BLASTX nr result

ID: Bupleurum21_contig00024581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00024581
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containin...   122   2e-26
ref|XP_002515733.1| conserved hypothetical protein [Ricinus comm...   121   7e-26
ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containin...   117   1e-24
ref|XP_004144583.1| PREDICTED: zinc finger CCCH domain-containin...   114   6e-24
ref|NP_001045976.1| Os02g0161200 [Oryza sativa Japonica Group] g...   114   1e-23

>ref|XP_002274263.1| PREDICTED: zinc finger CCCH domain-containing protein 13 [Vitis
           vinifera] gi|297739310|emb|CBI28961.3| unnamed protein
           product [Vitis vinifera]
          Length = 444

 Score =  122 bits (307), Expect = 2e-26
 Identities = 64/116 (55%), Positives = 86/116 (74%)
 Frame = -3

Query: 350 SKEKLDEQLSYVRSEIQMLEDNKTRLKMYLEERVQEVDTLNAKIQELEVQLHKEKDECER 171
           SK  L EQL  V+ +I  L+D+K++LK Y+EERVQE D+L ++IQELE QL+KE+++C+R
Sbjct: 131 SKNVLGEQLKQVQLDIDRLDDHKSQLKTYMEERVQEADSLTSRIQELESQLYKEREDCKR 190

Query: 170 IISMTKKFIKAHIRHTRLQKELLRSQVRLHKLGDQLGSDVDKPDPNEEGASINIAS 3
           I S  KKF+KAH R+ R+Q +L RS+ RL KLG QL SD  K   NEE +SI+I S
Sbjct: 191 ITSKIKKFVKAHSRYLRIQDDLKRSEARLQKLGSQLISDTSK-HANEEDSSIDILS 245


>ref|XP_002515733.1| conserved hypothetical protein [Ricinus communis]
           gi|223545170|gb|EEF46680.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 448

 Score =  121 bits (303), Expect = 7e-26
 Identities = 61/116 (52%), Positives = 86/116 (74%)
 Frame = -3

Query: 350 SKEKLDEQLSYVRSEIQMLEDNKTRLKMYLEERVQEVDTLNAKIQELEVQLHKEKDECER 171
           S+  L EQL  VR+EI MLE  K++L++ ++E+++E D L+++I+EL+ QL KEK+EC+R
Sbjct: 130 SRVVLKEQLKEVRTEISMLEQQKSQLRILVQEKIEEADILSSRIRELDSQLSKEKEECKR 189

Query: 170 IISMTKKFIKAHIRHTRLQKELLRSQVRLHKLGDQLGSDVDKPDPNEEGASINIAS 3
            IS  KKF+KAH  + ++Q+EL RSQ RL KLGDQLGS +     NEE +SINI S
Sbjct: 190 TISKIKKFVKAHKHYVQIQEELKRSQGRLQKLGDQLGSGIITTGGNEEDSSINIVS 245


>ref|XP_003540851.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Glycine max]
          Length = 417

 Score =  117 bits (292), Expect = 1e-24
 Identities = 60/116 (51%), Positives = 83/116 (71%)
 Frame = -3

Query: 350 SKEKLDEQLSYVRSEIQMLEDNKTRLKMYLEERVQEVDTLNAKIQELEVQLHKEKDECER 171
           S+  L+EQL  V S+I  L++ K +L++YL+E VQEVD+LN++I+ELE QL KE +EC+R
Sbjct: 131 SRNNLEEQLKKVDSDISTLQNRKFQLEVYLDESVQEVDSLNSRIRELEAQLCKEDEECKR 190

Query: 170 IISMTKKFIKAHIRHTRLQKELLRSQVRLHKLGDQLGSDVDKPDPNEEGASINIAS 3
           I S  +KF++ H   + LQ EL RSQVRL + GDQL SD+ +   NEE  SI+I S
Sbjct: 191 ITSRIRKFVRVHNHMSELQDELRRSQVRLQRFGDQLVSDISRIGANEEDLSIDIIS 246


>ref|XP_004144583.1| PREDICTED: zinc finger CCCH domain-containing protein 13-like
           [Cucumis sativus] gi|449493213|ref|XP_004159223.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           13-like [Cucumis sativus]
          Length = 281

 Score =  114 bits (286), Expect = 6e-24
 Identities = 56/87 (64%), Positives = 71/87 (81%)
 Frame = -3

Query: 263 LEERVQEVDTLNAKIQELEVQLHKEKDECERIISMTKKFIKAHIRHTRLQKELLRSQVRL 84
           ++E++QEVD+L +++QELE QL+KE+ EC RI S  KKF+KAH RH+RLQ EL RSQVRL
Sbjct: 1   MDEKIQEVDSLTSRVQELESQLYKERQECRRIKSKIKKFVKAHNRHSRLQDELSRSQVRL 60

Query: 83  HKLGDQLGSDVDKPDPNEEGASINIAS 3
            +LGDQLGSDV+K   NEE +SINI S
Sbjct: 61  QQLGDQLGSDVNKIGANEEDSSINIVS 87


>ref|NP_001045976.1| Os02g0161200 [Oryza sativa Japonica Group]
           gi|75259316|sp|Q6H7U2.1|C3H13_ORYSJ RecName: Full=Zinc
           finger CCCH domain-containing protein 13; Short=OsC3H13;
           AltName: Full=BRI1-kinase domain-interacting protein
           105; Short=BIP105 gi|49389245|dbj|BAD25207.1| putative
           BRI1-KD interacting protein [Oryza sativa Japonica
           Group] gi|50251275|dbj|BAD28055.1| putative BRI1-KD
           interacting protein [Oryza sativa Japonica Group]
           gi|113535507|dbj|BAF07890.1| Os02g0161200 [Oryza sativa
           Japonica Group] gi|215694419|dbj|BAG89412.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 426

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/112 (47%), Positives = 81/112 (72%)
 Frame = -3

Query: 347 KEKLDEQLSYVRSEIQMLEDNKTRLKMYLEERVQEVDTLNAKIQELEVQLHKEKDECERI 168
           KE  ++QL  +R +++ L D+KT++++ L+E++ EV  +++K+ +LEVQL +EKDEC R+
Sbjct: 149 KEDHEKQLKQIRLDMEALRDDKTQMEVILDEKIDEVRKISSKVNDLEVQLRREKDECHRM 208

Query: 167 ISMTKKFIKAHIRHTRLQKELLRSQVRLHKLGDQLGSDVDKPDPNEEGASIN 12
            S  KKFIKAH R  + Q+E+ RSQ R  +LGD L SD+ K   NEEG+S+N
Sbjct: 209 TSKMKKFIKAHARFLKAQEEVKRSQARFERLGDLLASDILKRGANEEGSSVN 260


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