BLASTX nr result

ID: Bupleurum21_contig00024594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024594
         (522 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004142045.1| PREDICTED: crossover junction endonuclease E...    85   7e-15
ref|XP_003524287.1| PREDICTED: uncharacterized protein LOC100813...    82   5e-14
ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254...    79   3e-13
emb|CAN81506.1| hypothetical protein VITISV_035404 [Vitis vinifera]    74   1e-11
ref|XP_003630146.1| hypothetical protein MTR_8g092300 [Medicago ...    68   9e-10

>ref|XP_004142045.1| PREDICTED: crossover junction endonuclease EME1B-like [Cucumis
           sativus] gi|449487947|ref|XP_004157880.1| PREDICTED:
           crossover junction endonuclease EME1B-like [Cucumis
           sativus]
          Length = 563

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 16/173 (9%)
 Frame = -3

Query: 493 MSQPNPVTILSDEEDTETLEIPDSTPVTYNSKRQRTLFDF----KSTAPVFVIDDDPTPR 326
           MSQP    ILSDEED        STP+   SK++RT  D     KST  V V+DDDPTP+
Sbjct: 1   MSQP---IILSDEEDRY------STPIPIPSKKRRTESDLLPNIKST--VLVLDDDPTPQ 49

Query: 325 KSSA-STPTIVPETPMSDIQNSGPVVVRCTKTV---------SDPKPSGITGLILLESDN 176
           KS+  S  + VPETP+S   +S   +V+CTK           SD K +GI+GLI LESDN
Sbjct: 50  KSNHNSAASFVPETPLSPQPSSDVAIVKCTKAGLNLHARDLNSDQKFAGISGLICLESDN 109

Query: 175 ESDNIRETGARKQHE-MPQATYEVDTF-PEFGYKCTESHFSLGNAAMSQMYGE 23
           ES++  +    +Q E +    YE+        +    S  SLGN  + ++ G+
Sbjct: 110 ESESDSQKKKCEQSEWIGSDCYEMKNIGASLPFDSAGSGSSLGNDDLQEISGD 162


>ref|XP_003524287.1| PREDICTED: uncharacterized protein LOC100813276 [Glycine max]
          Length = 624

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 67/160 (41%), Positives = 84/160 (52%), Gaps = 15/160 (9%)
 Frame = -3

Query: 469 ILSDEEDTETLEIPDSTPVTYNSKRQRTLFDFKSTA--PVFVIDDDPTPRKSSASTPTIV 296
           ILSDEED        STP     K++RT  D        VFVIDDDPTP KS+  TP+IV
Sbjct: 5   ILSDEEDP-------STPFPLRPKKRRTEPDPNPNPNRTVFVIDDDPTPHKSA--TPSIV 55

Query: 295 PETPMSDIQNSGPVVVRCTKTVSDP----------KPSGITGLILLESDNESDNIRETGA 146
           PETPMS + +S   +V+CT   SDP           PSGI+ +I LESDNES+N    G 
Sbjct: 56  PETPMSALFDSDIAIVKCT-IPSDPTARVSPKKFSAPSGISQMICLESDNESENC-GMGT 113

Query: 145 RKQHEMPQATYEVDTFPEFGYK---CTESHFSLGNAAMSQ 35
           R ++E P+ +  +      G     C ES   L N  M +
Sbjct: 114 RDKNE-PRDSRWISNSMGSGSSPGICLESDNELENCGMDK 152


>ref|XP_002275413.2| PREDICTED: uncharacterized protein LOC100254360 [Vitis vinifera]
          Length = 678

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 15/136 (11%)
 Frame = -3

Query: 493 MSQPNPVTILSDEE-DTETLEIPDSTPVTYNSKRQRTL-FDFKSTAP---VFVIDDDPTP 329
           M++P  + ILSD++ D  +L    STP+   SK++RT   D  ST P   + +IDDDPTP
Sbjct: 1   MAEPISLHILSDDDQDPSSLH---STPLPIQSKKRRTEDCDPISTLPYPTILIIDDDPTP 57

Query: 328 RK-SSASTPTIVPETPMSDIQNSGPVVVRCT---------KTVSDPKPSGITGLILLESD 179
           RK  S STP+ V ETP+S +  S   +V+CT          + SD K + I+ LI LESD
Sbjct: 58  RKPGSDSTPSFVAETPLSGLSKSDVSIVKCTYASSNPEVRVSTSDQKFAEISRLICLESD 117

Query: 178 NESDNIRETGARKQHE 131
           NES+N    G  K++E
Sbjct: 118 NESENGIGRGNLKENE 133


>emb|CAN81506.1| hypothetical protein VITISV_035404 [Vitis vinifera]
          Length = 454

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 56/136 (41%), Positives = 78/136 (57%), Gaps = 15/136 (11%)
 Frame = -3

Query: 493 MSQPNPVTILSDEE-DTETLEIPDSTPVTYNSKRQRTL-FDFKSTAP---VFVIDDDPTP 329
           M++P  + ILSD++ D  +L    STP+   SK++RT   D  ST P   + +IDDDPTP
Sbjct: 1   MAEPISLHILSDDDQDPSSLH---STPLPIQSKKRRTEDCDPISTLPYPTILIIDDDPTP 57

Query: 328 RKS-SASTPTIVPETPMSDIQNSGPVVVRCT---------KTVSDPKPSGITGLILLESD 179
           RK  S STP+ V  TP+S +  S   +V+CT          + SD K + I+ LI LESD
Sbjct: 58  RKPXSDSTPSFVAXTPLSGLSKSDVSIVKCTYASSNPEVRVSTSDQKFAEISRLICLESD 117

Query: 178 NESDNIRETGARKQHE 131
           NES+     G  K++E
Sbjct: 118 NESEXGIGRGNLKENE 133


>ref|XP_003630146.1| hypothetical protein MTR_8g092300 [Medicago truncatula]
           gi|355524168|gb|AET04622.1| hypothetical protein
           MTR_8g092300 [Medicago truncatula]
          Length = 578

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 57/168 (33%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
 Frame = -3

Query: 469 ILSDEEDTETLEIPDSTPVTYNSKRQRTLFDFKSTAPVFVIDDDPTPRKSS---ASTPT- 302
           ILSDE+D        +TP   +SK++RT         VF+IDDDPTP+K     +STP+ 
Sbjct: 5   ILSDEDDP-------TTPFPVHSKKRRTSQPDPHPT-VFLIDDDPTPQKQHHLPSSTPSL 56

Query: 301 IVPETPMSDIQNSGPVVVRCTKTVSDPKPSGITGLILLESDNESDNI----------RET 152
           +VPETP S + +S   +V+CT   ++   SGI+ +I LESD+E +N              
Sbjct: 57  VVPETPFSPLFDSEIAIVKCTSAPTN--ASGISQMICLESDDEPENSGMGNWNENEDEAR 114

Query: 151 GARKQHEMPQATYEVDTFPEFGYKCTESHF-SLGNAAMSQMYGEKSSD 11
           G    +E P       TF   G   +   F S GN   ++M  +  S+
Sbjct: 115 GLLSSYE-PIVGNSTRTFDSIGAGSSHERFVSCGNVTQAEMSEDNPSN 161


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