BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024593
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   315   8e-84
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   315   8e-84
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   309   3e-82
ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|2...   308   7e-82
ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containi...   165   1e-38

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  315 bits (806), Expect = 8e-84
 Identities = 156/237 (65%), Positives = 190/237 (80%)
 Frame = +3

Query: 3    QNALTDMYVKSGFIDYASNIFSRMSVKDNISWTVMILGYSLHGKPELGVDSYRELLKSSN 182
            QNA+ DMYVKSGFI+ A+ IF+ M  +D ISWTVMILGYSLHG+ ELGVD +R++ K+S+
Sbjct: 333  QNAVLDMYVKSGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSS 392

Query: 183  KDIDWITHAAVLYACRTAIMVEEGKSVFKCIRSPKVAICSLMVSLLARAGLFDEARRFIE 362
             +ID I +AA L+AC TA +VE+G+  F CI +PK    +LMV+LL+R GLFDEAR F+E
Sbjct: 393  VEIDQIAYAAALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFME 452

Query: 363  EKQIARHAEVLRAFLDGCRINQCINVGKRVIEQLCDLEPLNAENYVLLSNLYAYAGKIDM 542
            E ++  H EVLRA LDGCRI+  +   KRVIEQLCDL+ LNA+NYVLLSN Y+   K DM
Sbjct: 453  EHKLEGHVEVLRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDM 512

Query: 543  VEELRETIRDMGLTPKKAYSWIEFKNKIHVFGTGDVTHPRSERIYWELKCLMNQIEE 713
            V ELRETIRDMGL P+KAYSWIEF+NKIHVFGTGDV+HPRSE+IYWEL  LM +IEE
Sbjct: 513  VNELRETIRDMGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEE 569


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  315 bits (806), Expect = 8e-84
 Identities = 156/237 (65%), Positives = 190/237 (80%)
 Frame = +3

Query: 3    QNALTDMYVKSGFIDYASNIFSRMSVKDNISWTVMILGYSLHGKPELGVDSYRELLKSSN 182
            QNA+ DMYVKSGFI+ A+ IF+ M  +D ISWTVMILGYSLHG+ ELGVD +R++ K+S+
Sbjct: 405  QNAVLDMYVKSGFIESAAKIFAGMKDRDAISWTVMILGYSLHGQGELGVDLFRKMEKNSS 464

Query: 183  KDIDWITHAAVLYACRTAIMVEEGKSVFKCIRSPKVAICSLMVSLLARAGLFDEARRFIE 362
             +ID I +AA L+AC TA +VE+G+  F CI +PK    +LMV+LL+R GLFDEAR F+E
Sbjct: 465  VEIDQIAYAAALHACTTARLVEQGRFYFNCITAPKSRHYALMVALLSRVGLFDEARVFME 524

Query: 363  EKQIARHAEVLRAFLDGCRINQCINVGKRVIEQLCDLEPLNAENYVLLSNLYAYAGKIDM 542
            E ++  H EVLRA LDGCRI+  +   KRVIEQLCDL+ LNA+NYVLLSN Y+   K DM
Sbjct: 525  EHKLEGHVEVLRALLDGCRIHHNMRTAKRVIEQLCDLQTLNADNYVLLSNWYSSFAKWDM 584

Query: 543  VEELRETIRDMGLTPKKAYSWIEFKNKIHVFGTGDVTHPRSERIYWELKCLMNQIEE 713
            V ELRETIRDMGL P+KAYSWIEF+NKIHVFGTGDV+HPRSE+IYWEL  LM +IEE
Sbjct: 585  VNELRETIRDMGLKPRKAYSWIEFRNKIHVFGTGDVSHPRSEKIYWELHSLMKKIEE 641


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  309 bits (792), Expect = 3e-82
 Identities = 154/237 (64%), Positives = 184/237 (77%)
 Frame = +3

Query: 3    QNALTDMYVKSGFIDYASNIFSRMSVKDNISWTVMILGYSLHGKPELGVDSYRELLKSSN 182
            QNAL DMYVKSG I  AS  FS M  KD +SW++M LGYSLHG+ +LGV  +RE+ K+  
Sbjct: 300  QNALVDMYVKSGCIQSASKTFSMMKEKDMVSWSIMTLGYSLHGQGKLGVSLFREMEKNFK 359

Query: 183  KDIDWITHAAVLYACRTAIMVEEGKSVFKCIRSPKVAICSLMVSLLARAGLFDEARRFIE 362
               D IT+ AVL+AC TA MV+EG S F CI  P VA  +L V+LLARAG  DEAR F+E
Sbjct: 360  MRRDEITYTAVLHACTTANMVDEGDSYFSCITKPTVAHIALKVALLARAGRLDEARTFVE 419

