BLASTX nr result

ID: Bupleurum21_contig00024596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024596
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putat...   283   1e-74
ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|2...   273   1e-71
ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   272   3e-71
emb|CBI24406.3| unnamed protein product [Vitis vinifera]              272   3e-71
ref|XP_004172686.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin ca...   270   9e-71

>ref|XP_002515876.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223545031|gb|EEF46545.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 889

 Score =  283 bits (725), Expect = 1e-74
 Identities = 136/186 (73%), Positives = 158/186 (84%)
 Frame = -3

Query: 562 AFLLDGLHEDVNRVKTKPYVEVKDSDGRPDEKVADEYWQNHLARNDSIIVDVCQGQYRST 383
           AFLLDGLHED+NRVK+KPYVE KD +GR DE+VADEYWQNH+ARNDSIIVD+CQGQY+ST
Sbjct: 385 AFLLDGLHEDLNRVKSKPYVEAKDGEGRLDEEVADEYWQNHVARNDSIIVDICQGQYKST 444

Query: 382 LVCPLCRKSSITFDPFMYVSLPLPSTSLRSMTLTVMTTDGSSQQFSVTVTVPKNGKLEDL 203
           LVCP+C+K S+TFDPFMY+SLPLPST++R+MTLTV++TDGSSQ  S T++VPK GK EDL
Sbjct: 445 LVCPICKKVSVTFDPFMYLSLPLPSTNIRTMTLTVVSTDGSSQPSSFTISVPKYGKCEDL 504

Query: 202 NQALGSACSIXXXXXXXXXXVYNNKIIRYLEDPSDSLSLIRDEDRLVAYRLPKDFGKFPL 23
            QAL  ACS+          VYNN+IIRYLE+PSDSLSLIRD DRLVAYRL K+    PL
Sbjct: 505 TQALSKACSLGIDEMLLVAEVYNNRIIRYLEEPSDSLSLIRDGDRLVAYRLKKELDNIPL 564

Query: 22  VVFMHQ 5
           VVFMHQ
Sbjct: 565 VVFMHQ 570


>ref|XP_002299762.1| predicted protein [Populus trichocarpa] gi|222847020|gb|EEE84567.1|
           predicted protein [Populus trichocarpa]
          Length = 624

 Score =  273 bits (698), Expect = 1e-71
 Identities = 133/186 (71%), Positives = 153/186 (82%)
 Frame = -3

Query: 562 AFLLDGLHEDVNRVKTKPYVEVKDSDGRPDEKVADEYWQNHLARNDSIIVDVCQGQYRST 383
           AFLLDGLHED+NRVK+KPYVE KD + RPDE+VADEYWQNH+ARNDS+IVDVCQGQY+ST
Sbjct: 124 AFLLDGLHEDLNRVKSKPYVEAKDEESRPDEEVADEYWQNHVARNDSVIVDVCQGQYKST 183

Query: 382 LVCPLCRKSSITFDPFMYVSLPLPSTSLRSMTLTVMTTDGSSQQFSVTVTVPKNGKLEDL 203
           LVCP CRK S+TFDPFMY+SLPLPST+ R+MTLTV++ DGS Q  S T++VPK GK EDL
Sbjct: 184 LVCPDCRKVSVTFDPFMYLSLPLPSTNTRTMTLTVVSADGSIQPSSYTISVPKFGKCEDL 243

Query: 202 NQALGSACSIXXXXXXXXXXVYNNKIIRYLEDPSDSLSLIRDEDRLVAYRLPKDFGKFPL 23
             AL  ACS+          VYNN+IIR+LE+P+D LSLIRD DRLVAYRL KDF   PL
Sbjct: 244 IHALSIACSLGIDETLLVAEVYNNRIIRFLEEPADYLSLIRDNDRLVAYRLKKDFDNSPL 303

Query: 22  VVFMHQ 5
           VVFMHQ
Sbjct: 304 VVFMHQ 309


>ref|XP_003632213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Vitis
           vinifera]
          Length = 882

 Score =  272 bits (695), Expect = 3e-71
 Identities = 133/187 (71%), Positives = 155/187 (82%)
 Frame = -3

Query: 562 AFLLDGLHEDVNRVKTKPYVEVKDSDGRPDEKVADEYWQNHLARNDSIIVDVCQGQYRST 383
           AFLLDGLHED+NRVK KPY+E KD +G PDE+VADEYW+NHLARNDSIIVDV QGQYRST
Sbjct: 380 AFLLDGLHEDLNRVKCKPYIEAKDGEGWPDEEVADEYWRNHLARNDSIIVDVSQGQYRST 439

