLLHGVRDLLSIHSNAQAGLSTYVSAPGIVQQISALHSDLMTLQSD 500

Query: 566 LEHALPEDRNRCINELCTLIQSLQQLLFASSTTAQPNLSPRILMKELNEMEKVNAKLSAA 387
           LE++LPEDRN+CINELCTLIQSLQQLLFASSTTAQP L+PR LMKEL+EMEK+NAKLSAA
Sbjct: 501 LENSLPEDRNKCINELCTLIQSLQQLLFASSTTAQPILTPRPLMKELDEMEKINAKLSAA 560

Query: 386 VEEVTLEHCKKNEIVKHHSQEMALQRRVFVDFFCNPDRLRNQVRELTARVRALQAS 219
           VEEVTLEHCKKNEIVKHH+QE+ LQRRVFVDFFCNP+RLR+QVRELTARVRALQ S
Sbjct: 561 VEEVTLEHCKKNEIVKHHAQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVS 616


>ref|XP_002320600.1| predicted protein [Populus trichocarpa] gi|222861373|gb|EEE98915.1|
            predicted protein [Populus trichocarpa]
          Length = 661

 Score =  306 bits (783), Expect = 4e-81
 Identities = 153/176 (86%), Positives = 166/176 (94%)
 Frame = -3

Query: 746  ASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIAQQISSLHSDLMILQSD 567
            ASD+QEQGAVDDRDT LHG+RDLLSIHSNAQAGLS YVSAPGI QQIS+LH+DLM LQSD
Sbjct: 486  ASDIQEQGAVDDRDTLLHGIRDLLSIHSNAQAGLSIYVSAPGIVQQISALHADLMTLQSD 545

Query: 566  LEHALPEDRNRCINELCTLIQSLQQLLFASSTTAQPNLSPRILMKELNEMEKVNAKLSAA 387
            LE++LPEDRNRCI ELCTLIQSLQQLLFASSTTAQP L+PR LMKEL+EMEK+NAKLS A
Sbjct: 546  LENSLPEDRNRCIIELCTLIQSLQQLLFASSTTAQPILTPRTLMKELDEMEKINAKLSVA 605

Query: 386  VEEVTLEHCKKNEIVKHHSQEMALQRRVFVDFFCNPDRLRNQVRELTARVRALQAS 219
            VEEVTLEHCKKNEIVKHHSQE+ LQRRVFVDFFCNP+RLR+QVRELTARVRALQ +
Sbjct: 606  VEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRALQVA 661


>ref|XP_004171234.1| PREDICTED: HAUS augmin-like complex subunit 3-like, partial
           [Cucumis sativus]
          Length = 253

 Score =  303 bits (776), Expect = 3e-80
 Identities = 152/175 (86%), Positives = 166/175 (94%)
 Frame = -3

Query: 746 ASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIAQQISSLHSDLMILQSD 567
           ASDVQEQGAVDDRD+FLHGVRDLLSIHSN QAG+STYVSAPGI QQIS LHSDL  LQSD
Sbjct: 79  ASDVQEQGAVDDRDSFLHGVRDLLSIHSNIQAGVSTYVSAPGIIQQISHLHSDLRTLQSD 138

Query: 566 LEHALPEDRNRCINELCTLIQSLQQLLFASSTTAQPNLSPRILMKELNEMEKVNAKLSAA 387
           LE++LP DRNRCIN+LC+LIQSLQQLLFASSTTAQP L+PR LMKEL+EMEK+NAKLS+A
Sbjct: 139 LENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPLLTPRALMKELDEMEKINAKLSSA 198

Query: 386 VEEVTLEHCKKNEIVKHHSQEMALQRRVFVDFFCNPDRLRNQVRELTARVRALQA 222
           VEEVTLEHCKKNEIVKHHSQE+ LQRRVFVDFFCNP+RLR+QVRELTARVRA+QA
Sbjct: 199 VEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRAMQA 253


>ref|XP_004150336.1| PREDICTED: HAUS augmin-like complex subunit 3-like [Cucumis
           sativus]
          Length = 615

 Score =  303 bits (776), Expect = 3e-80
 Identities = 152/175 (86%), Positives = 166/175 (94%)
 Frame = -3

Query: 746 ASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIAQQISSLHSDLMILQSD 567
           ASDVQEQGAVDDRD+FLHGVRDLLSIHSN QAG+STYVSAPGI QQIS LHSDL  LQSD
Sbjct: 441 ASDVQEQGAVDDRDSFLHGVRDLLSIHSNIQAGVSTYVSAPGIIQQISHLHSDLRTLQSD 500

Query: 566 LEHALPEDRNRCINELCTLIQSLQQLLFASSTTAQPNLSPRILMKELNEMEKVNAKLSAA 387
           LE++LP DRNRCIN+LC+LIQSLQQLLFASSTTAQP L+PR LMKEL+EMEK+NAKLS+A
Sbjct: 501 LENSLPGDRNRCINDLCSLIQSLQQLLFASSTTAQPLLTPRALMKELDEMEKINAKLSSA 560

Query: 386 VEEVTLEHCKKNEIVKHHSQEMALQRRVFVDFFCNPDRLRNQVRELTARVRALQA 222
           VEEVTLEHCKKNEIVKHHSQE+ LQRRVFVDFFCNP+RLR+QVRELTARVRA+QA
Sbjct: 561 VEEVTLEHCKKNEIVKHHSQEVGLQRRVFVDFFCNPERLRSQVRELTARVRAMQA 615


>ref|XP_003589728.1| HAUS augmin-like complex subunit [Medicago truncatula]
            gi|355478776|gb|AES59979.1| HAUS augmin-like complex
            subunit [Medicago truncatula]
          Length = 690

 Score =  275 bits (703), Expect = 7e-72
 Identities = 139/176 (78%), Positives = 152/176 (86%)
 Frame = -3

Query: 746  ASDVQEQGAVDDRDTFLHGVRDLLSIHSNAQAGLSTYVSAPGIAQQISSLHSDLMILQSD 567
            ASD QEQG V D D FLH +RDLL I+SN QA LSTYVSAPGI QQIS+LHSDLM LQSD
Sbjct: 512  ASDGQEQGGVHDSDNFLHAIRDLLKIYSNTQAALSTYVSAPGIVQQISALHSDLMTLQSD 571

Query: 566  LEHALPEDRNRCINELCTLIQSLQQLLFASSTTAQPNLSPRILMKELNEMEKVNAKLSAA 387
            L+++LPE+RNRCINELC LIQS+QQLLFASSTTAQP L+PR LMKEL+EMEK+N KLS A
Sbjct: 572  LDNSLPEERNRCINELCNLIQSMQQLLFASSTTAQPILTPRPLMKELDEMEKINTKLSLA 631

Query: 386  VEEVTLEHCKKNEIVKHHSQEMALQRRVFVDFFCNPDRLRNQVRELTARVRALQAS 219
            VE VTLEH KKNEI+KHH QE  LQRRVFVDFFCNP+RL NQV ELTARVRALQ S
Sbjct: 632  VEAVTLEHVKKNEIIKHHQQEYELQRRVFVDFFCNPERLMNQVTELTARVRALQIS 687


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