Query: 363  EKQIARHAEVLRAFLDGCRINQCINVGKRVIEQLCDLEPLNAENYVLLSNLYAYAGKIDM 542
            +K++ +H E+LRA LDGCR ++   +GKR+IEQLCDLEPLNAENY+LLSN YA   K DM
Sbjct: 420  KKKLDKHPEILRALLDGCRNHRQQKLGKRIIEQLCDLEPLNAENYILLSNWYACNEKWDM 479

Query: 543  VEELRETIRDMGLTPKKAYSWIEFKNKIHVFGTGDVTHPRSERIYWELKCLMNQIEE 713
            VE+LRETIRDMGL PKKAYSWIEF NKIHVFGTGDV+HPRS+ IYW L+CLM ++EE
Sbjct: 480  VEKLRETIRDMGLRPKKAYSWIEFCNKIHVFGTGDVSHPRSQNIYWNLQCLMKEMEE 536


>ref|XP_002303738.1| predicted protein [Populus trichocarpa] gi|222841170|gb|EEE78717.1|
            predicted protein [Populus trichocarpa]
          Length = 663

 Score =  308 bits (789), Expect = 7e-82
 Identities = 151/235 (64%), Positives = 181/235 (77%)
 Frame = +3

Query: 3    QNALTDMYVKSGFIDYASNIFSRMSVKDNISWTVMILGYSLHGKPELGVDSYRELLKSSN 182
            QNA TDMY KSG +DYA  +F RM  +D ISWTVMILG+SLHGK ELGV+ +  + K   
Sbjct: 334  QNATTDMYAKSGLVDYALKVFERMKKRDVISWTVMILGFSLHGKGELGVELFCRMEKDQR 393

Query: 183  KDIDWITHAAVLYACRTAIMVEEGKSVFKCIRSPKVAICSLMVSLLARAGLFDEARRFIE 362
             + D  T+AAVL+ C  A MVEEGK  F CI+ P +   +LMVSLLARA LFDEAR F+E
Sbjct: 394  VEADQFTYAAVLHCCTAACMVEEGKFYFNCIKEPNITHYALMVSLLARACLFDEARAFME 453

Query: 363  EKQIARHAEVLRAFLDGCRINQCINVGKRVIEQLCDLEPLNAENYVLLSNLYAYAGKIDM 542
            E  I RHAEVLRA LDGC ++   N+GK+V EQLCDLEPL+AENYVLLSN Y+  GK D+
Sbjct: 454  EHHIERHAEVLRALLDGCWMHHRRNIGKQVFEQLCDLEPLDAENYVLLSNWYSDNGKWDL 513

Query: 543  VEELRETIRDMGLTPKKAYSWIEFKNKIHVFGTGDVTHPRSERIYWELKCLMNQI 707
            V++LRETI  MG  PKKAYSWIEF+NK+HVFGTGD++HPRSERIY EL+CLM ++
Sbjct: 514  VDKLRETIMSMGSKPKKAYSWIEFQNKVHVFGTGDISHPRSERIYTELQCLMKKV 568


>ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  165 bits (417), Expect = 1e-38
 Identities = 86/241 (35%), Positives = 138/241 (57%), Gaps = 5/241 (2%)
 Frame = +3

Query: 6    NALTDMYVKSGFIDYASNIFSRMSVKDNISWTVMILGYSLHGKPELGVDSYRELLKSSNK 185
            N+L DMY K G +DY+  +F+ M  KD +SW  M+ GY++HG  +  +  +  L++ S  
Sbjct: 672  NSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRAIALF-SLMQESQV 730

Query: 186  DIDWITHAAVLYACRTAIMVEEGKSVFKCIRS-----PKVAICSLMVSLLARAGLFDEAR 350
             ID ++  +VL ACR A +VEEG+ +F  +       P +   + MV LL RAGLFDE  
Sbjct: 731  QIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVDLLGRAGLFDETL 790

Query: 351  RFIEEKQIARHAEVLRAFLDGCRINQCINVGKRVIEQLCDLEPLNAENYVLLSNLYAYAG 530
             FI+   +   A V  A L  CR++  + +G+  ++ L  LEP N  ++V+LS++YA +G
Sbjct: 791  GFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRNPAHFVVLSSIYAQSG 850

Query: 531  KIDMVEELRETIRDMGLTPKKAYSWIEFKNKIHVFGTGDVTHPRSERIYWELKCLMNQIE 710
            +     + R  + D+GL      SW+E KNK+H F  GD +HP+ E ++     L+ ++E
Sbjct: 851  RWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQLESMHLLWNTLLEKME 910

Query: 711  E 713
            +
Sbjct: 911  K 911