Query: 382 LVCPLCRKSSITFDPFMYVSLPLPSTSLRSMTLTVMTTDGSSQQFSVTVTVPKNGKLEDL 203
           LVCP+C+K SITFDPFMY+SLPLPST++R+MTLTV++ DG +Q    T+TVPKNGK EDL
Sbjct: 440 LVCPVCKKVSITFDPFMYLSLPLPSTTMRTMTLTVVSADGITQPSPCTITVPKNGKCEDL 499

Query: 202 NQALGSACSIXXXXXXXXXXVYNNKIIRYLEDPSDSLSLIRDEDRLVAYRLPKDFGKFPL 23
            QAL S+C +          +YNN+IIRYLEDP+DSLSLIRD DRLVAYRLPK   +  L
Sbjct: 500 IQALSSSCYLKDDETLLVAEIYNNRIIRYLEDPTDSLSLIRDGDRLVAYRLPKVTNEDRL 559

Query: 22  VVFMHQQ 2
           VVFMHQ+
Sbjct: 560 VVFMHQR 566


>emb|CBI24406.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  272 bits (695), Expect = 3e-71
 Identities = 133/187 (71%), Positives = 155/187 (82%)
 Frame = -3

Query: 562 AFLLDGLHEDVNRVKTKPYVEVKDSDGRPDEKVADEYWQNHLARNDSIIVDVCQGQYRST 383
           AFLLDGLHED+NRVK KPY+E KD +G PDE+VADEYW+NHLARNDSIIVDV QGQYRST
Sbjct: 356 AFLLDGLHEDLNRVKCKPYIEAKDGEGWPDEEVADEYWRNHLARNDSIIVDVSQGQYRST 415

Query: 382 LVCPLCRKSSITFDPFMYVSLPLPSTSLRSMTLTVMTTDGSSQQFSVTVTVPKNGKLEDL 203
           LVCP+C+K SITFDPFMY+SLPLPST++R+MTLTV++ DG +Q    T+TVPKNGK EDL
Sbjct: 416 LVCPVCKKVSITFDPFMYLSLPLPSTTMRTMTLTVVSADGITQPSPCTITVPKNGKCEDL 475

Query: 202 NQALGSACSIXXXXXXXXXXVYNNKIIRYLEDPSDSLSLIRDEDRLVAYRLPKDFGKFPL 23
            QAL S+C +          +YNN+IIRYLEDP+DSLSLIRD DRLVAYRLPK   +  L
Sbjct: 476 IQALSSSCYLKDDETLLVAEIYNNRIIRYLEDPTDSLSLIRDGDRLVAYRLPKVTNEDRL 535

Query: 22  VVFMHQQ 2
           VVFMHQ+
Sbjct: 536 VVFMHQR 542


>ref|XP_004172686.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
           hydrolase 8-like, partial [Cucumis sativus]
          Length = 588

 Score =  270 bits (691), Expect = 9e-71
 Identities = 134/187 (71%), Positives = 155/187 (82%)
 Frame = -3

Query: 562 AFLLDGLHEDVNRVKTKPYVEVKDSDGRPDEKVADEYWQNHLARNDSIIVDVCQGQYRST 383
           AFLLDGLHED+NRVK KPYVE KD DGR D +VADEYWQNHLARNDSIIVDVCQGQY+ST
Sbjct: 213 AFLLDGLHEDLNRVKKKPYVEAKDGDGRSDNEVADEYWQNHLARNDSIIVDVCQGQYKST 272

Query: 382 LVCPLCRKSSITFDPFMYVSLPLPSTSLRSMTLTVMTTDGSSQQFSVTVTVPKNGKLEDL 203
           LVCP+C+K S TFDPFMY+SLPLPST++R+MTLTV++TDGS+     T+TVPK+GK EDL
Sbjct: 273 LVCPICKKVSTTFDPFMYLSLPLPSTTMRTMTLTVVSTDGSTPA-PYTITVPKSGKWEDL 331

Query: 202 NQALGSACSIXXXXXXXXXXVYNNKIIRYLEDPSDSLSLIRDEDRLVAYRLPKDFGKFPL 23
            +AL  ACS+          VYNN+IIRYLE+P+DSLSLIRD DRLVAYRL KD  + PL
Sbjct: 332 IKALSIACSLKADETLLVAEVYNNRIIRYLEEPADSLSLIRDGDRLVAYRLAKDEEQVPL 391

Query: 22  VVFMHQQ 2
            VFMHQ+
Sbjct: 392 AVFMHQR 398


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